EWM21802.1, cds8864 (CDS) Nannochloropsis gaditana

Overview
NameEWM21802.1
Unique Namecds8864
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:411996..412654 -

Link to JBrowse

Properties
Property NameValue
Start range411996
Start range.
Protein idEWM21802.1
Productlysophospholipase ii
Partialtrue
Orig transcript idgnl|cribi|Naga_100065g28.7393.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:411996..412654 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR003140PLipase/COase/thioEstase
IPR029058AB_hydrolase
Homology
BLAST of EWM21802.1 vs. NCBI_GenBank
Match: gi|585102138|gb|EWM21802.1| (lysophospholipase ii, partial [Nannochloropsis gaditana])

HSP 1 Score: 445.277 bits (1144), Expect = 3.707e-158
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0
Query:    1 MSLPLPWSARRAICLSVSSILATAKSTAFAYPTSTFSADTRTRGLAVMTHRASRNDNVGGAGITLNPVGGPAQSSIIWMHGLGDSGEGWAGAFDPKVFPTTRMIFPTAPTRPITLNGGFPMPGWFDINGLDESSPEDRAGFEEAKQRIARIVQGEVEAGVPADKIVLGGFSQGGAVTLHLALRSEVRLGGAVILSGWLPLKADYPAALTEVGKAMPYFHG 220
            MSLPLPWSARRAICLSVSSILATAKSTAFAYPTSTFSADTRTRGLAVMTHRASRNDNVGGAGITLNPVGGPAQSSIIWMHGLGDSGEGWAGAFDPKVFPTTRMIFPTAPTRPITLNGGFPMPGWFDINGLDESSPEDRAGFEEAKQRIARIVQGEVEAGVPADKIVLGGFSQGGAVTLHLALRSEVRLGGAVILSGWLPLKADYPAALTEVGKAMPYFHG
Sbjct:    1 MSLPLPWSARRAICLSVSSILATAKSTAFAYPTSTFSADTRTRGLAVMTHRASRNDNVGGAGITLNPVGGPAQSSIIWMHGLGDSGEGWAGAFDPKVFPTTRMIFPTAPTRPITLNGGFPMPGWFDINGLDESSPEDRAGFEEAKQRIARIVQGEVEAGVPADKIVLGGFSQGGAVTLHLALRSEVRLGGAVILSGWLPLKADYPAALTEVGKAMPYFHG 220          
BLAST of EWM21802.1 vs. NCBI_GenBank
Match: gi|553182013|ref|XP_005853662.1| (lysophospholipase II [Nannochloropsis gaditana CCMP526] >gi|422295404|gb|EKU22703.1| lysophospholipase II [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 351.288 bits (900), Expect = 7.470e-121
Identity = 171/173 (98.84%), Postives = 172/173 (99.42%), Query Frame = 0
Query:   48 MTHRASRNDNVGGAGITLNPVGGPAQSSIIWMHGLGDSGEGWAGAFDPKVFPTTRMIFPTAPTRPITLNGGFPMPGWFDINGLDESSPEDRAGFEEAKQRIARIVQGEVEAGVPADKIVLGGFSQGGAVTLHLALRSEVRLGGAVILSGWLPLKADYPAALTEVGKAMPYFHG 220
            MTHRASRNDNVGGAGITLNPVGGPAQSSIIWMHGLGDSGEGWAGAFDPKVFPTTRMIFPTAPTRPITLNGGFPMPGWFDINGLDESSPEDRAGFEEAKQRIARIVQGEVEAGVPADKIVLGGFSQGGAVTLHLALRSEVRLGGAVILSGWLPLKADYPAALT+VGK MPYFHG
Sbjct:    1 MTHRASRNDNVGGAGITLNPVGGPAQSSIIWMHGLGDSGEGWAGAFDPKVFPTTRMIFPTAPTRPITLNGGFPMPGWFDINGLDESSPEDRAGFEEAKQRIARIVQGEVEAGVPADKIVLGGFSQGGAVTLHLALRSEVRLGGAVILSGWLPLKADYPAALTDVGKTMPYFHG 173          
BLAST of EWM21802.1 vs. NCBI_GenBank
Match: gi|298709213|emb|CBJ31154.1| (similar to lysophospholipase II [Ectocarpus siliculosus])

HSP 1 Score: 170.244 bits (430), Expect = 2.486e-49
Identity = 83/167 (49.70%), Postives = 103/167 (61.68%), Query Frame = 0
Query:   56 DNVGGAGITLNPVGGPAQSSIIWMHGLGDSGEGWAGAFDPKVFPTTRMIFPTAPTRPITLNGGFPMPGWFDINGLDESSPEDRAGFEEAKQRIARIVQGEVEAGVPADKIVLGGFSQGGAVTLHLALRSEVRLGGAVILSGWLPLKADYPAALTEVGKAMP--YFHG 220
            D +GG+GITL P  G   + ++W+HGLGD+  GWA        P T+ I PTA TRPITLNGG+ MPGW DI GL E SPED  GF  +  R+  I++ E   G  + ++V+GGFSQGGAV LH  LR+   L G V  S W+PL  DYP AL    K +P   FHG
Sbjct:   16 DTLGGSGITLVPKDGAYTNVVVWLHGLGDTAAGWASTMPQLKLPHTKFILPTADTRPITLNGGYEMPGWSDIFGLQEDSPEDAVGFNASADRVRAILEAEKAKGKESTRMVVGGFSQGGAVALHFCLRATEPLAGCVACSTWIPLNKDYPTALGSASKDIPVAQFHG 182          
BLAST of EWM21802.1 vs. NCBI_GenBank
Match: gi|1133422135|ref|XP_019866716.1| (PREDICTED: acyl-protein thioesterase 1 isoform X3 [Aethina tumida])

HSP 1 Score: 151.369 bits (381), Expect = 2.646e-42
Identity = 65/135 (48.15%), Postives = 95/135 (70.37%), Query Frame = 0
Query:   74 SSIIWMHGLGDSGEGWAGAFDPKVFPTTRMIFPTAPTRPITLNGGFPMPGWFDINGLDESSPEDRAGFEEAKQRIARIVQGEVEAGVPADKIVLGGFSQGGAVTLHLALRSEVRLGGAVILSGWLPLKADYPAAL 208
            +++I++HGLGD+G+GWA A      P  ++I PTAPT P+TLN GF MP WFD+  LDES PED  G + A +++  +++ E++AG+ AD+I++GGFSQGGA+ L+ AL    +L G V LS WLPL+  +P  +
Sbjct:   15 ATLIFLHGLGDTGQGWASAMGALRLPHVKVICPTAPTMPVTLNAGFRMPSWFDLKSLDESGPEDEEGIKNATKQVHNMIEDEIKAGIQADRIIIGGFSQGGALALYSALTFPQKLAGVVALSCWLPLRKSFPGVM 149          
BLAST of EWM21802.1 vs. NCBI_GenBank
Match: gi|1080063661|ref|XP_018573925.1| (PREDICTED: acyl-protein thioesterase 1 [Anoplophora glabripennis])

HSP 1 Score: 151.369 bits (381), Expect = 3.046e-42
Identity = 68/134 (50.75%), Postives = 95/134 (70.90%), Query Frame = 0
Query:   74 SSIIWMHGLGDSGEGWAGAFDPKVFPTTRMIFPTAPTRPITLNGGFPMPGWFDINGLDESSPEDRAGFEEAKQRIARIVQGEVEAGVPADKIVLGGFSQGGAVTLHLALRSEVRLGGAVILSGWLPLKADYPAA 207
            S++I++HGLGD+G+GWA A      P  ++I PTAPT P+TLN GF MP WFD+  LDES PED  G + A ++I  +++ E+ +G+PA++I+LGGFSQGGA+ L+ AL    R+ G V LS WLPL   +PA+
Sbjct:   15 STLIFLHGLGDTGQGWASAMGALRQPYVKVICPTAPTMPVTLNAGFRMPSWFDLKTLDESGPEDDQGIKTATKQIHALIENEISSGIPANRILLGGFSQGGALALYSALTYPQRVAGVVALSAWLPLNKTFPAS 148          
BLAST of EWM21802.1 vs. NCBI_GenBank
Match: gi|1133422133|ref|XP_019866715.1| (PREDICTED: acyl-protein thioesterase 1 isoform X2 [Aethina tumida])

HSP 1 Score: 151.369 bits (381), Expect = 3.360e-42
Identity = 65/135 (48.15%), Postives = 95/135 (70.37%), Query Frame = 0
Query:   74 SSIIWMHGLGDSGEGWAGAFDPKVFPTTRMIFPTAPTRPITLNGGFPMPGWFDINGLDESSPEDRAGFEEAKQRIARIVQGEVEAGVPADKIVLGGFSQGGAVTLHLALRSEVRLGGAVILSGWLPLKADYPAAL 208
            +++I++HGLGD+G+GWA A      P  ++I PTAPT P+TLN GF MP WFD+  LDES PED  G + A +++  +++ E++AG+ AD+I++GGFSQGGA+ L+ AL    +L G V LS WLPL+  +P  +
Sbjct:   23 ATLIFLHGLGDTGQGWASAMGALRLPHVKVICPTAPTMPVTLNAGFRMPSWFDLKSLDESGPEDEEGIKNATKQVHNMIEDEIKAGIQADRIIIGGFSQGGALALYSALTFPQKLAGVVALSCWLPLRKSFPGVM 157          
BLAST of EWM21802.1 vs. NCBI_GenBank
Match: gi|1133422131|ref|XP_019866714.1| (PREDICTED: acyl-protein thioesterase 1 isoform X1 [Aethina tumida])

HSP 1 Score: 152.14 bits (383), Expect = 4.768e-42
Identity = 65/135 (48.15%), Postives = 95/135 (70.37%), Query Frame = 0
Query:   74 SSIIWMHGLGDSGEGWAGAFDPKVFPTTRMIFPTAPTRPITLNGGFPMPGWFDINGLDESSPEDRAGFEEAKQRIARIVQGEVEAGVPADKIVLGGFSQGGAVTLHLALRSEVRLGGAVILSGWLPLKADYPAAL 208
            +++I++HGLGD+G+GWA A      P  ++I PTAPT P+TLN GF MP WFD+  LDES PED  G + A +++  +++ E++AG+ AD+I++GGFSQGGA+ L+ AL    +L G V LS WLPL+  +P  +
Sbjct:   52 ATLIFLHGLGDTGQGWASAMGALRLPHVKVICPTAPTMPVTLNAGFRMPSWFDLKSLDESGPEDEEGIKNATKQVHNMIEDEIKAGIQADRIIIGGFSQGGALALYSALTFPQKLAGVVALSCWLPLRKSFPGVM 186          
BLAST of EWM21802.1 vs. NCBI_GenBank
Match: gi|906469950|gb|KNC30574.1| (hypothetical protein FF38_11962 [Lucilia cuprina])

HSP 1 Score: 149.058 bits (375), Expect = 2.237e-41
Identity = 72/148 (48.65%), Postives = 95/148 (64.19%), Query Frame = 0
Query:   74 SSIIWMHGLGDSGEGWAGAFDPKVFPTTRMIFPTAPTRPITLNGGFPMPGWFDINGLDESSPEDRAGFEEAKQRIARIVQGEVEAGVPADKIVLGGFSQGGAVTLHLALRSEVRLGGAVILSGWLPLKADYPAALTEVGKAMPY-FHG 220
            S++I+MHGLGD+G GW+ A      P+ +++ PTAPT+P+TLN GF MP WFD+  LD S PED  G + A Q I  ++  E+E G+P+++IVLGGFSQGGA+ L+ AL     L G V LS WLPL   +P   T  G    Y  HG
Sbjct:   16 STLIFMHGLGDTGHGWSSALAAIRPPSMKVVCPTAPTQPVTLNAGFRMPSWFDLKTLDISGPEDEEGIKSASQNIQTMINTEIEKGIPSNRIVLGGFSQGGALALYSALTYNKPLAGVVALSCWLPLHKQFPGIKTNSGDIPIYQCHG 163          
BLAST of EWM21802.1 vs. NCBI_GenBank
Match: gi|145348725|ref|XP_001418794.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144579024|gb|ABO97087.1| predicted protein [Ostreococcus lucimarinus CCE9901])

HSP 1 Score: 148.673 bits (374), Expect = 3.905e-41
Identity = 74/161 (45.96%), Postives = 105/161 (65.22%), Query Frame = 0
Query:   63 ITLNPVGGPAQSSIIWMHGLGDSGEGWAGAFDPKVFPT---TRMIFPTAPTRPITLNGGFPMPGWFDINGLDESS-PEDRAGFEEAKQRIARIVQGEVEAGVPADKIVLGGFSQGGAVTLHLALRSEVRLGGAVILSGWLPLKADYPAALTEVGKAMPYFH 219
            I + P GG A +++I +HGLGD+G GWAGA      P     R +FPTA T P+TLNGG  M  WFD+N LDE S  +DR   + + + +  +V+ +++ G+P++KI++GGFSQGGA+ L  ALRSEV+L G V +S +LPL+ADYP       K++  F 
Sbjct:    8 IVVEPRGGDANAAMILLHGLGDTGRGWAGAAGQIPTPAGAHVRWVFPTAKTMPVTLNGGMRMTAWFDLNALDERSIVDDRGEIDASVEYLNALVREQMDKGIPSEKIMIGGFSQGGAIALTAALRSEVKLAGCVAMSTYLPLRADYPDRFGAHAKSLKIFQ 168          
BLAST of EWM21802.1 vs. NCBI_GenBank
Match: gi|742164022|ref|XP_010883854.1| (PREDICTED: acyl-protein thioesterase 1 [Esox lucius])

HSP 1 Score: 147.517 bits (371), Expect = 1.251e-40
Identity = 68/141 (48.23%), Postives = 95/141 (67.38%), Query Frame = 0
Query:   67 PVGGPAQSSIIWMHGLGDSGEGWAGAFDPKVFPTTRMIFPTAPTRPITLNGGFPMPGWFDINGLDESSPEDRAGFEEAKQRIARIVQGEVEAGVPADKIVLGGFSQGGAVTLHLALRSEVRLGGAVILSGWLPLKADYPAA 207
            P    A +++I++HGLGD+G GWA AF     P  + I P AP +P+TLN G  MP WFDI GL   + ED AG ++A + I  ++  EV+ G+P+ +IVLGGFSQGGA++L+ AL ++ +LGG V LS WLPL+  +P A
Sbjct:   15 PAARKATAAVIFLHGLGDTGHGWAEAFAGIRTPHVKYICPHAPIKPVTLNMGMSMPSWFDIIGLQTDAEEDEAGIKQASENIKALIDQEVKNGIPSHRIVLGGFSQGGALSLYTALTTQQKLGGVVALSCWLPLRNSFPQA 155          
The following BLAST results are available for this feature:
BLAST of EWM21802.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102138|gb|EWM21802.1|3.707e-158100.00lysophospholipase ii, partial [Nannochloropsis gad... [more]
gi|553182013|ref|XP_005853662.1|7.470e-12198.84lysophospholipase II [Nannochloropsis gaditana CCM... [more]
gi|298709213|emb|CBJ31154.1|2.486e-4949.70similar to lysophospholipase II [Ectocarpus silicu... [more]
gi|1133422135|ref|XP_019866716.1|2.646e-4248.15PREDICTED: acyl-protein thioesterase 1 isoform X3 ... [more]
gi|1080063661|ref|XP_018573925.1|3.046e-4250.75PREDICTED: acyl-protein thioesterase 1 [Anoplophor... [more]
gi|1133422133|ref|XP_019866715.1|3.360e-4248.15PREDICTED: acyl-protein thioesterase 1 isoform X2 ... [more]
gi|1133422131|ref|XP_019866714.1|4.768e-4248.15PREDICTED: acyl-protein thioesterase 1 isoform X1 ... [more]
gi|906469950|gb|KNC30574.1|2.237e-4148.65hypothetical protein FF38_11962 [Lucilia cuprina][more]
gi|145348725|ref|XP_001418794.1|3.905e-4145.96predicted protein [Ostreococcus lucimarinus CCE990... [more]
gi|742164022|ref|XP_010883854.1|1.251e-4048.23PREDICTED: acyl-protein thioesterase 1 [Esox luciu... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8894rna8894Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications