EWM21815.1, cds8858 (CDS) Nannochloropsis gaditana

Overview
NameEWM21815.1
Unique Namecds8858
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:397017..398510 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21815.1
Productrps6ka4 protein
Orig transcript idgnl|cribi|Naga_101649g1.1361.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:397017..398510 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0004674protein serine/threonine kinase activity
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006468protein phosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR000961AGC-kinase_C
IPR000719Prot_kinase_dom
IPR002290Ser/Thr_dual-sp_kinase
Homology
BLAST of EWM21815.1 vs. NCBI_GenBank
Match: gi|585102154|gb|EWM21815.1| (rps6ka4 protein [Nannochloropsis gaditana])

HSP 1 Score: 940.643 bits (2430), Expect = 0.000e+0
Identity = 497/497 (100.00%), Postives = 497/497 (100.00%), Query Frame = 0
Query:    1 MAARGGSGRRRGRGGGQGGKEGGREGGGKGGREGRSAGLERDGADRARGLRQGVPGPSEQPIRRLAGAGGGGGGREGAPRAAVCPEGAGQGGSDAAEPDRADVERARALGHPPASLPRPPPLRVQHLPTPLPGPGVLPGRGPVHVDEEGGPDGGGRGAGVCSGDGAGPGLLARPRGALPGPEARERADGAGRAPEARRPGLGPPLRQRPSFAGGGEGKGGGGRRGRGGGREGGREGRRERGREDLFVSHHGLIRCPAPATLYRSHSFCGTHEYLAPEVLLNQGHSLPVDWWCLGLCLHEMLTRRHPFKPLPPPSLPPSPAPSPSSPASSPPACPGEVMRNICGFPPFLHPSLSSDAAALLVRLLEKDPDRRLGGVAALRQQPFFKNLNWEAVYEKRVEAPYRPRVRSDEDVGCFAGCLTEERVRYSDVVASEDGWVRGKGEEGREGEREGGGCLLPVWPRGRGRGECQGWSWRGRKTRREEEEEGMWEGFEYVAEEG 497
            MAARGGSGRRRGRGGGQGGKEGGREGGGKGGREGRSAGLERDGADRARGLRQGVPGPSEQPIRRLAGAGGGGGGREGAPRAAVCPEGAGQGGSDAAEPDRADVERARALGHPPASLPRPPPLRVQHLPTPLPGPGVLPGRGPVHVDEEGGPDGGGRGAGVCSGDGAGPGLLARPRGALPGPEARERADGAGRAPEARRPGLGPPLRQRPSFAGGGEGKGGGGRRGRGGGREGGREGRRERGREDLFVSHHGLIRCPAPATLYRSHSFCGTHEYLAPEVLLNQGHSLPVDWWCLGLCLHEMLTRRHPFKPLPPPSLPPSPAPSPSSPASSPPACPGEVMRNICGFPPFLHPSLSSDAAALLVRLLEKDPDRRLGGVAALRQQPFFKNLNWEAVYEKRVEAPYRPRVRSDEDVGCFAGCLTEERVRYSDVVASEDGWVRGKGEEGREGEREGGGCLLPVWPRGRGRGECQGWSWRGRKTRREEEEEGMWEGFEYVAEEG
Sbjct:    1 MAARGGSGRRRGRGGGQGGKEGGREGGGKGGREGRSAGLERDGADRARGLRQGVPGPSEQPIRRLAGAGGGGGGREGAPRAAVCPEGAGQGGSDAAEPDRADVERARALGHPPASLPRPPPLRVQHLPTPLPGPGVLPGRGPVHVDEEGGPDGGGRGAGVCSGDGAGPGLLARPRGALPGPEARERADGAGRAPEARRPGLGPPLRQRPSFAGGGEGKGGGGRRGRGGGREGGREGRRERGREDLFVSHHGLIRCPAPATLYRSHSFCGTHEYLAPEVLLNQGHSLPVDWWCLGLCLHEMLTRRHPFKPLPPPSLPPSPAPSPSSPASSPPACPGEVMRNICGFPPFLHPSLSSDAAALLVRLLEKDPDRRLGGVAALRQQPFFKNLNWEAVYEKRVEAPYRPRVRSDEDVGCFAGCLTEERVRYSDVVASEDGWVRGKGEEGREGEREGGGCLLPVWPRGRGRGECQGWSWRGRKTRREEEEEGMWEGFEYVAEEG 497          
BLAST of EWM21815.1 vs. NCBI_GenBank
Match: gi|354546344|emb|CCE43074.1| (hypothetical protein CPAR2_207170 [Candida parapsilosis])

HSP 1 Score: 125.946 bits (315), Expect = 4.596e-27
Identity = 61/160 (38.12%), Postives = 88/160 (55.00%), Query Frame = 0
Query:  263 RSHSFCGTHEYLAPEVLLNQGHSLPVDWWCLGLCLHEMLTRRHPFKPLPPPSLPPSPAPSPSSPASSPPACPGEVMRNICGFPPFLHPSLSSDAAALLVRLLEKDPDRRLGGVAALRQQPFFKNLNWEAVYEKRVEAPYRPRVRSDEDVGCFAGCLTEER 422
            ++++FCGT EYLAPE+LLNQG++  VDWW LG  L+EMLT   PF                    S  P    ++++N   FPPFL    ++DA  LL++LL+KDP  RL    A++  PFFK+++W  +  K    P++P V +  D   F    T E+
Sbjct:  584 KTNTFCGTPEYLAPELLLNQGYTRSVDWWTLGTLLYEMLTGLPPFYD------------------SDVPTMYKKILQNPLRFPPFLE---NTDAQDLLIKLLQKDPQYRLNDAQAIKNHPFFKDIDWNKLLNKSYLPPFKPNVENLLDTSNFDQDFTNEK 722          
BLAST of EWM21815.1 vs. NCBI_GenBank
Match: gi|448511169|ref|XP_003866478.1| (serine/threonine protein kinase [Candida orthopsilosis Co 90-125] >gi|380350816|emb|CCG21038.1| serine/threonine protein kinase [Candida orthopsilosis Co 90-125])

HSP 1 Score: 125.561 bits (314), Expect = 6.257e-27
Identity = 61/160 (38.12%), Postives = 88/160 (55.00%), Query Frame = 0
Query:  263 RSHSFCGTHEYLAPEVLLNQGHSLPVDWWCLGLCLHEMLTRRHPFKPLPPPSLPPSPAPSPSSPASSPPACPGEVMRNICGFPPFLHPSLSSDAAALLVRLLEKDPDRRLGGVAALRQQPFFKNLNWEAVYEKRVEAPYRPRVRSDEDVGCFAGCLTEER 422
            ++++FCGT EYLAPE+LLNQG++  VDWW LG  L+EMLT   PF                    S  P    ++++N   FPPFL    ++DA  LL++LL+KDP  RL    A++  PFFK+++W  +  K    P++P V +  D   F    T E+
Sbjct:  577 KTNTFCGTPEYLAPELLLNQGYTRSVDWWTLGTLLYEMLTGLPPFYD------------------SDVPTMYRKILQNPLRFPPFLE---NTDAQDLLIKLLQKDPSHRLNDAQAIKNHPFFKDIDWNKLLNKSYLPPFKPNVENLLDTSNFDQDFTNEK 715          
BLAST of EWM21815.1 vs. NCBI_GenBank
Match: gi|359465193|emb|CCE88898.1| (Piso0_001688 [Millerozyma farinosa CBS 7064])

HSP 1 Score: 125.176 bits (313), Expect = 8.473e-27
Identity = 61/160 (38.12%), Postives = 85/160 (53.12%), Query Frame = 0
Query:  263 RSHSFCGTHEYLAPEVLLNQGHSLPVDWWCLGLCLHEMLTRRHPFKPLPPPSLPPSPAPSPSSPASSPPACPGEVMRNICGFPPFLHPSLSSDAAALLVRLLEKDPDRRLGGVAALRQQPFFKNLNWEAVYEKRVEAPYRPRVRSDEDVGCFAGCLTEER 422
            ++++FCGT EYLAPE+LLNQG++  VDWW LG  L+EMLT   PF                       P    ++++N   FPPFL     +DA  LL +LL+KDP  RL   A ++  PFFK+++W  +  K    P++P V S  D   F    T E+
Sbjct:  545 KTNTFCGTPEYLAPELLLNQGYTRNVDWWTLGTLLYEMLTGLPPFYD------------------DDVPTMYRKILQNPLKFPPFLDK---TDAQDLLTKLLQKDPSHRLSDAATIKSHPFFKDIDWNKLLSKNYLPPFKPNVDSLLDTSNFDSDFTNEK 683          
BLAST of EWM21815.1 vs. NCBI_GenBank
Match: gi|359383695|emb|CCE79611.1| (Piso0_001688 [Millerozyma farinosa CBS 7064])

HSP 1 Score: 125.176 bits (313), Expect = 8.630e-27
Identity = 61/160 (38.12%), Postives = 85/160 (53.12%), Query Frame = 0
Query:  263 RSHSFCGTHEYLAPEVLLNQGHSLPVDWWCLGLCLHEMLTRRHPFKPLPPPSLPPSPAPSPSSPASSPPACPGEVMRNICGFPPFLHPSLSSDAAALLVRLLEKDPDRRLGGVAALRQQPFFKNLNWEAVYEKRVEAPYRPRVRSDEDVGCFAGCLTEER 422
            ++++FCGT EYLAPE+LLNQG++  VDWW LG  L+EMLT   PF                       P    ++++N   FPPFL     +DA  LL +LL+KDP  RL   A ++  PFFK+++W  +  K    P++P V S  D   F    T E+
Sbjct:  545 KTNTFCGTPEYLAPELLLNQGYTRNVDWWTLGTLLYEMLTGLPPFYD------------------DDVPTMYRKILQNPLKFPPFLDK---TDAQNLLTKLLQKDPSHRLSDAATIKSHPFFKDIDWNKLLSKNYLPPFKPNVDSLLDTSNFDSDFTNEK 683          
BLAST of EWM21815.1 vs. NCBI_GenBank
Match: gi|260944708|ref|XP_002616652.1| (hypothetical protein CLUG_03893 [Clavispora lusitaniae ATCC 42720] >gi|238850301|gb|EEQ39765.1| hypothetical protein CLUG_03893 [Clavispora lusitaniae ATCC 42720] >gi|1202151553|gb|OVF10814.1| putative serine/threonine protein kinase [Clavispora lusitaniae])

HSP 1 Score: 119.398 bits (298), Expect = 4.920e-25
Identity = 60/160 (37.50%), Postives = 88/160 (55.00%), Query Frame = 0
Query:  263 RSHSFCGTHEYLAPEVLLNQGHSLPVDWWCLGLCLHEMLTRRHPFKPLPPPSLPPSPAPSPSSPASSPPACPGEVMRNICGFPPFLHPSLSSDAAALLVRLLEKDPDRRLGGVAALRQQPFFKNLNWEAVYEKRVEAPYRPRVRSDEDVGCFAGCLTEER 422
            ++++FCGT EYLAPE+LLNQG++  VDWW LG  L+EMLT   PF                    S  P    ++++N   FPPFL     +DA  LL++LL+KDP +RL     ++   FFK+++W+ + +K  + P++P V    D   F    T ER
Sbjct:  464 KTNTFCGTPEYLAPELLLNQGYTRSVDWWTLGTLLYEMLTGLPPFFD------------------SDVPTMYKKILQNPLKFPPFLE---GTDAQDLLIKLLQKDPAKRLDDAQQIKNHAFFKDIDWKKLLDKGYQPPFKPTVNGFLDTSNFDQDFTNER 602          
BLAST of EWM21815.1 vs. NCBI_GenBank
Match: gi|1049288764|ref|XP_017541023.1| (PREDICTED: ribosomal protein S6 kinase beta-2-like [Pygocentrus nattereri])

