EWM21788.1, cds8878 (CDS) Nannochloropsis gaditana

Overview
NameEWM21788.1
Unique Namecds8878
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:452390..452563 +
Alignment locationKK037250.1:452618..452723 +
Alignment locationKK037250.1:452788..452863 +
Alignment locationKK037250.1:452949..453003 +
Alignment locationKK037250.1:453049..453303 +

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Properties
Property NameValue
Protein idEWM21788.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100065g13.7379.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:452390..452563 +
KK037250.1supercontigKK037250.1:452618..452723 +
KK037250.1supercontigKK037250.1:452788..452863 +
KK037250.1supercontigKK037250.1:452949..453003 +
KK037250.1supercontigKK037250.1:453049..453303 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21788.1 vs. NCBI_GenBank
Match: gi|585102124|gb|EWM21788.1| (hypothetical protein Naga_100065g13 [Nannochloropsis gaditana])

HSP 1 Score: 446.047 bits (1146), Expect = 1.720e-158
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0 
Query:    1 MRKRRLSRWVPWCRLVTPCGVVISQYARTKVGIHVERIMWESGKIARLKWRCTGTYSTVWVRIEARRALQKGRRLVGAVVAIHLIECRGRRRMWQDRSKGRRTGLESETTIGLEVLHGRGVVRKHVETCLKFTGLDAWQTRRSKKEQKSRHQQCETSQGYHGGGKEVVLPWAPPTLPQETLQSKTSTSHRYAELARVVSDSFSCTFFACHLQSACTRCGRP 221
            MRKRRLSRWVPWCRLVTPCGVVISQYARTKVGIHVERIMWESGKIARLKWRCTGTYSTVWVRIEARRALQKGRRLVGAVVAIHLIECRGRRRMWQDRSKGRRTGLESETTIGLEVLHGRGVVRKHVETCLKFTGLDAWQTRRSKKEQKSRHQQCETSQGYHGGGKEVVLPWAPPTLPQETLQSKTSTSHRYAELARVVSDSFSCTFFACHLQSACTRCGRP
Sbjct:    1 MRKRRLSRWVPWCRLVTPCGVVISQYARTKVGIHVERIMWESGKIARLKWRCTGTYSTVWVRIEARRALQKGRRLVGAVVAIHLIECRGRRRMWQDRSKGRRTGLESETTIGLEVLHGRGVVRKHVETCLKFTGLDAWQTRRSKKEQKSRHQQCETSQGYHGGGKEVVLPWAPPTLPQETLQSKTSTSHRYAELARVVSDSFSCTFFACHLQSACTRCGRP 221
The following BLAST results are available for this feature:
BLAST of EWM21788.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102124|gb|EWM21788.1|1.720e-158100.00hypothetical protein Naga_100065g13 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8908rna8908Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications