EWM21779.1, cds8894 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21779.1 vs. NCBI_GenBank
Match: gi|585102114|gb|EWM21779.1| (DIX domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 555.058 bits (1429), Expect = 0.000e+0 Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0
Query: 1 MIRYYIPGDGDDASHPNIFHLPPSVQQPPRLRDVRQHFPLPGGYHFRFKTRLDGTPDKKAVWMDVTEDAAELPTFDGFYIAKVSRMRMEMPSKPTAAGSTGMSSSSSSSPTSAGYSRTSQATGPVSATRATPSASQSLPLRGNKGLVSPASDNDPFGLFHEAPPSSSTSSSFSKAPASVSGNSSAPHATTSSSHPAARGHPPHSTPGPQEMSGGSKVVAGTAAGGKGDLLDFDAFGSQPPAPSVPPMRGVPPMRGVSPPQQPQQRQTGYPSSSNATGGWM 280
MIRYYIPGDGDDASHPNIFHLPPSVQQPPRLRDVRQHFPLPGGYHFRFKTRLDGTPDKKAVWMDVTEDAAELPTFDGFYIAKVSRMRMEMPSKPTAAGSTGMSSSSSSSPTSAGYSRTSQATGPVSATRATPSASQSLPLRGNKGLVSPASDNDPFGLFHEAPPSSSTSSSFSKAPASVSGNSSAPHATTSSSHPAARGHPPHSTPGPQEMSGGSKVVAGTAAGGKGDLLDFDAFGSQPPAPSVPPMRGVPPMRGVSPPQQPQQRQTGYPSSSNATGGWM
Sbjct: 1 MIRYYIPGDGDDASHPNIFHLPPSVQQPPRLRDVRQHFPLPGGYHFRFKTRLDGTPDKKAVWMDVTEDAAELPTFDGFYIAKVSRMRMEMPSKPTAAGSTGMSSSSSSSPTSAGYSRTSQATGPVSATRATPSASQSLPLRGNKGLVSPASDNDPFGLFHEAPPSSSTSSSFSKAPASVSGNSSAPHATTSSSHPAARGHPPHSTPGPQEMSGGSKVVAGTAAGGKGDLLDFDAFGSQPPAPSVPPMRGVPPMRGVSPPQQPQQRQTGYPSSSNATGGWM 280
BLAST of EWM21779.1 vs. NCBI_GenBank
Match: gi|299116892|emb|CBN75002.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 92.0485 bits (227), Expect = 1.422e-18 Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = 0
Query: 1 MIRYYIPGDGDDASHPNIFHLPPSVQQPPRLR--DVRQHFPLPGGYHFRFKTRLDGTPDKKAVWMDVTEDAAELPTFDGFYIAKVSRM 86
MIRY+IP DGDD SHPN+F LP + +R DV +HFPLPG YHFRFK + VW+D+ + A +P+ DG + AK++R+
Sbjct: 1 MIRYFIPADGDDPSHPNVFQLPSGLVGSGSVRCGDVERHFPLPGRYHFRFKKKF----RDAFVWVDIADPGAAVPSCDGVFTAKITRL 84
BLAST of EWM21779.1 vs. NCBI_GenBank
Match: gi|953490546|emb|CEG46200.1| (apicomplexan specific region near n-terminus [Plasmopara halstedii]) HSP 1 Score: 92.4337 bits (228), Expect = 1.851e-18 Identity = 79/254 (31.10%), Postives = 114/254 (44.88%), Query Frame = 0
Query: 1 MIRYYIPGDGDDASHPNIFHLPPSVQQPPRLRDVRQHFPLPGGYHFRFKTRLDGTPDKKAVWMDVTEDAAELPTFDGFYIAKVSRMRME-MPSKPTAAGSTGMSSSSSSSPTSAGYSRTSQATGPVSATRATPSASQSLPLRGNKGLVSPASDNDPFGLFHEAPPSSSTSSSFSKAPASVSGNSSAPHATTSSSHPAARGHPPHSTPGPQEMS--------GGSKVVAGTAAGGKGDLLDFDAFGSQPPAPSVP 245
M+ Y++P DGD + H N+ LP Q RL V++ FPLPG +HFRFKT +GT VW+DV DA +P F+G I+K+SR++ E + KP + +S + + TS+A P S T+ R + V A +ND GL + PSS + + +P + NS+ P A H P P + G S G G G + F+ GS P+P P
Sbjct: 4 MLNYFVPEDGDTSDHLNVVPLPRVEQL--RLLHVKKSFPLPGDFHFRFKTAFEGT----YVWLDVVNDADPVPDFNGLVISKISRVQRESLIRKPER------TETSEAQREATDLIETSEA--PSSPTK-----------REDPKPVQKAFNNDLVGLMTDPVPSSLPQTPSAPSPTPPNTNSAPPQTARDPFDVFAGNHATPMRPAPISANMAATSVPRGLSPTTMGNHGGAYGGQVGFNPMGSGSPSPMAP 232
BLAST of EWM21779.1 vs. NCBI_GenBank
