EWM21853.1, cds8848 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21853.1 vs. NCBI_GenBank
Match: gi|585102195|gb|EWM21853.1| (Uncharacterized protein family UPF0172 [Nannochloropsis gaditana]) HSP 1 Score: 385.185 bits (988), Expect = 1.976e-135 Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0
Query: 1 MVELQALPTLKILLHTAKYPHAEVCGLLLGPVNDVPIIDDAVPLFHHITVGPLMETAFLMVEQYANSEGKRLAGFYHAAAQANEPETHPLMVTLVGKELASHRPDAILLRVKNEALSSRAAVPFEVLPLPGVEGAPKVVPVTVSPRGIQAFDQVSGNGKFAACRSLVDMDEHFDDARRDFRNRHVGDFL 189
MVELQALPTLKILLHTAKYPHAEVCGLLLGPVNDVPIIDDAVPLFHHITVGPLMETAFLMVEQYANSEGKRLAGFYHAAAQANEPETHPLMVTLVGKELASHRPDAILLRVKNEALSSRAAVPFEVLPLPGVEGAPKVVPVTVSPRGIQAFDQVSGNGKFAACRSLVDMDEHFDDARRDFRNRHVGDFL
Sbjct: 1 MVELQALPTLKILLHTAKYPHAEVCGLLLGPVNDVPIIDDAVPLFHHITVGPLMETAFLMVEQYANSEGKRLAGFYHAAAQANEPETHPLMVTLVGKELASHRPDAILLRVKNEALSSRAAVPFEVLPLPGVEGAPKVVPVTVSPRGIQAFDQVSGNGKFAACRSLVDMDEHFDDARRDFRNRHVGDFL 189
BLAST of EWM21853.1 vs. NCBI_GenBank
Match: gi|584082191|ref|XP_006760919.1| (PREDICTED: ER membrane protein complex subunit 9 [Myotis davidii] >gi|432106946|gb|ELK32467.1| UPF0172 protein FAM158A [Myotis davidii]) HSP 1 Score: 99.3673 bits (246), Expect = 1.460e-22 Identity = 66/189 (34.92%), Postives = 98/189 (51.85%), Query Frame = 0
Query: 2 VELQALPTLKILLHTAKYPHAEVCGLLLGPV---NDVPIIDDAVPLFH-HITVGPLMETAFLMVEQYANSEGKRLAGFYHAAAQANEPETHPLMVTLVGKELASHRPDAILLRVKNEALSSRAAV-PFEVLPLPGVEGAPKVVPVTVSPRGIQAFDQVSGNGKFAACRSLVDMDEHFDDARRDFRNRHV 185
VE+ A K+ LH A+YPHA V GLLL P + + D VPLFH H+ + ++E A VE + G LAG+YHA A + PL + + G+ +A PDA+L+ + N+ L S+ V P VL G+ PK + + ++ V + A + LVD D H DD R+D+ N+ +
Sbjct: 4 VEISARAYGKMCLHAARYPHAAVNGLLLAPAPQSGECLCLTDCVPLFHSHLALSVMLEVALHQVEMWGAQAGLVLAGYYHANAALGDQSPGPLALKIAGR-IAEFFPDAVLIMLDNQKLVSQPHVPPVIVLENHGLRWVPKDKNLVMWRDWEESRQMVGALLESRAQQHLVDFDCHLDDIRQDWTNQQL 191
BLAST of EWM21853.1 vs. NCBI_GenBank
Match: gi|31542298|ref|NP_057133.2| (ER membrane protein complex subunit 9 isoform a [Homo sapiens] >gi|397475407|ref|XP_003809130.1| PREDICTED: ER membrane protein complex subunit 9 [Pan paniscus] >gi|530403899|ref|XP_005267778.1| PREDICTED: ER membrane protein complex subunit 9 isoform X1 [Homo sapiens] >gi|675700562|ref|XP_008959475.1| PREDICTED: ER membrane protein complex subunit 9 [Pan paniscus] >gi|116241305|sp|Q9Y3B6.3|EMC9_HUMAN RecName: Full=ER membrane protein complex subunit 9; AltName: Full=Protein FAM158A >gi|12803345|gb|AAH02491.1| Family with sequence similarity 158, member A [Homo sapiens] >gi|119586507|gb|EAW66103.1| chromosome 14 open reading frame 122, isoform CRA_a [Homo sapiens] >gi|119586508|gb|EAW66104.1| chromosome 14 open reading frame 122, isoform CRA_a [Homo sapiens] >gi|649108580|gb|AIC51365.1| FAM158A, partial [synthetic construct] >gi|1147677537|emb|SJX29276.1| unnamed protein product, partial [Human ORFeome Gateway entry vector]) HSP 1 Score: 98.5969 bits (244), Expect = 2.808e-22 Identity = 64/190 (33.68%), Postives = 99/190 (52.11%), Query Frame = 0
Query: 2 VELQALPTLKILLHTAKYPHAEVCGLLLGPV---NDVPIIDDAVPLFH-HITVGPLMETAFLMVEQYANSEGKRLAGFYHAAAQANEPETHPLMVTLVGKELASHRPDAILLRVKNEALSSRAAV-PFEVLPLPGVEGAPKVVPVTVSPRGIQAFDQVSGNGKFAACRSLVDMDEHFDDARRDFRNRHVG 186
VE+ AL +K+ LH A+YPHA V GL L P + + D VPLFH H+ + ++E A V+ + G +AG+YHA A N+ PL + + G+ +A PDA+L+ + N+ L + V P VL G+ PK + + ++ V + A + LVD D H DD R+D+ N+ +
Sbjct: 4 VEISALAYVKMCLHAARYPHAAVNGLFLAPAPRSGECLCLTDCVPLFHSHLALSVMLEVALNQVDVWGAQAGLVVAGYYHANAAVNDQSPGPLALKIAGR-IAEFFPDAVLIMLDNQKLVPQPRVPPVIVLENQGLRWVPKDKNLVMWRDWEESRQMVGALLEDRAHQHLVDFDCHLDDIRQDWTNQRLN 192
BLAST of EWM21853.1 vs. NCBI_GenBank
Match: gi|641732633|ref|XP_008156689.1| (PREDICTED: ER membrane protein complex subunit 9 [Eptesicus fuscus]) HSP 1 Score: 98.2117 bits (243), Expect = 3.113e-22 Identity = 65/189 (34.39%), Postives = 99/189 (52.38%), Query Frame = 0
Query: 2 VELQALPTLKILLHTAKYPHAEVCGLLLGPV---NDVPIIDDAVPLFH-HITVGPLMETAFLMVEQYANSEGKRLAGFYHAAAQANEPETHPLMVTLVGKELASHRPDAILLRVKNEALSSRAAV-PFEVLPLPGVEGAPKVVPVTVSPRGIQAFDQVSGNGKFAACRSLVDMDEHFDDARRDFRNRHV 185
VE+ A +K+ LH A+YPHA V GLLL P + + D VPLFH H+ + ++E A V+ + G LAG+YHA A + PL + + G+ +A PDA+L+ + N+ L S+ V P VL G+ PK + + ++ V + A + LVD D H DD R+D+ N+ +
Sbjct: 4 VEISARAYVKMCLHAARYPHAAVNGLLLAPAPQSGECLCLTDCVPLFHSHLALSVMLEVALNQVDVWGAQAGLVLAGYYHANAALGDQSPGPLALKIAGR-IAEFFPDAVLIMLDNQKLVSQPHVPPVIVLENQGLCWVPKDKNLVMWRDWEESRQMVGALLESRAQQHLVDFDCHLDDIRQDWTNQQL 191
BLAST of EWM21853.1 vs. NCBI_GenBank
Match: gi|478493807|ref|XP_004421253.1| (PREDICTED: ER membrane protein complex subunit 9 [Ceratotherium simum simum]) HSP 1 Score: 98.2117 bits (243), Expect = 3.147e-22 Identity = 69/193 (35.75%), Postives = 104/193 (53.89%), Query Frame = 0
Query: 2 VELQALPTLKILLHTAKYPHAEVCGLLLGPV---NDVPIIDDAVPLFH-HITVGPLMETAFLMVEQYANSEGKRLAGFYHAAAQANEPETHPLMVTLVGKELASHRPDAILLRVKNEALSSRAAV-PFEVLPLPGVEGAPKVVPVTVSPRGIQAFDQVSG---NGKFAACRSLVDMDEHFDDARRDFRNRHVG 186
