EWM21820.1, cds8856 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21820.1 vs. NCBI_GenBank
Match: gi|585102161|gb|EWM21820.1| (iron-sulfur cluster assembly accessory protein [Nannochloropsis gaditana]) HSP 1 Score: 393.66 bits (1010), Expect = 1.279e-138 Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0 Query: 1 MHRPFLLQGTVAPISLLLGLLVICTITHGFFVPYLPSSSLSSSASAMSVVSGLSVGKAVPRLGSSQLWAEVAEKSEGVSDVTERVITVSDSALKHLEDLRAKQGVEHLYLRMGVRSGGCSGMSYVLDVMKPEEVTEEDHVESYSEHHFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 195 MHRPFLLQGTVAPISLLLGLLVICTITHGFFVPYLPSSSLSSSASAMSVVSGLSVGKAVPRLGSSQLWAEVAEKSEGVSDVTERVITVSDSALKHLEDLRAKQGVEHLYLRMGVRSGGCSGMSYVLDVMKPEEVTEEDHVESYSEHHFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV Sbjct: 1 MHRPFLLQGTVAPISLLLGLLVICTITHGFFVPYLPSSSLSSSASAMSVVSGLSVGKAVPRLGSSQLWAEVAEKSEGVSDVTERVITVSDSALKHLEDLRAKQGVEHLYLRMGVRSGGCSGMSYVLDVMKPEEVTEEDHVESYSEHHFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 195
BLAST of EWM21820.1 vs. NCBI_GenBank
Match: gi|553181331|ref|XP_005853547.1| (iron-sulfur cluster assembly accessory protein [Nannochloropsis gaditana CCMP526] >gi|422295517|gb|EKU22816.1| iron-sulfur cluster assembly accessory protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 340.502 bits (872), Expect = 1.496e-117 Identity = 186/195 (95.38%), Postives = 186/195 (95.38%), Query Frame = 0 Query: 1 MHRPFLLQGTVAPISLLLGLLVICTITHGFFVPYLPSSSLSSSASAMSVVSGLSVGKAVPRLGSSQLWAEVAEKSEGVSDVTERVITVSDSALKHLEDLRAKQGVEHLYLRMGVRSGGCSGMSYVLDVMKPEEVTEEDHVESYSEHHFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 195 MHRPFLLQGTVAPISLLLGLLVICTITHGFFVPYLPSSSLSSSASAMSVVSGLSVGKAVPRLGSSQLWAEVAEKSEGVSDVTERVITVSDSALKHLEDLRAKQGVEHLYLRMGVRS G G VMKPEEVTEEDHVESYSEHHFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV Sbjct: 1 MHRPFLLQGTVAPISLLLGLLVICTITHGFFVPYLPSSSLSSSASAMSVVSGLSVGKAVPRLGSSQLWAEVAEKSEGVSDVTERVITVSDSALKHLEDLRAKQGVEHLYLRMGVRSRGLLGHELRPGVMKPEEVTEEDHVESYSEHHFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 195
BLAST of EWM21820.1 vs. NCBI_GenBank
Match: gi|298705983|emb|CBJ29104.1| (iron-sulfur assembly protein [Ectocarpus siliculosus]) HSP 1 Score: 165.622 bits (418), Expect = 7.989e-49 Identity = 88/181 (48.62%), Postives = 118/181 (65.19%), Query Frame = 0 Query: 17 LLGLLVICTITHGFFVPYLPSSSLSSSASAMSVVSGLSVGKAVPRLGSSQLWAEVAEKSEGVSD-VTERVITVSDSALKHLEDLRAKQGVE-HLYLRMGVRSGGCSGMSYVLDVMKPEEVTEEDHVESYSEHHFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 195 ++ ++ ++ GF V P SS S S S VSG + + S A ++ S GV D V E+++ + A+ HL++LR QG E ++LRMGVRSGGCSG+SY++D++K EE+TE+D VE Y F CV+DPKS+LYL+GL LDF D LIGGGF F NPNA+ SCGCG SFGV Sbjct: 6 VVAFAMLASMIKGFIVAPTPGSSTGSCRS--SRVSGATTIR-------SHASAALSMSSTGVEDEVMEKIVNIRPKAMDHLQELRRSQGTEGDIFLRMGVRSGGCSGLSYIMDLVKKEEITEDDMVEEY--DGFKCVIDPKSVLYLYGLELDFSDALIGGGFQFQNPNAESSCGCGKSFGV 175
BLAST of EWM21820.1 vs. NCBI_GenBank
Match: gi|551579715|ref|XP_005775416.1| (iron-sulfur cluster assembly accessory protein, HesB/YadR/YfhF [Emiliania huxleyi CCMP1516] >gi|485627360|gb|EOD22987.1| iron-sulfur cluster assembly accessory protein, HesB/YadR/YfhF [Emiliania huxleyi CCMP1516]) HSP 1 Score: 147.902 bits (372), Expect = 1.047e-41 Identity = 63/111 (56.76%), Postives = 85/111 (76.58%), Query Frame = 0 Query: 85 VITVSDSALKHLEDLRAKQGVEHLYLRMGVRSGGCSGMSYVLDVMKPEEVTEEDHVESYSEHHFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 195 +I+ S+ AL +++LR K G E LRMGVR+GGCSGMSYV+D M+ E+ E+D Y + CV+DPKSL++L+GL+LD+ D+LIGGGF+F NPNA+E+CGCG SFGV Sbjct: 73 IISFSERALTQIQELREKSGKERACLRMGVRAGGCSGMSYVMDFMEEGEIDEKDTTIDYEQGTIRCVIDPKSLMFLYGLQLDYSDELIGGGFSFANPNAEETCGCGKSFGV 183
BLAST of EWM21820.1 vs. NCBI_GenBank
Match: gi|1072230542|gb|OEU15275.1| (hypothetical protein FRACYDRAFT_218226 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 146.362 bits (368), Expect = 1.555e-41 Identity = 63/113 (55.75%), Postives = 83/113 (73.45%), Query Frame = 0 Query: 83 ERVITVSDSALKHLEDLRAKQGVEHLYLRMGVRSGGCSGMSYVLDVMKPEEVTEEDHVESYSEHHFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 195 + VI + A+K L +LR KQ + L LRMGVR+GGCSG+SY++D ++V E+D ++ Y CVVD KS+LYL+GL LDF ++LIGGGF F NPNA++SCGCGSSFGV Sbjct: 39 DAVINIKPKAMKRLRELREKQKTDSLVLRMGVRNGGCSGLSYIMDFATEDDVQEDDAIDEYPGEKLKCVVDAKSMLYLYGLELDFSEELIGGGFKFFNPNAEDSCGCGSSFGV 151
BLAST of EWM21820.1 vs. NCBI_GenBank
Match: gi|397571940|gb|EJK48037.1| (hypothetical protein THAOC_33202 [Thalassiosira oceanica]) HSP 1 Score: 143.665 bits (361), Expect = 4.050e-40 Identity = 74/139 (53.24%), Postives = 93/139 (66.91%), Query Frame = 0 Query: 62 LGSSQLWAEVAEKSEGVSDV---TERVITVSDSALKHLEDLRAKQG--VEHLYLRMGVRSGGCSGMSYVLDVMKPEEVTEEDHVESYSEHHFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 195 LGSS A+V + SD + +I + + A+ L +L+ KQ L LRMGVR+GGCSG+SYV+D EE+ +ED V+ YS+ CVVD KSLLYL+GL LD+ D LIGGGF F NPNA+ESCGCGSSFGV Sbjct: 45 LGSSP--ADVEPPTTAASDYMPPEDAIIMIKEKAMDRLVELKQKQADPSSPLILRMGVRNGGCSGLSYVMDFSTEEEIQDEDEVDDYSQEGIKCVVDAKSLLYLYGLELDYSDDLIGGGFKFFNPNAEESCGCGSSFGV 181
BLAST of EWM21820.1 vs. NCBI_GenBank
Match: gi|505007457|ref|WP_015194559.1| (iron-sulfur cluster assembly accessory protein [Stanieria cyanosphaera] >gi|428270956|gb|AFZ36897.1| iron-sulfur cluster assembly accessory protein [Stanieria cyanosphaera PCC 7437]) HSP 1 Score: 138.272 bits (347), Expect = 1.082e-38 Identity = 63/110 (57.27%), Postives = 82/110 (74.55%), Query Frame = 0 Query: 86 ITVSDSALKHLEDLRAKQGVEHLYLRMGVRSGGCSGMSYVLDVMKPEEVTEEDHVESYSEHHFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 195 I ++D+ALKH++ LR +QG + LYLR+GVR GGCSGMSY++D +P +V + D V Y F V DPKSLLYL+GL LD+ + +IGGGF F NPNA ++CGCG SFGV Sbjct: 12 IQLTDTALKHIKMLREQQGNKELYLRVGVRQGGCSGMSYMMDFEEPNQVRDNDEVFDY--EGFKIVCDPKSLLYLYGLVLDYSNAMIGGGFQFTNPNAAQTCGCGKSFGV 119