HSP 1 Score: 116.701 bits (291), Expect = 1.503e-24
Identity = 71/220 (32.27%), Postives = 110/220 (50.00%), Query Frame = 0
Query:  238 RERGREDLFVSHHGLIRCPAPATLYRS-------HSFCGTHEYLAPEVLLNQGHSLPVDWWCLGLCLHEMLTRRHPFKPLPPPSLPPSPAPSPSSPASSPPACPGEVMRNICGFPPFLHPSLSSDAAALLVRLLEKDPDRRLGG----VAALRQQPFFKNLNWEAVYEKRVEAPYRPRVRSDEDVGCFAGCLTEERVRYSDVVASEDGWVRGKGEEGREG 446
            R+   E++ ++H G I+         S       H+FCGT EY+APE+L   GH+  VDWW LG  +++M+T   PF                   A +      ++++     PP+L P    DA  L+ +LL+K+P +RLG      A +++ PFF+++NWE +  KRVE PYRP ++SDEDV  F    T    R + V + +D  + G  +    G
Sbjct:  182 RDLKPENIMLNHEGHIKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILTRSGHNRAVDWWSLGALMYDMMTGSPPFT------------------AENRKRTIDKILKCKLSLPPYLTP----DARDLVKKLLKKNPTQRLGSGKGDCADIQKHPFFRHINWEDLLNKRVEPPYRPSLQSDEDVSQFDSRFT----RQTPVDSPDDTTLSGSADHAFAG 375          
BLAST of EWM21815.1 vs. NCBI_GenBank
Match: gi|1042347489|ref|XP_017316358.1| (PREDICTED: ribosomal protein S6 kinase beta-2-like [Ictalurus punctatus])

HSP 1 Score: 115.931 bits (289), Expect = 2.731e-24
Identity = 65/195 (33.33%), Postives = 102/195 (52.31%), Query Frame = 0
Query:  238 RERGREDLFVSHHGLIRCPAPATLYRS-------HSFCGTHEYLAPEVLLNQGHSLPVDWWCLGLCLHEMLTRRHPFKPLPPPSLPPSPAPSPSSPASSPPACPGEVMRNICGFPPFLHPSLSSDAAALLVRLLEKDPDRRLGG----VAALRQQPFFKNLNWEAVYEKRVEAPYRPRVRSDEDVGCFAGCLTEE 421
            R+   E++ ++H G I+         S       H+FCGT EY+APE+L   GH+  VDWW LG  +++M+T   PF                   A +      ++++     PP+L P    DA  L+ +LL+K+P +RLG      A +++QPFF+++NW+ +  KRVE PY+P + SDEDV  F    T++
Sbjct:  182 RDLKPENIMLNHEGHIKLTDFGLCKESIHDGSVTHTFCGTIEYMAPEILNRSGHNKAVDWWSLGALMYDMMTGSPPFS------------------AENRKKTIDKILKCKLNLPPYLTP----DARELIKKLLKKNPAQRLGSSKADCADIQKQPFFRHVNWDDLLSKRVEPPYKPSLHSDEDVSQFDSRFTKQ 354          
BLAST of EWM21815.1 vs. NCBI_GenBank
Match: gi|657760963|ref|XP_008315536.1| (PREDICTED: ribosomal protein S6 kinase beta-2-like [Cynoglossus semilaevis])

HSP 1 Score: 115.161 bits (287), Expect = 5.583e-24
Identity = 59/162 (36.42%), Postives = 91/162 (56.17%), Query Frame = 0
Query:  264 SHSFCGTHEYLAPEVLLNQGHSLPVDWWCLGLCLHEMLTRRHPFKPLPPPSLPPSPAPSPSSPASSPPACPGEVMRNICGFPPFLHPSLSSDAAALLVRLLEKDPDRRLGG----VAALRQQPFFKNLNWEAVYEKRVEAPYRPRVRSDEDVGCFAGCLTEE 421
            +H+FCGT EY+APE+L   GH+  VDWW LG  +++M+T   PF                   A +      ++++     PP+    L+ DA  L+ +LL+K+P +RLG      A +++ PFFK++NW+ +  KRVE PYRP+++SDEDV  F    T +
Sbjct:  215 THTFCGTIEYMAPEILTRLGHNRAVDWWSLGTLMYDMMTGSPPFT------------------AENRKKTIDKILKCKLNLPPY----LTIDARDLIKKLLKKNPAQRLGSSKADCADIQKHPFFKHINWDDLLNKRVEPPYRPQLQSDEDVSQFDTRFTRQ 354          
BLAST of EWM21815.1 vs. NCBI_GenBank
Match: gi|1079773189|ref|XP_018556479.1| (PREDICTED: ribosomal protein S6 kinase beta-2-like [Lates calcarifer])

HSP 1 Score: 114.39 bits (285), Expect = 8.075e-24
Identity = 63/195 (32.31%), Postives = 105/195 (53.85%), Query Frame = 0
Query:  238 RERGREDLFVSHHGLIRCP----APATLYR---SHSFCGTHEYLAPEVLLNQGHSLPVDWWCLGLCLHEMLTRRHPFKPLPPPSLPPSPAPSPSSPASSPPACPGEVMRNICGFPPFLHPSLSSDAAALLVRLLEKDPDRRLGG----VAALRQQPFFKNLNWEAVYEKRVEAPYRPRVRSDEDVGCFAGCLTEE 421
            R+   E++ ++H G I+         +++    +H+FCGT EY+APE+L   GH+  VDWW LG  +++M+T   PF                   A +      ++++     PP+    L+ DA  L+ +LL+K+P +RLG      A +++ PFFK++NW+ +  KRVE PY+P+++SDEDV  F    T +
Sbjct:  182 RDLKPENIMLNHQGHIKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILTRSGHNRAVDWWSLGALMYDMMTGSPPFT------------------AENRKKTIDKILKCKLNLPPY----LTIDARDLIKKLLKKNPAQRLGSSKADYADIQKHPFFKHVNWDDLLNKRVEPPYKPQLQSDEDVSQFDTRFTRQ 354          
The following BLAST results are available for this feature:
BLAST of EWM21815.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102154|gb|EWM21815.1|0.000e+0100.00rps6ka4 protein [Nannochloropsis gaditana][more]
gi|354546344|emb|CCE43074.1|4.596e-2738.13hypothetical protein CPAR2_207170 [Candida parapsi... [more]
gi|448511169|ref|XP_003866478.1|6.257e-2738.13serine/threonine protein kinase [Candida orthopsil... [more]
gi|359465193|emb|CCE88898.1|8.473e-2738.13Piso0_001688 [Millerozyma farinosa CBS 7064][more]
gi|359383695|emb|CCE79611.1|8.630e-2738.13Piso0_001688 [Millerozyma farinosa CBS 7064][more]
gi|260944708|ref|XP_002616652.1|4.920e-2537.50hypothetical protein CLUG_03893 [Clavispora lusita... [more]
gi|1049288764|ref|XP_017541023.1|1.503e-2432.27PREDICTED: ribosomal protein S6 kinase beta-2-like... [more]
gi|1042347489|ref|XP_017316358.1|2.731e-2433.33PREDICTED: ribosomal protein S6 kinase beta-2-like... [more]
gi|657760963|ref|XP_008315536.1|5.583e-2436.42PREDICTED: ribosomal protein S6 kinase beta-2-like... [more]
gi|1079773189|ref|XP_018556479.1|8.075e-2432.31PREDICTED: ribosomal protein S6 kinase beta-2-like... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8888rna8888Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications