EWM21790.1, cds8876 (CDS) Nannochloropsis gaditana

Overview
NameEWM21790.1
Unique Namecds8876
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:446636..448534 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21790.1
ProductDynactin p62
Orig transcript idgnl|cribi|Naga_100065g15.7381.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:446636..448534 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
GO:0005869dynactin complex
Vocabulary: INTERPRO
TermDefinition
IPR008603DCTN4
Homology
BLAST of EWM21790.1 vs. NCBI_GenBank
Match: gi|585102126|gb|EWM21790.1| (Dynactin p62 [Nannochloropsis gaditana])

HSP 1 Score: 1295.8 bits (3352), Expect = 0.000e+0
Identity = 632/632 (100.00%), Postives = 632/632 (100.00%), Query Frame = 0
Query:    1 MALNAERLLRPLFPSQNHDDRILDNDYGTNEGVSDVKVVFTDYQGWWAPLTHLFYSNASQCLVSAHPESSIEEVESFYCSHCLNYFADAEAASSYHRCPRCFDCPQCTSALLIISVDEESNHEENDAGYTFRCGYCRWSSADSIGLIESTPEALIERLKKTELDDPQAVRYRALLQHLRQRAVAIARARRHHDRQYLLSAPFALPTENELDSLGVGPVRARARWHLSDLEEKEDRGQAARTRATDGKETAYLSTLLTEEKMGTKTAADACSFSAEDVDRAPASWVTLRTLSPRGPSSQTASRSLYPPLTSHSRPRRRPLCTKRVRRCRQDVEAGRPGILLKPKVNPLEGDSSWTGTAGKWWQKDSSAIHVLPSVSVIRAQGLEKVFAGRARATGVTGGGGQESDADARQWAKSHFAGTGDDPEALSFVLRLRNPLRGAVQVVLVPPPATSEGAGATTELYYLRRLPVALGGDVNSSRNVGNVLYARVSCAGAEQAVAGEAVDLEAFEDDLLEEEEEGEDQESLDALALRLLDGDTKMKREEGAQEVSATRVLLRRKSRAWLHVKVPVPTAPLVLNKDAAVGVLLFLRFLSHRSELSNNRKEPAFITVPVCLAFTRDSKSSDSCHDVDRCTKH 632
            MALNAERLLRPLFPSQNHDDRILDNDYGTNEGVSDVKVVFTDYQGWWAPLTHLFYSNASQCLVSAHPESSIEEVESFYCSHCLNYFADAEAASSYHRCPRCFDCPQCTSALLIISVDEESNHEENDAGYTFRCGYCRWSSADSIGLIESTPEALIERLKKTELDDPQAVRYRALLQHLRQRAVAIARARRHHDRQYLLSAPFALPTENELDSLGVGPVRARARWHLSDLEEKEDRGQAARTRATDGKETAYLSTLLTEEKMGTKTAADACSFSAEDVDRAPASWVTLRTLSPRGPSSQTASRSLYPPLTSHSRPRRRPLCTKRVRRCRQDVEAGRPGILLKPKVNPLEGDSSWTGTAGKWWQKDSSAIHVLPSVSVIRAQGLEKVFAGRARATGVTGGGGQESDADARQWAKSHFAGTGDDPEALSFVLRLRNPLRGAVQVVLVPPPATSEGAGATTELYYLRRLPVALGGDVNSSRNVGNVLYARVSCAGAEQAVAGEAVDLEAFEDDLLEEEEEGEDQESLDALALRLLDGDTKMKREEGAQEVSATRVLLRRKSRAWLHVKVPVPTAPLVLNKDAAVGVLLFLRFLSHRSELSNNRKEPAFITVPVCLAFTRDSKSSDSCHDVDRCTKH
Sbjct:    1 MALNAERLLRPLFPSQNHDDRILDNDYGTNEGVSDVKVVFTDYQGWWAPLTHLFYSNASQCLVSAHPESSIEEVESFYCSHCLNYFADAEAASSYHRCPRCFDCPQCTSALLIISVDEESNHEENDAGYTFRCGYCRWSSADSIGLIESTPEALIERLKKTELDDPQAVRYRALLQHLRQRAVAIARARRHHDRQYLLSAPFALPTENELDSLGVGPVRARARWHLSDLEEKEDRGQAARTRATDGKETAYLSTLLTEEKMGTKTAADACSFSAEDVDRAPASWVTLRTLSPRGPSSQTASRSLYPPLTSHSRPRRRPLCTKRVRRCRQDVEAGRPGILLKPKVNPLEGDSSWTGTAGKWWQKDSSAIHVLPSVSVIRAQGLEKVFAGRARATGVTGGGGQESDADARQWAKSHFAGTGDDPEALSFVLRLRNPLRGAVQVVLVPPPATSEGAGATTELYYLRRLPVALGGDVNSSRNVGNVLYARVSCAGAEQAVAGEAVDLEAFEDDLLEEEEEGEDQESLDALALRLLDGDTKMKREEGAQEVSATRVLLRRKSRAWLHVKVPVPTAPLVLNKDAAVGVLLFLRFLSHRSELSNNRKEPAFITVPVCLAFTRDSKSSDSCHDVDRCTKH 632          
