EWM21803.1, cds8883 (CDS) Nannochloropsis gaditana

Overview
NameEWM21803.1
Unique Namecds8883
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:464190..464292 +
Alignment locationKK037250.1:464624..464709 +
Alignment locationKK037250.1:464881..465107 +
Alignment locationKK037250.1:465207..465381 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21803.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100065g7.7394.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:464190..464292 +
KK037250.1supercontigKK037250.1:464624..464709 +
KK037250.1supercontigKK037250.1:464881..465107 +
KK037250.1supercontigKK037250.1:465207..465381 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21803.1 vs. NCBI_GenBank
Match: gi|585102139|gb|EWM21803.1| (hypothetical protein Naga_100065g7 [Nannochloropsis gaditana])

HSP 1 Score: 402.905 bits (1034), Expect = 3.263e-142
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0 
Query:    1 MKMVRLLAVLVVAGTACVSAFMPVLPATRVLQQQARPLVAPLEMAKHPQFKIIKKKMHKRPKKSNASDRNRGGHSTHPVDQRDMSGPGWLFPDQEGWVPYDESVHGPLDEEMKELTEGLDPIWVRIVDPTTGEPKLEDAARRCGGGRGKDHPLEIFLCAHVHVDGPGYDTREGAGTQGDLVSAGDGVEGTDETQKE 196
            MKMVRLLAVLVVAGTACVSAFMPVLPATRVLQQQARPLVAPLEMAKHPQFKIIKKKMHKRPKKSNASDRNRGGHSTHPVDQRDMSGPGWLFPDQEGWVPYDESVHGPLDEEMKELTEGLDPIWVRIVDPTTGEPKLEDAARRCGGGRGKDHPLEIFLCAHVHVDGPGYDTREGAGTQGDLVSAGDGVEGTDETQKE
Sbjct:    1 MKMVRLLAVLVVAGTACVSAFMPVLPATRVLQQQARPLVAPLEMAKHPQFKIIKKKMHKRPKKSNASDRNRGGHSTHPVDQRDMSGPGWLFPDQEGWVPYDESVHGPLDEEMKELTEGLDPIWVRIVDPTTGEPKLEDAARRCGGGRGKDHPLEIFLCAHVHVDGPGYDTREGAGTQGDLVSAGDGVEGTDETQKE 196
The following BLAST results are available for this feature:
BLAST of EWM21803.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102139|gb|EWM21803.1|3.263e-142100.00hypothetical protein Naga_100065g7 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8913rna8913Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications