EWM21817.1, cds8855 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21817.1 vs. NCBI_GenBank
Match: gi|585102158|gb|EWM21817.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 677.937 bits (1748), Expect = 0.000e+0 Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 0
Query: 1 MMGIRFSALLVAFLASIPYLLDLATRREYPVPPPEGAVVVTGASTGIGAHAAHSLARTGFLVFAGVRKELDGETLKAEAPTLESQENIVPIILDVTKQEQIDKAVQTVSSTLDSLGGRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLRASKGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEMGELGVSVSVVEPAYVTSAIFGKIATRMKETADSVSEKVMEVYGHLVQNPTYTRRCIEKASPPTVTSDAILDALTAKHPQTRYVVANVDGLSAKVIGWMIWMFNDRIKDKLIEISRLRQRKAQ 331
MMGIRFSALLVAFLASIPYLLDLATRREYPVPPPEGAVVVTGASTGIGAHAAHSLARTGFLVFAGVRKELDGETLKAEAPTLESQENIVPIILDVTKQEQIDKAVQTVSSTLDSLGGRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLRASKGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEMGELGVSVSVVEPAYVTSAIFGKIATRMKETADSVSEKVMEVYGHLVQNPTYTRRCIEKASPPTVTSDAILDALTAKHPQTRYVVANVDGLSAKVIGWMIWMFNDRIKDKLIEISRLRQRKAQ
Sbjct: 1 MMGIRFSALLVAFLASIPYLLDLATRREYPVPPPEGAVVVTGASTGIGAHAAHSLARTGFLVFAGVRKELDGETLKAEAPTLESQENIVPIILDVTKQEQIDKAVQTVSSTLDSLGGRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLRASKGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEMGELGVSVSVVEPAYVTSAIFGKIATRMKETADSVSEKVMEVYGHLVQNPTYTRRCIEKASPPTVTSDAILDALTAKHPQTRYVVANVDGLSAKVIGWMIWMFNDRIKDKLIEISRLRQRKAQ 331
BLAST of EWM21817.1 vs. NCBI_GenBank
Match: gi|553181318|ref|XP_005853543.1| (3-hydroxybutyrate dehydrogenase [Nannochloropsis gaditana CCMP526] >gi|422295513|gb|EKU22812.1| 3-hydroxybutyrate dehydrogenase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 670.618 bits (1729), Expect = 0.000e+0 Identity = 328/331 (99.09%), Postives = 329/331 (99.40%), Query Frame = 0
Query: 1 MMGIRFSALLVAFLASIPYLLDLATRREYPVPPPEGAVVVTGASTGIGAHAAHSLARTGFLVFAGVRKELDGETLKAEAPTLESQENIVPIILDVTKQEQIDKAVQTVSSTLDSLGGRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLRASKGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEMGELGVSVSVVEPAYVTSAIFGKIATRMKETADSVSEKVMEVYGHLVQNPTYTRRCIEKASPPTVTSDAILDALTAKHPQTRYVVANVDGLSAKVIGWMIWMFNDRIKDKLIEISRLRQRKAQ 331
MMGIRFSALLVAFLASIPYLLDLATRREYPVPPPEGAVVVTGASTGIGAHAAHSLAR GFLVFAGVRKELDGETLKAEAPTLESQENIVPIILDVTKQEQIDKAVQTVSSTLDSLGGRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLRASKGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEMGELGVSVSVVEPAYVTSAIFGKIATR+KETADSVSEKVMEVYGHLVQNPTYTRRCIEKASPPTVTSDAIL ALTAKHPQTRYVVANVDGLSAKVIGWMIWMFNDRIKDKLIEISRLRQRKAQ
Sbjct: 1 MMGIRFSALLVAFLASIPYLLDLATRREYPVPPPEGAVVVTGASTGIGAHAAHSLARAGFLVFAGVRKELDGETLKAEAPTLESQENIVPIILDVTKQEQIDKAVQTVSSTLDSLGGRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLRASKGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEMGELGVSVSVVEPAYVTSAIFGKIATRVKETADSVSEKVMEVYGHLVQNPTYTRRCIEKASPPTVTSDAILHALTAKHPQTRYVVANVDGLSAKVIGWMIWMFNDRIKDKLIEISRLRQRKAQ 331
BLAST of EWM21817.1 vs. NCBI_GenBank
Match: gi|553194466|ref|XP_005855962.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >gi|422293105|gb|EKU20405.1| short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 269.626 bits (688), Expect = 5.617e-85 Identity = 148/302 (49.01%), Postives = 189/302 (62.58%), Query Frame = 0
Query: 36 GAVVVTGASTGIGAHAAHSLARTGFLVFAGVRKELDGETLKAEAPTLESQE--------NIVP--------IILDVTKQEQIDKAVQTVSSTLDSLGGRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLR-ASKGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEMGELGVSVSVVEPAYVTSAIFGKIATRMKETADSVSEKVMEVYGHLVQNPTYTRRCIEKASPPTVTSDAILDALTAKHPQTRYVVANVDGLSAKVIGWMIWMFNDRIKDKLI 320
G V+VTGASTGIG HAA LAR GFLVFAGVRK DGE L ES++ + P +ILD+TK QI AV++V L GG P +GLVNNAGV G PVEF ++ R F+VNF+G +A T+AFL LLR A +GR+IN+SS+AG+ P Y +K+ALEA SD LRVE+G LGVSVSV++P Y+ S IFGK + + + E+ +YGHL T I KAS P V S AI ALT+ +P+TRY+V NV+G A +GW IW+ NDR+ D++I
Sbjct: 52 GGVLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGEALLKAYLDEESKQTSKSRSRGKVSPAKQGVLHYLILDITKPFQIAAAVRSVQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQAPQGRIINVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIFGKADEQHQHRMQELPEECSALYGHLY-TVDKTNALIAKASDPIVCSRAIHHALTSPYPKTRYLVGNVNGTPAYWLGWGIWLLNDRLMDRMI 352
BLAST of EWM21817.1 vs. NCBI_GenBank
Match: gi|585111466|gb|EWM28976.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 265.774 bits (678), Expect = 2.515e-83 Identity = 145/302 (48.01%), Postives = 187/302 (61.92%), Query Frame = 0
Query: 36 GAVVVTGASTGIGAHAAHSLARTGFLVFAGVRKELDGETL--------KAEAPTLESQENIVP--------IILDVTKQEQIDKAVQTVSSTLDSLGGRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLR-ASKGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEMGELGVSVSVVEPAYVTSAIFGKIATRMKETADSVSEKVMEVYGHLVQNPTYTRRCIEKASPPTVTSDAILDALTAKHPQTRYVVANVDGLSAKVIGWMIWMFNDRIKDKLI 320
G V+VTGASTGIG HAA LAR GFLVFAGVRK DGE L + S+ + P +ILD+TK QI AV++V L GG P +GLVNNAGV G PVEF ++ R F+VNF+G +A T+AFL LLR A +GR++N+SS+AG+ P Y +K+ALEA SD LRVE+G LGVSVSV++P Y+ S IFGK + + + + +YGHL T I KAS P V S AI ALT+ +P+TRY+V NV+G A +GW IW+ NDR+ D++I
Sbjct: 63 GGVLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGEALLRAYLDEESKQTSKSRSRGKVSPAKQGVLHFLILDITKPFQIAAAVRSVQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQAPQGRIVNVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIFGKADEQHQHRMQELPVECSALYGHLY-TVDKTNALIAKASDPIVCSRAIHHALTSPYPKTRYLVGNVNGTPAYWLGWGIWLLNDRLMDRMI 363
BLAST of EWM21817.1 vs. NCBI_GenBank
Match: gi|585107069|gb|EWM25314.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 252.292 bits (643), Expect = 1.513e-78 Identity = 137/314 (43.63%), Postives = 198/314 (63.06%), Query Frame = 0
Query: 8 ALLVAFLASIP--YLLDLATRREYPVPPPEGAVVVTGASTGIGAHAAHSLARTGFLVFAGVRKELDGETLKAEAPTLESQENIVPIILDVTKQEQIDKAVQTVSSTLDSLGGRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLRASKGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEMGELGVSVSVVEPAYVTSAIFGKIATRMKETADSVSEKVMEVYGHLVQNPTYT--RRCIEKASPPTVTSDAILDALTAKHPQTRYVVANVDGLSAKVIGWMIWMFNDRIKD 317
LL AF+ +I +L R+ +PVPP GA+V+TGASTGIG HAA LAR G++V+ VRK D E ++A N+ PII+DV + + I+ +T+ + L S PL+GLVNNAGV P+EF + DLR +FD++ G + T+ L +RA+KGR++N+SS+ L + P Y ASK A+E SD LR E+ + SVS+V+PAYV +AIF K+ T+ +T VS ++M YG+ + R ++KASPP+VT+DAI ALT+ +P TRY+VANV G+ A +GW++W+ DR+ D
Sbjct: 18 GLLGAFVLAIMSYHLTVFIFRKRFPVPPKGGAIVITGASTGIGNHAAQHLARQGYIVYCTVRKPADVEAIQALG-----LPNLRPIIMDVAQAKSIENGAETILAEL-SKNNIPLIGLVNNAGVA-QKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIRANKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIFKKV-TQSIDTKVEVSPEIMTTYGYFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPAFWLGWLVWLCPDRLAD 323
BLAST of EWM21817.1 vs. NCBI_GenBank
Match: gi|553192143|ref|XP_005855521.1| (1-acylglycerone phosphate reductase, partial [Nannochloropsis gaditana CCMP526] >gi|422293540|gb|EKU20840.1| 1-acylglycerone phosphate reductase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 234.572 bits (597), Expect = 9.214e-72 Identity = 134/301 (44.52%), Postives = 190/301 (63.12%), Query Frame = 0
Query: 9 LLVAF-LASIPYLLDLAT-RREYPVPPPEGAVVVTGASTGIGAHAAHSLARTGFLVFAGVRKELDGETLKAEAPTLESQENIVPIILDVTKQEQIDKAVQTVSSTLDSLGGRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLRASKGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEMGELGVSVSVVEPAYVTSAIFGKIATRMKETADSVSEKVMEVYGHLVQNPTYT--RRCIEKASPPTVTSDAILDALTAKHPQTRYVVANVDGLSAKVIG 305
LL AF LA + Y L + R+ +PVPP GA+V+TGASTGIG HAA LAR G++V+ VRK D E ++A N+ PII+DV + + I+ +T+ + L S PL+GLVNNAGV P+EF + DLR +FD++ G + T+ L +RA+KGR++N+SS+ L + P Y ASK A+E SD LR E+ + SVS+V+PAYV +AIF K+ T+ +T VS ++M YG+ + R ++KASPP+VT+DAI ALT+ +P TRY+VANV G+ A +G
Sbjct: 27 LLGAFVLAIMSYHLTVFIFRKRFPVPPKGGAIVITGASTGIGNHAAQHLARQGYIVYCTVRKPADVEAIQALG-----LPNLRPIIMDVAQAKSIENGAETILAEL-SKNNIPLIGLVNNAGVA-QKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIRANKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIFKKV-TQSIDTKVEVSPEIMTTYGYFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPAFWLG 319
BLAST of EWM21817.1 vs. NCBI_GenBank
Match: gi|514686056|ref|XP_004990606.1| (oxidoreductase [Salpingoeca rosetta] >gi|326431692|gb|EGD77262.1| oxidoreductase [Salpingoeca rosetta]) HSP 1 Score: 227.254 bits (578), Expect = 7.547e-69 Identity = 130/310 (41.94%), Postives = 189/310 (60.97%), Query Frame = 0
Query: 9 LLVAFLASIPYLLDLATRREYPVPPPEGAVVVTGASTGIGAHAAHSLARTGFLVFAGVRKELDGETLKAEAPTLESQENIVPIILDVTKQEQIDKAVQTVSSTLDSLGGRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLRASKGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEMGELGVSVSVVEPAYVTSAIFGKIATRMKETADSVSEKVMEVYGHLVQNPTYTRRCIEK-ASPPTVTSDAILDALTAKHPQTRYVVANVDGLSAKVIGWMIWMFNDRIKD 317
+L+ LA + YLL + + +PV GA+++TG STGIG HAA LA+ G+ V+A VRK+ D ++LK E ++PI++DVTK +QI AV T+ GG L+GLVNNAG+ + P+E +D +R +F+VN FG ++ T+AFL ++R +KGR++N+ SLAG P Y A+K+ LE +DALR EM GVSVS+VEPAYV++AI K +T VS ++ + Y + R E A P VT+ AI ALT++ P+TRY+VAN G+ AK+ + W+ DR+ D
Sbjct: 8 VLMGILAVLLYLLFVFPVKYFPVHD-SGAILITGTSTGIGRHAAVELAKKGYTVYATVRKQADVDSLKKEG-----VNTLIPIVMDVTKPDQIASAVDTIKK-----GGHKLIGLVNNAGIS-ARVPLEAHDLDRIRSMFEVNVFGVVSVTQAFLPMIRENKGRIVNVGSLAGFIAMPGSASYSATKFGLEGLNDALRREMAPFGVSVSIVEPAYVSTAIASK-STGEAAATRWVSREMQDTYAWFFADFEEKRLKGEALADGPEVTTKAITHALTSRTPETRYIVANTYGIPAKIAALINWLLPDRLGD 304
BLAST of EWM21817.1 vs. NCBI_GenBank
Match: gi|585111467|gb|EWM28977.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 224.557 bits (571), Expect = 2.033e-67 Identity = 128/270 (47.41%), Postives = 163/270 (60.37%), Query Frame = 0
Query: 36 GAVVVTGASTGIGAHAAHSLARTGFLVFAGVRKELDGETL--------KAEAPTLESQENIVP--------IILDVTKQEQIDKAVQTVSSTLDSLGGRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLR-ASKGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEMGELGVSVSVVEPAYVTSAIFGKIATRMKETADSVSEKVMEVYGHLVQNPTYTRRCIEKASPPTVTSDAILDALTAKHPQ 288
G V+VTGASTGIG HAA LAR GFLVFAGVRK DGE L + S+ + P +ILD+TK QI AV++V L GG P +GLVNNAGV G PVEF ++ R F+VNF+G +A T+AFL LLR A +GR++N+SS+AG+ P Y +K+ALEA SD LRVE+G LGVSVSV++P Y+ S IFGK + + + + +YGHL T I KAS P V S AI ALT+ +P+
Sbjct: 63 GGVLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGEALLRAYLDEESKQTSKSRSRGKVSPAKQGVLHFLILDITKPFQIAAAVRSVQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQAPQGRIVNVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIFGKADEQHQHRMQELPVECSALYGHLY-TVDKTNALIAKASDPIVCSRAIHHALTSPYPK 331
BLAST of EWM21817.1 vs. NCBI_GenBank
Match: gi|553192526|ref|XP_005855590.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >gi|422293482|gb|EKU20782.1| short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 222.246 bits (565), Expect = 4.193e-67 Identity = 135/303 (44.55%), Postives = 190/303 (62.71%), Query Frame = 0
Query: 22 DLATRREYPVPPPEGA-VVVTGASTGIGAHAAHSLARTGFLVFAGVRKELDGETLKAEAPTLESQENIVPIILDVTKQEQIDKAVQTVSSTLDSLG-GRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLRASKGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEMGELGVSVSVVEPAYVTSAIFGK--IATRMKETADSVSEKVMEVYGHLVQNPTYTRRCIEKASPPTVTSDAILDALTAKHPQTRYVVANVDGLSAKVIGWMIWMFNDRIKDKLI 320
+ A+RREYP PP GA VV++GASTGIG AA LA F+V+AGVRKE D E L++ + +VP+ILDVT Q+ ID+A V T D+ G P+ GLVNNAG+ ++ VE + ++ ++DVN +G + T+ FL LLRA GR++ ISS+AG P + YC+SK ALE+ SD LR+E+ VSV+VV+P V SAIF K A++ K D + ++VYGH+++ + T + KA P T+ AI AL ++P+TR VVAN+DGL A +M M DR+ DK++
Sbjct: 19 NYASRREYPTPPSGGAAVVLSGASTGIGYDAAVHLA-DDFVVYAGVRKEKDAEMLRSVG-----KSTLVPVILDVTSQDSIDEAY--VKITADAAERGIPVWGLVNNAGIMTAST-VEHHDVAGMQKIYDVNVWGVLRLTQKFLPLLRAQAGRIVQISSIAGFLTIPRASGYCSSKHALESLSDGLRLELAHYNVSVTVVQPGAVRSAIFEKSQSASQAKLAEDP---RELKVYGHMIKEGS-TDSIMAKADTPDCTTKAIRQALMDRYPKTREVVANIDGLPAIFAHYMKHMLPDRVLDKML 308
BLAST of EWM21817.1 vs. NCBI_GenBank
Match: gi|585105737|gb|EWM24343.1| (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 222.631 bits (566), Expect = 3.414e-66 Identity = 135/303 (44.55%), Postives = 190/303 (62.71%), Query Frame = 0
Query: 22 DLATRREYPVPPPEGA-VVVTGASTGIGAHAAHSLARTGFLVFAGVRKELDGETLKAEAPTLESQENIVPIILDVTKQEQIDKAVQTVSSTLDSLG-GRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLRASKGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEMGELGVSVSVVEPAYVTSAIFGK--IATRMKETADSVSEKVMEVYGHLVQNPTYTRRCIEKASPPTVTSDAILDALTAKHPQTRYVVANVDGLSAKVIGWMIWMFNDRIKDKLI 320
+ A+RREYP PP GA VV++GASTGIG AA LA F+V+AGVRKE D E L++ + +VP+ILDVT Q+ ID+A V T D+ G P+ GLVNNAG+ ++ VE + ++ ++DVN +G + T+ FL LLRA GR++ ISS+AG P + YC+SK ALE+ SD LR+E+ VSV+VV+P V SAIF K A++ K D + ++VYGH+++ + T + KA P T+ AI AL ++P+TR VVAN+DGL A +M M DR+ DK++
Sbjct: 111 NYASRREYPTPPSGGAAVVLSGASTGIGYDAAVHLA-DDFVVYAGVRKEKDAEMLRSVG-----KSTLVPVILDVTSQDSIDEAY--VKITADAAERGIPVWGLVNNAGIMTAST-VEHHDVAGMQKIYDVNVWGVLRLTQKFLPLLRAQAGRIVQISSIAGFLTIPRASGYCSSKHALESLSDGLRLELAHYNVSVTVVQPGAVRSAIFEKSQSASQAKLAEDP---RELKVYGHMIKEGS-TDSIMAKADTPDCTTKAIRQALMDRYPKTREVVANIDGLPAIFAHYMKHMLPDRVLDKML 400 The following BLAST results are available for this feature:
BLAST of EWM21817.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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