BLAST of EWM21790.1 vs. NCBI_GenBank
Match: gi|698816774|ref|XP_009841416.1| (hypothetical protein H257_15118 [Aphanomyces astaci] >gi|574103623|gb|ETV69163.1| hypothetical protein H257_15118 [Aphanomyces astaci])

HSP 1 Score: 125.176 bits (313), Expect = 4.978e-27
Identity = 100/337 (29.67%), Postives = 151/337 (44.81%), Query Frame = 0
Query:   49 PLTHLFYSNASQCLVSAHPESSIEEVESFYCSHCLNYFADAEAASSYHRCPRCFDCPQCTSALLIISVDEESNHEENDAGYTFRCGYCRWSSADSIGLIESTPEALIERLKKTELDDPQAVRYRALLQHLRQRAVAIARARRHHDRQYLLSAPFALPTENELDSLGVGPVRA-RARWHLSDLEEKEDRGQAARTRATDGKETAYLSTLLTEEKMGTKTAADACSFSAEDVDRAPASWVTLRTLSPRGPSSQTASRSLYPPL-----TSHSRPRRRPLCTKRVRRCRQDVEAGRPGILLKPKVNPLEGDSSWTGTAGKWWQKDSSAIHVLPSVSVIRA 379
            PL  L++S+  + +V   P  S++E++S++C   ++     EAA+  +R  R F CP C S L  I  D+          YTF C +CRW S DSI L +  P+ L+      E ++     +  LL H +QRA   A+    H R ++    F   + +        P  A +  W + +L+ K     +  + A D        T L E+        +  SF   D  RA                S  A R+L  PL      S   P R  L  KR  RC + + +G PGIL+KP++NP+ GDSS       WW+K + A+H+LPSV++ R 
Sbjct:   14 PLAELYWSDTCKKIVCPWPTCSLQEIDSYFCRFQMDNLPSKEAAAYKNRSARTFACPDCRSTLQTIKHDK----------YTFFCAHCRWDS-DSIQLTDEDPDTLMMVANTREREEHV---FDVLLAHYQQRAA--AQTSIQHTRSFMSKRSFTSASSSRFIKYSQRPPPAMQLGWKMENLDAKLKDTLSTVSSAVD--------TALVEQCRQKFPHHE--SFHGIDAVRA-------AQCDDMAAVSTLAQRNLCTPLLQSRDVSALFPSRPDLRVKRSWRCVESMASGAPGILVKPQINPMTGDSSMV-VGASWWKKATLALHMLPSVTIRRV 316          
BLAST of EWM21790.1 vs. NCBI_GenBank
Match: gi|673040697|ref|XP_008874309.1| (hypothetical protein H310_09887 [Aphanomyces invadans] >gi|574470051|gb|ETV97063.1| hypothetical protein H310_09887 [Aphanomyces invadans])

HSP 1 Score: 122.094 bits (305), Expect = 6.342e-26
Identity = 100/333 (30.03%), Postives = 152/333 (45.65%), Query Frame = 0
Query:   49 PLTHLFYSNASQCLVSAHPESSIEEVESFYCSHCLNYFADAEAASSYHRCPRCFDCPQCTSALLIISVDEESNHEENDAGYTFRCGYCRWSSADSIGLIESTPEALIERLKKTELDDPQAVRYRALLQHLRQRAVAIARARRHHDRQYLLSAPFALPTENEL-DSLGVGPVRARAR-WHLSDLEEKEDRGQAARTRATDGKETAYLSTLLTE-EKMGTKTAADACSFSAEDVDRAPASWVTLRTLSPRGPSSQTASRSLYPPLTSHSRPRRRPLCTKRVRRCRQDVEAGRPGILLKPKVNPLEGDSSWTGTAGKWWQKDSSAIHVLPSVSVIR 378