Match: gi|695415650|ref|XP_009526624.1| (hypothetical protein PHYSODRAFT_285950 [Phytophthora sojae] >gi|348677749|gb|EGZ17566.1| hypothetical protein PHYSODRAFT_285950 [Phytophthora sojae]) HSP 1 Score: 92.0485 bits (227), Expect = 2.810e-18 Identity = 43/94 (45.74%), Postives = 60/94 (63.83%), Query Frame = 0
Query: 1 MIRYYIPGDGDDASHPNIFHLPPSVQQPPRLRDVRQHFPLPGGYHFRFKTRLDGTPDKKAVWMDVTEDAAELPTFDGFYIAKVSRMRMEMPSKP 94
M+ Y++P DGD + H N+ LP Q RL+ V++ FPLPG +HFRFKT +GT VW+DV DA +P F+G I K+SRM+ E ++P
Sbjct: 4 MLNYFVPEDGDSSDHLNVVPLPRVDQL--RLQHVKKSFPLPGDFHFRFKTAFEGT----YVWLDVVNDADPVPDFNGLVICKISRMQRESSTRP 91
BLAST of EWM21779.1 vs. NCBI_GenBank
Match: gi|1214712712|gb|OWZ23639.1| (hypothetical protein PHMEG_0001443 [Phytophthora megakarya]) HSP 1 Score: 92.0485 bits (227), Expect = 3.513e-18 Identity = 43/100 (43.00%), Postives = 61/100 (61.00%), Query Frame = 0
Query: 1 MIRYYIPGDGDDASHPNIFHLPPSVQQPPRLRDVRQHFPLPGGYHFRFKTRLDGTPDKKAVWMDVTEDAAELPTFDGFYIAKVSRMRMEMPSKPTAAGST 100
M+ YY+P DGD + H N+ LP Q RL+ V++ FPLPG +HFRFKT +GT VW+DV DA +P F+G I K+SR++ + ++P T
Sbjct: 4 MLNYYVPEDGDSSDHLNVVPLPRVEQL--RLQHVKKSFPLPGAFHFRFKTAFEGT----YVWLDVVNDADPVPDFNGLVICKISRVQRQSSTRPAERTET 97
BLAST of EWM21779.1 vs. NCBI_GenBank
Match: gi|675167803|ref|XP_008892786.1| (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|566022838|gb|ETI45749.1| hypothetical protein, variant 1 [Phytophthora parasitica P1569] >gi|567960134|gb|ETK85698.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|567988857|gb|ETL39127.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568018063|gb|ETL92240.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568048497|gb|ETM45545.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568106309|gb|ETN20939.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|570326443|gb|ETO74391.1| hypothetical protein, variant 1 [Phytophthora parasitica P1976] >gi|570950315|gb|ETP15572.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >gi|570983892|gb|ETP43635.1| hypothetical protein, variant 1 [Phytophthora parasitica P10297]) HSP 1 Score: 91.6633 bits (226), Expect = 4.715e-18 Identity = 42/94 (44.68%), Postives = 60/94 (63.83%), Query Frame = 0
Query: 1 MIRYYIPGDGDDASHPNIFHLPPSVQQPPRLRDVRQHFPLPGGYHFRFKTRLDGTPDKKAVWMDVTEDAAELPTFDGFYIAKVSRMRMEMPSKP 94
M+ Y++P DGD + H N+ LP Q RL+ V++ FPLPG +HFRFKT +GT VW+DV DA +P F+G I K+SR++ E ++P
Sbjct: 4 MLNYFVPEDGDSSDHLNVVPLPRVEQL--RLQHVKKSFPLPGDFHFRFKTAFEGT----YVWLDVVNDADPVPDFNGLVICKISRVQRESSTRP 91
BLAST of EWM21779.1 vs. NCBI_GenBank
Match: gi|675167805|ref|XP_008892787.1| (hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|566022839|gb|ETI45750.1| hypothetical protein, variant 2 [Phytophthora parasitica P1569] >gi|567960135|gb|ETK85699.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|567988858|gb|ETL39128.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568018064|gb|ETL92241.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568048498|gb|ETM45546.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568106310|gb|ETN20940.1| hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >gi|570326444|gb|ETO74392.1| hypothetical protein, variant 2 [Phytophthora parasitica P1976] >gi|570950316|gb|ETP15573.1| hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1] >gi|570983893|gb|ETP43636.1| hypothetical protein, variant 2 [Phytophthora parasitica P10297] >gi|970639092|gb|KUF82331.1| hypothetical protein AM587_10007432 [Phytophthora nicotianae]) HSP 1 Score: 91.2781 bits (225), Expect = 5.629e-18 Identity = 42/94 (44.68%), Postives = 60/94 (63.83%), Query Frame = 0
Query: 1 MIRYYIPGDGDDASHPNIFHLPPSVQQPPRLRDVRQHFPLPGGYHFRFKTRLDGTPDKKAVWMDVTEDAAELPTFDGFYIAKVSRMRMEMPSKP 94
M+ Y++P DGD + H N+ LP Q RL+ V++ FPLPG +HFRFKT +GT VW+DV DA +P F+G I K+SR++ E ++P
Sbjct: 4 MLNYFVPEDGDSSDHLNVVPLPRVEQL--RLQHVKKSFPLPGDFHFRFKTAFEGT----YVWLDVVNDADPVPDFNGLVICKISRVQRESSTRP 91
BLAST of EWM21779.1 vs. NCBI_GenBank
Match: gi|301101128|ref|XP_002899653.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262103961|gb|EEY62013.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 89.7373 bits (221), Expect = 2.012e-17 Identity = 41/94 (43.62%), Postives = 60/94 (63.83%), Query Frame = 0
Query: 1 MIRYYIPGDGDDASHPNIFHLPPSVQQPPRLRDVRQHFPLPGGYHFRFKTRLDGTPDKKAVWMDVTEDAAELPTFDGFYIAKVSRMRMEMPSKP 94
M+ Y++P DGD + H N+ LP Q RL+ V++ FPLPG +HFRFKT +GT VW+DV DA +P F+G + K+SR++ E ++P
Sbjct: 1 MLNYFVPEDGDSSDHLNVVPLPRVDQL--RLQHVKKSFPLPGDFHFRFKTAFEGT----YVWLDVVNDADPVPDFNGLVVCKISRVQRESSTRP 88
BLAST of EWM21779.1 vs. NCBI_GenBank
Match: gi|325186914|emb|CCA21458.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 88.1965 bits (217), Expect = 7.814e-17 Identity = 38/87 (43.68%), Postives = 59/87 (67.82%), Query Frame = 0
Query: 1 MIRYYIPGDGDDASHPNIFHLPPSVQQPPRLRDVRQHFPLPGGYHFRFKTRLDGTPDKKAVWMDVTEDAAELPTFDGFYIAKVSRMR 87
M+ Y+IP DGD + H N+ LP Q L+ V+++FPLPG +HFRFKT+ +GT VW+D+T+ +P++DG ++K+SR+R
Sbjct: 4 MLNYFIPEDGDTSDHMNVVPLPAVDQL--TLKHVKENFPLPGDFHFRFKTQFEGT----YVWLDLTDGNDVVPSYDGIIVSKISRIR 84
BLAST of EWM21779.1 vs. NCBI_GenBank
Match: gi|855314145|ref|XP_012898418.1| (uncharacterized protein [Blastocystis hominis] >gi|300176705|emb|CBK24370.2| unnamed protein product [Blastocystis hominis]) HSP 1 Score: 85.5001 bits (210), Expect = 1.125e-16 Identity = 37/85 (43.53%), Postives = 52/85 (61.18%), Query Frame = 0
Query: 2 IRYYIPGDGDDASHPNIFHLPPSVQQPPRLRDVRQHFPLPGGYHFRFKTRLDGTPDKKAVWMDVTEDAAELPTFDGFYIAKVSRM 86
+ YYIP DGD+A HPN+ L + Q L+D+R+ FP+PG Y+FRFK + +W DVTED+ +P FDG K +R+
Sbjct: 7 VLYYIPEDGDEADHPNVMTLDKNASQ-VTLKDIREAFPIPGTYYFRFKRTFKNS----WIWFDVTEDSEVVPKFDGLIFVKATRL 86 The following BLAST results are available for this feature:
BLAST of EWM21779.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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