EWM21777.1, cds8893 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21777.1 vs. NCBI_GenBank
Match: gi|585102112|gb|EWM21777.1| (Protein of unknown function DUF179 [Nannochloropsis gaditana]) HSP 1 Score: 555.829 bits (1431), Expect = 0.000e+0 Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0
Query: 1 MPFTLSLILGLSFLVQSTSISAFHHLHSSIQLLEGSRAQRRGRRSTTLSLDKPLLAEGINIRSLPAGVPPALQQGQILVAKPWEYNHFTSKSCLFLYKHDSETGSRGVVLEKPTAFTLSELAPPFAASVFANHTVFLGGEQGGDMAVLLHPYKHVPGVRSVGGGLYYGGLSGAEAMFKEQEENKAEHGLDRSQFKWWFNYMSWGPGQLEDQEGQGGRASVAGGTPPPSPTRVSHGTPRPHANQTKPLVCRNWRVNAFVGTQRKIEYMRGP 270
MPFTLSLILGLSFLVQSTSISAFHHLHSSIQLLEGSRAQRRGRRSTTLSLDKPLLAEGINIRSLPAGVPPALQQGQILVAKPWEYNHFTSKSCLFLYKHDSETGSRGVVLEKPTAFTLSELAPPFAASVFANHTVFLGGEQGGDMAVLLHPYKHVPGVRSVGGGLYYGGLSGAEAMFKEQEENKAEHGLDRSQFKWWFNYMSWGPGQLEDQEGQGGRASVAGGTPPPSPTRVSHGTPRPHANQTKPLVCRNWRVNAFVGTQRKIEYMRGP
Sbjct: 1 MPFTLSLILGLSFLVQSTSISAFHHLHSSIQLLEGSRAQRRGRRSTTLSLDKPLLAEGINIRSLPAGVPPALQQGQILVAKPWEYNHFTSKSCLFLYKHDSETGSRGVVLEKPTAFTLSELAPPFAASVFANHTVFLGGEQGGDMAVLLHPYKHVPGVRSVGGGLYYGGLSGAEAMFKEQEENKAEHGLDRSQFKWWFNYMSWGPGQLEDQEGQGGRASVAGGTPPPSPTRVSHGTPRPHANQTKPLVCRNWRVNAFVGTQRKIEYMRGP 270
BLAST of EWM21777.1 vs. NCBI_GenBank
Match: gi|397645614|gb|EJK76913.1| (hypothetical protein THAOC_01294 [Thalassiosira oceanica]) HSP 1 Score: 90.1225 bits (222), Expect = 7.944e-18 Identity = 58/162 (35.80%), Postives = 87/162 (53.70%), Query Frame = 0
Query: 61 IRSLPAGVPPALQQGQILVAKPWEYNHFTSKSCLFLY-----KHDSETGSRGVVLEKPTAFTLSELAPPFAASVFANHTVFLGGEQGGDMAVLLHPYKHVPG-VRSVG-----GGLYYGGLSGAEAMFKEQEENKAEHGL-DRSQFKWWFNYMSWGPGQLED 210
IR L G ++ G +LV+ +E++HF +S +F+Y ET R VV++ PTAF + E++P S AN+T+F GG G D +LLH + G V + G G+Y GG+S + + + GL D SQ K++FNYM +G QL+D
Sbjct: 51 IRFLGRGDDAIIRPGSVLVSPSFEFDHFLMRSAIFVYAIGEDDQQDETIIRAVVIDHPTAFDIGEMSPT-VTSRLANNTLFRGGYDGSDAVMLLHSAGGMDGSVETTGSEIGCSGIYEGGISSI--------QKQVDAGLIDPSQCKFFFNYMEFGLKQLDD 203
BLAST of EWM21777.1 vs. NCBI_GenBank
Match: gi|551670232|ref|XP_005837874.1| (hypothetical protein GUITHDRAFT_103478 [Guillardia theta CCMP2712] >gi|428182032|gb|EKX50894.1| hypothetical protein GUITHDRAFT_103478 [Guillardia theta CCMP2712]) HSP 1 Score: 86.2705 bits (212), Expect = 1.170e-15 Identity = 51/143 (35.66%), Postives = 80/143 (55.94%), Query Frame = 0
Query: 71 ALQQGQILVAKPWEYNHFTSKSCLFLYKHDSETGSRGVVLEKPTAFTLSELAP-PFAASVFANHTVFLGGEQGGDMAVLLHPYKHVPGVRSVGG-GLYYGGLSGAEAMFKEQEENKAEHGLDRSQFKWWFNYMSWGPGQLEDQ 211
+++ G +LVA P E +HF + + L +H S+ GS+GVVLE TAF L E+AP F +++F GG G D ++LH + V + +G G++ GG+ +E +E +E Q K++FN+ W PGQLE +
Sbjct: 116 SVEPGCVLVASPEEVDHFFRHAVVLLLEH-SDGGSKGVVLEMATAFMLQEMAPAAFLEHPLGENSLFRGGSSGNDKVIMLHALEDVQTSKPIGRHGVFAGGM-------QEVKELVSEGRASSDQVKFFFNHCEWLPGQLERE 250
BLAST of EWM21777.1 vs. NCBI_GenBank
Match: gi|298711783|emb|CBJ32813.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 80.8777 bits (198), Expect = 7.993e-15 Identity = 52/154 (33.77%), Postives = 85/154 (55.19%), Query Frame = 0
Query: 63 SLPAGVPPALQQGQILVAKPWEYNHFTSKSCLFLYKHDSETGSRGVVLEKPTAFTLSELAPPFAASVFANHTVFLGGEQGGDMAVLLHPYKHVPGVRSVGG-GLYYGGLSGAEAMFKEQEENKAEHGLDRSQFKWWFNYMSWGPGQLEDQEGQG 215
S + L+ G +LVA Y T K+ +Y+H SR V ++K FT+ E++ + +N+ +F GG+ GG+ A+++HP+ + G R +G GL+ GG A + EENKA+ G FK++FN++SW G L++Q G+G
Sbjct: 17 SFEVELDRGLEIGSVLVAGADNYGSMTFKAVALVYEHGEGGPSRAVCVDKGLDFTIGEMSTGDLGPL-SNNRLFRGGDDGGEAAIMIHPH-DIMGSRPLGDTGLFVGGFVTALDLV---EENKAKPG----DFKFFFNHLSWPAGALQEQVGKG 161
BLAST of EWM21777.1 vs. NCBI_GenBank
Match: gi|219130429|ref|XP_002185368.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403082|gb|EEC43037.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 73.559 bits (179), Expect = 1.006e-11 Identity = 48/158 (30.38%), Postives = 82/158 (51.90%), Query Frame = 0
Query: 61 IRSLPAGVPPALQQGQILVAKPWEYNHFTSKSCLFLY----KHDSETGSRGVVLEKPTAFTLSELA---PPFAASVFANHTVFLGGEQGGDMAVLLHPYKHVPGVRSVG-GGLYYGGLSGAEAMFKEQEENKAEHGLDRSQFKWWFNYMSWGPGQLED 210
+R L G ++ G +L+A EY+H+ ++ +F++ D RGV+L++PT FTL E+ P + ++ +F GG++GGD VLLH ++ + G S+G G++ GG A A ++ S FK +FNY + ++ED
Sbjct: 64 VRFLGKGERAIVRPGVVLLAPTNEYHHYYRQAAIFVHAMGEDDDDVYVIRGVILDQPTPFTLGEMMEHNPALQKTPLKDNLLFRGGDKGGDQVVLLHNHEEI-GQSSIGVSGVFQGGFDQAMAACEKGHRQT-------SDFKLFFNYCEFTELEMED 213
BLAST of EWM21777.1 vs. NCBI_GenBank
Match: gi|922855463|gb|KOO23911.1| (hypothetical protein Ctob_001926 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 73.559 bits (179), Expect = 2.323e-11 Identity = 41/134 (30.60%), Postives = 71/134 (52.99%), Query Frame = 0
Query: 75 GQILVAKPWEYNHFTSKSCLFLYKHDSETGSRGVVLEKPTAFTLSELAPPFAASVFANHTVFLGGEQGGDMAVLLHPYKHVPGVRSVGGGLYYGGLSGAEAMFKEQEENKAEHGLDRSQFKWWFNYMSWGPGQL 208
G +++A P ++H+ +S + + +H + G++GV+L T +T+ +LAP + FA + VFLGG+ G D ++H +PG VG G+Y GG+ A E L +FK+++ + W P L
Sbjct: 26 GSVILAHPGSFDHYFLESLVLILEHGPD-GTKGVLLNHETPWTVEDLAPDAKMAPFAANAVFLGGDAGRDTITMVHGEFELPGAVEVGQGVYTGGVDAALRAV-------TEGALPPDRFKFFYKSVEWLPNAL 151
BLAST of EWM21777.1 vs. NCBI_GenBank
Match: gi|545365466|ref|XP_005647700.1| (DUF179-domain-containing protein [Coccomyxa subellipsoidea C-169] >gi|384249675|gb|EIE23156.1| DUF179-domain-containing protein [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 69.3218 bits (168), Expect = 3.064e-10 Identity = 53/201 (26.37%), Postives = 93/201 (46.27%), Query Frame = 0
Query: 19 SISAFHHLHSSIQLLEGSRAQRRGRRSTTLSLDKPLLAEGINIRSLPAGVPPALQQGQILVAKPWEYN---HFTSKSCLFLYKHDSETGSRGVVLEKPTAFTLSELAPPFA-ASVFANHTVFLGGEQGGDMAVLLHPYKHVPGVRSVGGGLYYGGLSGAEAMFKEQEENKAEHGLDRSQFKWWFNYMSWGPGQLEDQEGQG 215
S+ A +H L SR + +ST + L A IN ++G +L+A P + + +++ +F+++H SE GS G++L KPT +T+ ++ A F N+ +FLGG+ + +LH + +P + G+ GG A+A + + + FKW+ Y WG GQL+ + G
Sbjct: 4 SLVAGTEVHKVAPLHRESRRKGVSEKSTEPDEESKLWAHSINFP----------EKGCLLIAHPLVFTTQQQYFAQAVIFIFEH-SEQGSAGLILNKPTQYTIGTMSGLEALCPEFNNNGLFLGGDVSPNSMHMLHCHGQLPEAVEIIRGINMGGFDAAKAAVSQGR-------MPATDFKWFTRYSGWGAGQLQRECASG 186
BLAST of EWM21777.1 vs. NCBI_GenBank
Match: gi|953250687|emb|CUS37391.1| (conserved exported hypothetical protein [Candidatus Nitrospira nitrosa]) HSP 1 Score: 68.1662 bits (165), Expect = 3.722e-10 Identity = 47/158 (29.75%), Postives = 76/158 (48.10%), Query Frame = 0
Query: 68 VPPALQQGQILVAKPWEYNHFTSKSCLFLYKHDSETGSRGVVLEKPTAFTLSELAPPFAASVFANHTVFLGGEQGGDMAVLLHPYKH-VPGVRSVGGGLYYGGLSGAEAMFKEQEENKAEHGLDRSQFKWWFNYMSWGPGQLEDQEGQGGRASVAGGT 224
VP +Q+G +LVA P + +++ LF+ +H + G+ G+VL +PT L+E+ NH +F GG G VLL K +P R + G+Y G E + + N+A F+ + + W PGQLE + +G ++ GT
Sbjct: 29 VPSPVQKGSLLVASPSLSDPNFTRTVLFIVEH-GQGGTIGLVLNRPTDVLLAEVLQDLPVLKQTNHRLFAGGPVGRTQLVLLFRLKQLLPDARHIANGIYVGTPMVLERVIAGLKPNEA--------FRAFAGFAGWAPGQLESEMREGSWGVLSSGT 177
BLAST of EWM21777.1 vs. NCBI_GenBank
Match: gi|676397867|ref|XP_009042211.1| (hypothetical protein AURANDRAFT_68309, partial [Aureococcus anophagefferens] >gi|323447142|gb|EGB03088.1| hypothetical protein AURANDRAFT_68309, partial [Aureococcus anophagefferens]) HSP 1 Score: 70.4774 bits (171), Expect = 4.489e-10 Identity = 43/136 (31.62%), Postives = 68/136 (50.00%), Query Frame = 0
Query: 75 GQILVAKPWEYNHFTSKSCLFLYKHDSETGSRGVVLEKPTAFTLSELAPPFAASVFANHTVFLGGEQGGDMAVLLHPYKHVPGVRSVGG-GLYYGGLSGAEAMFKEQEENKAEHGLDRSQFKWWFNYMSWGPGQLE 209
G ++ A EY+HF +S + + +H S G+ LE PT T+ E A + +F+GG+ GG A+++H V G +G GLY GG+ A A ++ + D FK++FN + PGQL+
Sbjct: 867 GVVVTAPVKEYDHFLRQSAVLVIEHGDGAPSYGLNLESPTMMTIGEAAAGVVTGPLGENQLFMGGQHGGRGAMMVHATPGVAGATRLGDTGLYIGGIKDAMARV-----DRGDAACD--DFKFFFNLXQFPPGQLD 995
BLAST of EWM21777.1 vs. NCBI_GenBank
Match: gi|1088941941|emb|SEE66351.1| (putative transcriptional regulator [Tenacibaculum sp. MAR_2010_89]) HSP 1 Score: 66.6254 bits (161), Expect = 1.050e-9 Identity = 42/140 (30.00%), Postives = 69/140 (49.29%), Query Frame = 0
Query: 73 QQGQILVAKPWEYNHFTSKSCLFLYKHDSETGSRGVVLEKPTAFTLSELAPPFAASVFANHTVFLGGEQGGDMAVLLHPY-KHVPGVRSVGGGLYYGGLSGAEAMFKEQEENKAEHGLDRSQFKWWFNYMSWGPGQLEDQ 211
Q+G++L+A+P N + K + L SET S G +L +P +TLS+L P + + TV+ GG D +H + +P V G+Y+GG F +E+ H + S +++ Y W P QL+D+
Sbjct: 7 QKGRLLIAEPSILNDNSFKRAIVLLTEHSETSSVGFILNRPLHYTLSDLVP----DINCDFTVYQGGPVEQDNLYFIHKIPELLPNSVEVTDGIYWGG------NFNYLKEHLNNHKVKPSDIRFFLGYSGWEPTQLDDE 136 The following BLAST results are available for this feature:
BLAST of EWM21777.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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