VE+ A +K+ LH A+YPHA V GLLL PV D + D VPLFH H+ + ++E A V+ + G +AG+YHA A ++ PL + + G+ +A PDA+L+ + N+ L + V P VL G+ PK + V R + Q+ G +G+ A + LVD D H DD R+D+ N+ +
Sbjct: 4 VEISARAYVKMCLHAARYPHAAVNGLLLAPVPRSEDCLCLTDCVPLFHSHLALSVMLEVALNQVDVWGAQAGLVVAGYYHANAALDDQSPGPLALKIAGR-IAEFFPDAVLIMLDNQKLVPQPHVPPVIVLENHGLRWVPKDKNL-VMWRDWEESRQMVGTLLDGR--AYQHLVDFDCHLDDIRQDWTNQQLN 192
BLAST of EWM21853.1 vs. NCBI_GenBank
Match: gi|1124021089|ref|XP_019570016.1| (PREDICTED: ER membrane protein complex subunit 9 isoform X6 [Rhinolophus sinicus]) HSP 1 Score: 98.2117 bits (243), Expect = 3.653e-22 Identity = 64/189 (33.86%), Postives = 99/189 (52.38%), Query Frame = 0
Query: 2 VELQALPTLKILLHTAKYPHAEVCGLLLGPV---NDVPIIDDAVPLFH-HITVGPLMETAFLMVEQYANSEGKRLAGFYHAAAQANEPETHPLMVTLVGKELASHRPDAILLRVKNEALSSRAAV-PFEVLPLPGVEGAPKVVPVTVSPRGIQAFDQVSGNGKFAACRSLVDMDEHFDDARRDFRNRHV 185
VE+ A +K+ LH A+YPHA V GLLL P + + D VPLFH H+ + ++E A V+ + G +AG+YHA A N+ PL + + G+ +A PDA+L+ + N+ L ++ V P VL G PK + + ++ V + A + LVD D H DD R+D+ N+ +
Sbjct: 4 VEISARAYVKMCLHAARYPHAAVNGLLLAPAPASGECLCLTDCVPLFHSHLALSVMLEVALNQVDVWGAQAGLVVAGYYHANAALNDQSPGPLALKIAGR-IAEFFPDAVLIMLDNQKLVPQSHVPPVIVLENHGARWVPKDKNLVMWRDWEESRQMVGALLEGRAYQHLVDFDCHLDDIRQDWTNQQL 191
BLAST of EWM21853.1 vs. NCBI_GenBank
Match: gi|344298734|ref|XP_003421046.1| (PREDICTED: ER membrane protein complex subunit 9 [Loxodonta africana]) HSP 1 Score: 97.8265 bits (242), Expect = 4.975e-22 Identity = 64/190 (33.68%), Postives = 100/190 (52.63%), Query Frame = 0
Query: 2 VELQALPTLKILLHTAKYPHAEVCGLLLGP---VNDVPIIDDAVPLFH-HITVGPLMETAFLMVEQYANSEGKRLAGFYHAAAQANEPETHPLMVTLVGKELASHRPDAILLRVKNEALSSRAAV-PFEVLPLPGVEGAPKVVPVTVSPRGIQAFDQVSGNGKFAACRSLVDMDEHFDDARRDFRNRHVG 186
VE+ A +K+ LH A+YPHA V GLLL P + + D VPLFH H+ + ++E A V+ + G +AG+YHA A ++ PL + + G+ +A PDA+L+ + N+ L + V P VL G+ APK + + ++ V + A + LVD D H DD R+D+ N+ +
Sbjct: 4 VEISARAYVKMCLHAARYPHAAVNGLLLAPAPRTGECLCLTDCVPLFHSHLALSVMLEVALNQVDVWGAQGGLVVAGYYHANAALDDQSPGPLALKIAGR-IAEFFPDAVLIMLDNQKLVPQPRVPPVIVLENHGLRWAPKDKNLVMWRDWEESRQMVGALLEGRAHQHLVDFDSHLDDIRQDWTNQQLN 192
BLAST of EWM21853.1 vs. NCBI_GenBank
Match: gi|1147273888|ref|XP_020018528.1| (ER membrane protein complex subunit 9 isoform X1 [Castor canadensis]) HSP 1 Score: 97.8265 bits (242), Expect = 5.378e-22 Identity = 65/193 (33.68%), Postives = 100/193 (51.81%), Query Frame = 0
Query: 2 VELQALPTLKILLHTAKYPHAEVCGLLLGPV---NDVPIIDDAVPLFH-HITVGPLMETAFLMVEQYANSEGKRLAGFYHAAAQANEPETHPLMVTLVGKELASHRPDAILLRVKNEALSSRAAV-PFEVLPLPGVEGAPKVVPVTVSPRGIQAFDQVSGNGKFAACRS---LVDMDEHFDDARRDFRNRHVG 186
VE+ A +K+ LH A+YPHA V GLLL P + + D VPLFH H+ + ++E A V+ + G +AG+YHA A ++ PL + + G+ +A PDA+L+ + N+ L + V P VL G+ PK + + ++ V G CR+ LVD D H DD R+D+ N+ +
Sbjct: 4 VEISARAYVKMCLHAARYPHAAVNGLLLAPAPRSGECLCLTDCVPLFHSHLALSVMLEVALNQVDVWGTQAGLVVAGYYHANAALDDQSPGPLALKIAGR-IAEFFPDAVLIMLDNKKLVPQPRVPPVIVLESQGLRWVPKDKNLVMWRDWEESRQMV---GALLECRAHQHLVDFDCHLDDIRQDWTNQQLN 192
BLAST of EWM21853.1 vs. NCBI_GenBank
Match: gi|297694781|ref|XP_002824649.1| (PREDICTED: ER membrane protein complex subunit 9 [Pongo abelii] >gi|686744970|ref|XP_009247241.1| PREDICTED: ER membrane protein complex subunit 9 [Pongo abelii]) HSP 1 Score: 97.8265 bits (242), Expect = 5.553e-22 Identity = 64/190 (33.68%), Postives = 99/190 (52.11%), Query Frame = 0
Query: 2 VELQALPTLKILLHTAKYPHAEVCGLLLGPV---NDVPIIDDAVPLFH-HITVGPLMETAFLMVEQYANSEGKRLAGFYHAAAQANEPETHPLMVTLVGKELASHRPDAILLRVKNEALSSRAAV-PFEVLPLPGVEGAPKVVPVTVSPRGIQAFDQVSGNGKFAACRSLVDMDEHFDDARRDFRNRHVG 186
VE+ AL +K+ LH A+YPHA V GL L P + + D VPLFH H+ + ++E A V+ + G +AG+YHA A N+ PL + + G+ +A PDA+L+ + N+ L + V P VL G+ PK + + ++ V + A + LVD D H DD R+D+ N+ +
Sbjct: 4 VEISALAYVKMCLHAARYPHAAVNGLFLAPAPRSGECLCLTDCVPLFHSHLALSVMLEVALNQVDVWGAQAGLVVAGYYHANAAVNDQSPGPLALKIAGR-IAEFFPDAVLIMLDNQKLVPQPRVPPVIVLENQGLCWVPKDKNLVMWRDWEESRQMVGALLEDRAHQHLVDFDCHLDDIRQDWTNQRLN 192
BLAST of EWM21853.1 vs. NCBI_GenBank
Match: gi|34978962|gb|AAQ83690.1| (CGI-112 protein [Homo sapiens]) HSP 1 Score: 97.0561 bits (240), Expect = 8.966e-22 Identity = 64/189 (33.86%), Postives = 99/189 (52.38%), Query Frame = 0
Query: 2 VELQALPTLKILLHTAKYPHAEVCGLLLGPV---NDVPIIDDAVPLFH-HITVGPLMETAFLMVEQYANSEGKRLAGFYHAAAQANEPETHPLMVTLVGKELASHRPDAILLRVKNEALSSRAAV-PFEVLPLPGVEGAPKVVPVTVSPRGIQAFDQVSGNGKFAACRSLVDMDEHFDDARRDFRNRHV 185
VE+ AL +K+ LH A+YPHA V GL L P + + D VPLFH H+ + ++E A V+ + G +AG+YHA A N+ PL + + G+ +A PDA+L+ + N+ L + V P VL G+ PK + + ++ V + A + LVD D H DD R+D+ N+ +
Sbjct: 4 VEISALAYVKMCLHAARYPHAAVNGLFLAPAPRSGEGLCLTDCVPLFHSHLALSVMLEVALNQVDVWGAQAGLVVAGYYHANAAVNDQSPGPLALKIAGR-IAEFFPDAVLIMLDNQKLVPQPRVPPVIVLENQGLRWVPKDKNLVMWRDWEESRQMVGALLEDRAHQHLVDFDCHLDDIRQDWTNQRL 191 The following BLAST results are available for this feature:
BLAST of EWM21853.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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