            PL  L++S+  + +V   P  S++E++S++C   ++     EAA+  +R  R F CP C S L  I  D+          Y F C +CRW S DSI L +  P+ L+      E ++     +  LL H +Q+A   +       R     +   + +   L  SL         R W + DLE K     +    A D          + + E+  +  A  A    A+  D A  S +  R L      S+  S +L+P     SRP  R    KR  RC + + +G PGIL+KP++NP+ GDSS    A  WW+K S AIHV+PS+++ R
Sbjct:   14 PLAELYWSDTCKKIVCPWPTCSLQEIDSYFCRFQMDNLPSKEAATYKNRSARTFACPDCKSTLQTIKHDK----------YMFFCAHCRWDS-DSIQLTDEDPDTLMMVANTREREEHV---FDVLLSHYQQKAAQTSGPHHTGTRSTSKRSVTTVSSSRFLKQSLANRKQSVLQRNWKMEDLEMKLKETLSTAASAVDATLVEKCRLKVPQHERFHSVDAVKA----AQTHDMAVVSTLAQRNLCTPLLQSRDVS-ALFP-----SRPDLR---VKRSWRCVESMASGAPGILVKPQINPMTGDSSMV-VAASWWKKASLAIHVVPSITIRR 318          
BLAST of EWM21790.1 vs. NCBI_GenBank
Match: gi|1072227682|gb|OEU12421.1| (hypothetical protein FRACYDRAFT_244689 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 119.013 bits (297), Expect = 1.354e-24
Identity = 119/368 (32.34%), Postives = 171/368 (46.47%), Query Frame = 0
Query:   38 VVFTDYQGWWAPLTHLFYSNASQCLVSAHPE---SSIEEVESFYCSHCLNYFADAEAASSYHRCPR--CFDCPQCTSALLIISVDEESNHEENDAGYTFRCGYCRWSS-----------ADSIGLI--ESTPEALIERLK--KTELDDPQAVRYRALLQH---LRQRAVAIARARRHHDR------QYLLSAPFALPTENELDSLGVGPVRARARWHLSDLEEKEDRGQAARTRATDGKETAYLSTLLTEEKMGTKTAADACSFSAEDVDRAPASWVTLRTLSPRGPSSQTASRSLYPPLTSHSRPRRRPLCTKRVRRCRQDVEAGRPGILLKPKVNPLEGDSSWTGTAGKWWQKDSSAIHVLPSVSV 376
            V++ D+QG  APL+  +++ AS+ L S+      SSI EV+S YC  CL+ F DA  AS+   CP+  C  CP C S   I +          D+   ++CG C W+S           ++  G I  E    A IE L   K+ +++    R R+   H   +++  + IA+      R      +Y   AP      NE D L V        W +  LE+ +      RTR     E  ++S++ +E   GT     +     E+ D  P    + + LS     SQ    +L P       P   PL  ++ RRCR ++   RPGIL+KPK+NPLEGDSS     G+WW+KDSSAI VLP V V
Sbjct:   10 VLYVDHQGHPAPLSLCYHATASRKLTSSVDRPFPSSITEVDSAYCPQCLS-FHDANTASNLGFCPKATCQLCPLCRSVSSITA---------KDSICFYQCGRCDWNSKICDIQTSLVTSNDNGNISLEEVENASIELLSQYKSRIEE----RNRSADDHFNSMQKTLIGIAKDHVKGRRSTTSSGRYFSQAPVT--KRNENDDLKV--------WSVQALEDSQ------RTR-----EENFISSI-SEPTGGTHIERISLDAGEEEDDDEPLFHPSFQLLSTEIILSQENGGNL-PGSLETLLPHPIPLRPRKSRRCRAEIAESRPGILVKPKLNPLEGDSSLRTGHGQWWKKDSSAIEVLPRVRV 340          
BLAST of EWM21790.1 vs. NCBI_GenBank
Match: gi|325181250|emb|CCA15664.1| (conserved hypothetical protein [Albugo laibachii Nc14] >gi|325181817|emb|CCA16272.1| conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 117.857 bits (294), Expect = 2.153e-24
Identity = 96/349 (27.51%), Postives = 152/349 (43.55%), Query Frame = 0