BLAST of EWM21820.1 vs. NCBI_GenBank
Match: gi|873231188|emb|CEM08917.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 139.043 bits (349), Expect = 5.248e-38 Identity = 69/132 (52.27%), Postives = 91/132 (68.94%), Query Frame = 0 Query: 67 LWAEVAEKSEGVSDVTERVITVSDSALKHLEDLRAKQ---GVEHLYLRMGVRSGGCSGMSYVLDVMKPEEVTEEDHVESYSEHHFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 195 L +A +S G S + R I ++ AL+ + +LRAK+ G L LRMGV+SGGCSG+SY +D++ +V D VE+Y + F VVDPK+LLYLFG++LD+ D LIGGGF F NPNA +SCGCG SFGV Sbjct: 47 LRRALAVRSSGAS-TSRRAIDITPKALERIAELRAKKQRDGDGDLVLRMGVKSGGCSGLSYTMDLIDASDVGPRDTVEAYEDEGFKYVVDPKALLYLFGMQLDYCDDLIGGGFRFDNPNADKSCGCGMSFGV 177
BLAST of EWM21820.1 vs. NCBI_GenBank
Match: gi|545363608|ref|XP_005646925.1| (FeS cluster assembly accessory/regulatory protein [Coccomyxa subellipsoidea C-169] >gi|384248898|gb|EIE22381.1| FeS cluster assembly accessory/regulatory protein [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 135.961 bits (341), Expect = 8.300e-38 Identity = 68/111 (61.26%), Postives = 80/111 (72.07%), Query Frame = 0 Query: 85 VITVSDSALKHLEDLRAKQGVEHLYLRMGVRSGGCSGMSYVLDVMKPEEVTEEDHVESYSEHHFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 195 IT++++ALK+L+ LR G E + LRMGV+SGGCSGMSY +D K E V ED V Y E F V DPKSLLYLFG+RLD+ LIGGGF F NPNA+ SCGCG SFGV Sbjct: 19 AITLTEAALKNLKRLREDTGDEKVILRMGVKSGGCSGMSYHMDFEKEENVRAEDAVMEY-EDGFKLVCDPKSLLYLFGMRLDYSAALIGGGFQFHNPNAESSCGCGKSFGV 128
BLAST of EWM21820.1 vs. NCBI_GenBank
Match: gi|504994902|ref|WP_015182004.1| (iron-sulfur cluster assembly accessory protein [Microcoleus sp. PCC 7113] >gi|428251893|gb|AFZ17852.1| Iron-sulfur cluster assembly accessory protein [Microcoleus sp. PCC 7113]) HSP 1 Score: 135.191 bits (339), Expect = 1.650e-37 Identity = 65/113 (57.52%), Postives = 83/113 (73.45%), Query Frame = 0 Query: 83 ERVITVSDSALKHLEDLRAKQGVEHLYLRMGVRSGGCSGMSYVLDVMKPEEVTEEDHVESYSEHHFSCVVDPKSLLYLFGLRLDFKDQLIGGGFAFLNPNAQESCGCGSSFGV 195 +R I ++++ALKH+ LR +QG + LYLR+GVR GGCSGMSY++D P +V E+D V Y F V DPKS+LYL+GL LD+ D +IGGGF F NPNA +SCGCG SFGV Sbjct: 9 QRGIQLTEAALKHVLALRQRQG-KDLYLRVGVRQGGCSGMSYMMDFEDPSKVQEKDEVFDY--EGFKIVCDPKSMLYLYGLVLDYSDAMIGGGFQFTNPNASQSCGCGKSFGV 118 The following BLAST results are available for this feature:
BLAST of EWM21820.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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