Query:   45 GWWAPLTHLFYSNASQCLVSAHPESSIEEVESFYCSHCLNYFADAEAASSYHRCPRCFDCPQCTSALLIISVDEESNHEENDAGYTFRCGYCRWSSADSIGLIESTPEALIERLKKTELDDPQAVRYRALLQHLRQRAVAIARARRHHDR------QYLLSAPF-ALPTENELDSLGVGPVRARARWHLSDLEEK--------EDRGQAARTRATDGKETAYLSTLLT-EEKMGTKTAADACSFSAEDVDRAPASWVTLRTLSPRGPSSQTASRSLYPPLTSHSRPRRRPLCTKRVRRCRQDVEAGRPGILLKPKVNPLEGDSSWTGTAGKWWQKDSSAIHVLPSVSVI 377
            G   PL+ LFYS     +V      S++E ES+YC++ L  F   EA    +R  R F C  CTS L  +        +E    Y F C +CRW SA ++ L+E  P+ L+      E ++PQ   + AL+   +    +      H+DR          SA F  L  ++E   + +     R  W +  L E         ED  +  +    D + ++Y  T+    ++   K        S    D +  S +  R L+P           +YP      RPR R   TK+  RC + ++ G  GIL+KP+++PL GDSS     G W++K + A+H +P ++ +
Sbjct:   16 GEMVPLSLLFYSTLCHKIVCRKSCCSVQEFESYYCANLLLNFPSKEANMYQNRSSRSFACATCTSILSTV-------FDETIQKYYFLCPHCRWDSASTVNLMEDDPDLLLMSTIARERENPQEDIFNALISFHQSNMQSSMENPTHYDRDRHSFASEKRSASFLGLQRDHEKVQMRLKKSFERGVWRMELLMEHVEDRQKHLEDAWKEIQCNELDQRLSSYAKTVTNASDEQNLKHIGSLAQLS----DMSAFSNLKQRFLAPLEQYRNVV--DMYP-----IRPRLR---TKKTWRCVESIKKGSAGILVKPQISPLSGDSS-LPVPGTWFKKATLAVHHIPMITFV 342          
BLAST of EWM21790.1 vs. NCBI_GenBank
Match: gi|1173941052|gb|OQR90302.1| (hypothetical protein ACHHYP_05640 [Achlya hypogyna])

HSP 1 Score: 115.161 bits (287), Expect = 9.075e-24
Identity = 101/335 (30.15%), Postives = 150/335 (44.78%), Query Frame = 0
Query:   49 PLTHLFYSNASQCLVSAHPESSIEEVESFYCSHCLNYFADAEAASSYHRCPRCFDCPQCTSALLIISVDEESNHEENDAGYTFRCGYCRWSSADSIGLIESTPEALIERLKKTELDDPQAVRYRALLQHLRQRAVAIARARRHHDRQYLLSAPFALPTENELDSLGVGPVRARAR----WHLSDLEEK-EDRGQAARTRATDGKETAYLSTLLTEEKMGTKTAADACSFSAEDVDRAPASWVTLRTLSPRGPSSQTASRSLYPPLTSHSRPRRRPLCTKRVRRCRQDVEAGRPGILLKPKVNPLEGDSSWTGTAGKWWQKDSSAIHVLPSVSVIR 378
            PL  L++S++   LV   P  S++E++S++C   ++     EAA+  +R  R F CP C S L  I   ++         Y F C +CRW SA+   L +  P+ L       E D+     +  LL H +Q++ A   A         L  P A    N L  LG      +A     W +  LE K + R +       D K  A +     + +      A A +  A   D +  S +  R LS     S+  +  LYP     SRP  R    KR  RC + + A  PGIL+KP++NP+ GDSS   +A  WW+K +  IH +P+V+V R
Sbjct:   14 PLAELYWSDSCSKLVCPWPTCSLQEIDSYFCRFQMDNLPSKEAAAYKNRSARTFACPDCASTLQTIKTGDK---------YIFFCSHCRWDSANL--LADDDPDTLTMVANTRERDEDV---FDVLLTHYQQQSNAHTAA---------LPKPLAF---NSLARLGKPHFHVKAPTTLGWKMDQLEAKLQKRNEENVLTPFDQKAVAAVRAKFPQHRSFETDDAVAVAAVAGTSDMSLVSTLRQRYLSTPLVQSRDVA-GLYP-----SRPDLR---VKRSWRCVEAMAANNPGILVKPQINPMTGDSSMVVSAS-WWKKATLGIHFVPNVTVQR 312          
BLAST of EWM21790.1 vs. NCBI_GenBank
Match: gi|695388026|ref|XP_009519071.1| (dynactin light chain p62 subunit [Phytophthora sojae] >gi|348683968|gb|EGZ23783.1| dynactin light chain p62 subunit [Phytophthora sojae])

HSP 1 Score: 113.235 bits (282), Expect = 6.275e-23
Identity = 120/451 (26.61%), Postives = 185/451 (41.02%), Query Frame = 0
Query:   31 EGVSDVKVVFTDYQGWWAPLTHLFYSNASQCLVSAHPESSIEEVESFYCSHCLNYFADAEAASSYHRCPRCFDCPQCTSALLIISVDEESNHEENDAGYTFRCGYCRWSSADSIGLIESTPEALIERLKKTELDDPQAVRYRALLQH------LRQRAVAIARARRHHDRQYLLSAPFALPTENELDSLGVGPVRARARWHLSDLEEK-----EDRGQAARTRATDGKETAYLSTLLTEEKMGTKTAADACSFSAEDVDRAPASWVTLRTLSPRGPSSQTASRSLYPPLTSHSRPRRRPLCTKRVRRCRQDVEAGRPGILLKPKVNPLEGDSSWTGTAGKWWQKDSSAIHVLPSVSVIRAQGLEKVFAGRARATGVTGGGGQESDADARQWAKSHFAGTGDDPEALSFVLRLRNPLRGAVQVVLVPPPATSEGAGATTELYYLRRLPVALG 470
            + V  V V +    G  AP++ LF+S   + LV   P  S+EE ES+YC + L      EA+   +R  RCF CP C +AL        +   E+   + F C +CRW S + +GL +   +AL+      E        ++AL  H      L+  A ++   +R H  +       A     + D   +  V+ + +W L    E      + +  A +T+ T   E     T  T EK+            A+  D    S +  R L+P   SS  A R L+P     SRP  R    KR  RC + +E G  GIL+KP+++P+ GDSS   +A  W++K + A   +P V+  R          RA      GGGG E                         VL + NPL  A+++      A+ E +    ++      P+ +G
Sbjct:    7 DAVDGVCVRYACKCGHLAPVSSLFFSETCEKLVCRLPGCSVEEFESYYCGNLLVNLPSKEASMYQNRSSRCFSCPACETAL-------STAFHESKQRFFFLCAHCRWDSLE-LGLADDDLDALVMTAITRERQAAHEDVFQALHSHYSTLSSLQLLADSMKELQREHQMKKFRLQRMAEMGGWKYDQ-ALAKVQEKEQWLLEQRREHQWPELQKQLTALQTQGTSWGEDTPEKTRETLEKL------------AQTSDMGQVSTLHQRLLNPLDQSSD-ADR-LFP-----SRPLLR---VKRTWRCVESIERGTAGILVKPQISPMSGDSSLPVSAS-WFKKANLAAQYVPVVTFQR-------LPYRAE-----GGGGVEC------------------------VLLVENPLDDAIRITFRSASASGEESTENGQIVLQDSTPIIVG 389          
BLAST of EWM21790.1 vs. NCBI_GenBank
Match: gi|301114663|ref|XP_002999101.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262111195|gb|EEY69247.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 111.694 bits (278), Expect = 1.840e-22
Identity = 97/345 (28.12%), Postives = 155/345 (44.93%), Query Frame = 0
Query:   45 GWWAPLTHLFYSNASQCLVSAHPESSIEEVESFYCSHCLNYFADAEAASSYHRCPRCFDCPQCTSALLIISVDEESNHEENDAGYTFRCGYCRWSSADSIGLIESTPEALIERLKKTELDDPQAVRYRALLQHLRQRAVAIARARRHHDRQYLLSAPFALPTENELDSLGVGPVRARARWH----LSDLEEKEDRGQAARTRATDGKETAYLSTLLTEEKMGTKTAADACSFSAEDVDR-------APASWVTLRTLSPRGPSSQTASRSLYPPLTSHSRPRRRPLCTKRVRRCRQDVEAGRPGILLKPKVNPLEGDSSWTGTAGKWWQKDSSAIHVLPSVSVIR 378
            G  AP++ LF+S   + LV   P  S+EE ES+YC + L      EA+   +R  RCF CP C +AL        + HE+    Y F CG+CRW S + +GL++  P+ALI     T +   +   +  + Q L      ++        Q L  +   L  E+++    +  +     W     L+ ++EKE      R      + T  L+ L  +   GT    D    + E ++           S +  R L+P   S    +  L+P     SRP  R    KR  RC + ++ G  GIL+KP+++P+ GDSS   +A  W++K + A H +P ++  R
Sbjct:   19 GHLAPVSSLFFSETCEKLVCRLPRCSVEEFESYYCGNLLVNLPSKEASMYQNRSSRCFSCPTCETAL------STAIHEQR---YFFLCGHCRWDSLE-LGLVDDDPDALI----MTAITRERQAAHEDVFQTLHSHYATLSSL------QLLADSMKELQREHQMKKFRLQRMSEMGGWKYDQALAKVQEKEQWLLQQRREHQWPELTKQLAALQIQ---GTSWGQDTPEKTREMLENLSQKREMGEVSTLHQRLLNPLDQSRD--ADKLFP-----SRPLLR---VKRTWRCVESIKRGTAGILVKPQISPMSGDSSLPVSAS-WFKKANLAAHYVPVITFQR 329          
BLAST of EWM21790.1 vs. NCBI_GenBank
Match: gi|1214713502|gb|OWZ24392.1| (Dynactin light chain p62 subunit [Phytophthora megakarya])

HSP 1 Score: 110.153 bits (274), Expect = 8.233e-22
Identity = 114/460 (24.78%), Postives = 183/460 (39.78%), Query Frame = 0
Query:   35 DVKVVFTDYQGWWAPLTHLFYSNASQCLVSAHPESSIEEVESFYCSHCLNYFADAEAASSYHRCPRCFDCPQCTSALLIISVDEESNHEENDAGYTFRCGYCRWSSADSIGLIESTPEALIERLKKTELDDPQAVRYRALLQHLRQRA----------VAIARARRHHDRQYLLSAPFALPTENELDSLGVGPVRARARWH----LSDLEEKEDRGQAARTRATDGKETAYLSTLLTEEKMGTKTAADACSFSAEDVDR-------APASWVTLRTLSPRGPSSQTASRSLYPPLTSHSRPRRRPLCTKRVRRCRQDVEAGRPGILLKPKVNPLEGDSSWTGTAGKWWQKDSSAIHVLPSVSVIRAQGLEKVFAGRARATGVTGGGGQESDADARQWAKSHFAGTGDDPEALSFVLRLRNPLRGAVQVVLVPPPAT---SEGAGATTELYYLRRLPVALG 470
            D+ V++    G  A ++ LFYS     LV   P  S+EE ES+YC + L      EA+   +R  RCF CP C + L        +   E++  + F C +CRW S  ++GL +  P+ALI      E        ++ L  H    +           + A   R    Q L  +   L  E+++    +  +     W     L+ ++EKE      R      +    L+T+ T+   GT    DA   + E +++          S +  R L+P   +    +  L+P     SRP  R    KR  RC + +E G  GIL+KP+++P+ GDSS   +A  W++K + A   +P V+  R                                         DD   +  VL + NPL  A+++     PAT   SE A   +++      P+ +G
Sbjct:    6 DISVLYACQCGHLAAVSSLFYSETCDKLVCRLPGCSVEEFESYYCGNLLVNLPSKEASMYQNRSSRCFSCPTCDTTL-------STAFHESEQRFFFLCPHCRWDSL-ALGLADDDPDALIMTAITRERQAAHEDVFQVLHSHYATLSSSSTNGGTATTSAASFGRSSSLQLLADSMKELQREHQMKKFRLQRMAEMGGWKYDQALAKVQEKEQWLMEQRREHQWPELAKQLATMQTQ---GTSWGQDASEKTREVLEKLSQTREMGHVSTLHQRLLNPLDQARD--ADKLFP-----SRPLLR---VKRTWRCVESIERGSAGILVKPQISPMSGDSSLPVSAS-WFKKANLAAQYVPVVTFQR------------------------------------LPYRNDDTSGVECVLLVENPLDDAIRITFRSAPATLDSSENATENSQIVLHDSTPIIVG 407          
BLAST of EWM21790.1 vs. NCBI_GenBank
Match: gi|1173959329|gb|OQS05577.1| (DNA replication licensing factor MCM6 [Thraustotheca clavata])

HSP 1 Score: 111.309 bits (277), Expect = 1.457e-21
Identity = 91/332 (27.41%), Postives = 145/332 (43.67%), Query Frame = 0
Query:   45 GWWAPLTHLFYSNASQCLVSAHPESSIEEVESFYCSHCLNYFADAEAASSYHRCPRCFDCPQCTSALLIISVDEESNHEENDAGYTFRCGYCRWSSADSIGLIESTPEALIERLKKTELDDPQAVRYRALLQHLRQRAVAIARARRHHDRQYLLSAPFALPTENELDSLGVGPVRARARWHLSDLEEK-EDRGQAARTRATDGKETAYLSTLLTEEKMGTKTAADACSFSAEDVDRAPASWVTLRTLSPRGPSSQTASRSLYPPLTSHSRPRRRPLCTKRVRRCRQDVEAGRPGILLKPKVNPLEGDSSWTGTAGKWWQKDSSAIHVLPSVS 375
            G   PL+ LF+S +   +V   P  S++E++S++C   ++     EAA+  +R  R F CP C S L  I  +E+         Y F C +CRW S     L +  P+ L+      E D+     +  LL H +Q++   A    +H +     +      + + +      V +   W +  LEEK   R   +     D K    L     + +       D     A+  D    S +  R L      S+   + LYP     SRP  R    KR  RC + +   +PGIL+KP++NP+ GDSS   +A  WW+K + A+H +P+V+
Sbjct:   12 GRQYPLSELFWSESCNKIVCPWPTCSLQEIDSYFCRFQMDNLPSKEAAAYKNRSARTFACPDCQSTLQTIKTNEK---------YMFFCAHCRWDS--ETLLADDDPDTLMMVANTRERDEH---VFDTLLNHYQQKSTQNA---ANHPKPSAFGSTITRLGKPQFNV----KVPSTIGWKMEQLEEKLHKRSIDSILTPHDKKLADTLRAKFPQHREFDTNEMDDVIALAKQKDMTQISTLKQRYLCTPLLQSRDV-KELYP-----SRPDLR---VKRSWRCVEAMANNKPGILVKPQINPMTGDSSMVISAS-WWKKATLAVHFIPNVT 312          
The following BLAST results are available for this feature:
BLAST of EWM21790.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102126|gb|EWM21790.1|0.000e+0100.00Dynactin p62 [Nannochloropsis gaditana][more]
gi|698816774|ref|XP_009841416.1|4.978e-2729.67hypothetical protein H257_15118 [Aphanomyces astac... [more]
gi|673040697|ref|XP_008874309.1|6.342e-2630.03hypothetical protein H310_09887 [Aphanomyces invad... [more]
gi|1072227682|gb|OEU12421.1|1.354e-2432.34hypothetical protein FRACYDRAFT_244689 [Fragilario... [more]
gi|325181250|emb|CCA15664.1|2.153e-2427.51conserved hypothetical protein [Albugo laibachii N... [more]
gi|1173941052|gb|OQR90302.1|9.075e-2430.15hypothetical protein ACHHYP_05640 [Achlya hypogyna... [more]
gi|695388026|ref|XP_009519071.1|6.275e-2326.61dynactin light chain p62 subunit [Phytophthora soj... [more]
gi|301114663|ref|XP_002999101.1|1.840e-2228.12conserved hypothetical protein [Phytophthora infes... [more]
gi|1214713502|gb|OWZ24392.1|8.233e-2224.78Dynactin light chain p62 subunit [Phytophthora meg... [more]
gi|1173959329|gb|OQS05577.1|1.457e-2127.41DNA replication licensing factor MCM6 [Thraustothe... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8906rna8906Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications