EWM21824.1, cds8843 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21824.1 vs. NCBI_GenBank
Match: gi|585102166|gb|EWM21824.1| (superoxide dismutase [Nannochloropsis gaditana]) HSP 1 Score: 487.649 bits (1254), Expect = 2.316e-174 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
Query: 1 MKTYCAVFGAVSLAVASHAFMVGSPLTGVSKAPASSSTVRMAVALPPLPFEDTALEPLISKRTLDIHHGKHHAKYVTVTNEMIKGTDLENASLEEIVKAAKGKNQGLFNNAAQVWNHNFYWNCIKPNGGGKPTGKVAALIDRDLGGFEAFRKQFAADSNGNFGSGWTWLAMDGDKLKIVKTSNADLPLTQGMTPLLVIDVWEHAYYLDVQNVRAQYVDNFLDKLVNWDFVNANLA 235
MKTYCAVFGAVSLAVASHAFMVGSPLTGVSKAPASSSTVRMAVALPPLPFEDTALEPLISKRTLDIHHGKHHAKYVTVTNEMIKGTDLENASLEEIVKAAKGKNQGLFNNAAQVWNHNFYWNCIKPNGGGKPTGKVAALIDRDLGGFEAFRKQFAADSNGNFGSGWTWLAMDGDKLKIVKTSNADLPLTQGMTPLLVIDVWEHAYYLDVQNVRAQYVDNFLDKLVNWDFVNANLA
Sbjct: 1 MKTYCAVFGAVSLAVASHAFMVGSPLTGVSKAPASSSTVRMAVALPPLPFEDTALEPLISKRTLDIHHGKHHAKYVTVTNEMIKGTDLENASLEEIVKAAKGKNQGLFNNAAQVWNHNFYWNCIKPNGGGKPTGKVAALIDRDLGGFEAFRKQFAADSNGNFGSGWTWLAMDGDKLKIVKTSNADLPLTQGMTPLLVIDVWEHAYYLDVQNVRAQYVDNFLDKLVNWDFVNANLA 235
BLAST of EWM21824.1 vs. NCBI_GenBank
Match: gi|1101034806|gb|OIN98432.1| (superoxide dismutase [Desulfovibrionaceae bacterium CG1_02_65_16]) HSP 1 Score: 264.233 bits (674), Expect = 1.031e-86 Identity = 119/188 (63.30%), Postives = 141/188 (75.00%), Query Frame = 0
Query: 47 PLPFEDTALEPLISKRTLDIHHGKHHAKYVTVTNEMIKGTDLENASLEEIVKAAKGKNQGLFNNAAQVWNHNFYWNCIKPNGGGKPTGKVAALIDRDLGGFEAFRKQFAADSNGNFGSGWTWLAMDGDKLKIVKTSNADLPLTQGMTPLLVIDVWEHAYYLDVQNVRAQYVDNFLDKLVNWDFVNANL 234
PLP++ ALEP+IS RTL+ H+GKHHA YV +++ G+ LE SLEEIVKA+ K GLFNNAAQ WNH FYW C+KP GGG PTGK+AA I GGF+AFRK F + G FGSGW WL +G KLK++ T+NAD PL G TPLLV+DVWEHAYYLD QN RA Y++ F+DKLVNWDFV ANL
Sbjct: 10 PLPYDKAALEPVISARTLEFHYGKHHAAYVANVKKLLPGSGLEGKSLEEIVKASAAKGGGLFNNAAQSWNHAFYWKCMKPGGGGAPTGKLAAAISASFGGFDAFRKAFVGAAAGQFGSGWGWLVEEGGKLKVMATANADTPLAHGATPLLVVDVWEHAYYLDYQNRRADYLNAFMDKLVNWDFVAANL 197
BLAST of EWM21824.1 vs. NCBI_GenBank
Match: gi|1189883660|ref|WP_085883764.1| (superoxide dismutase [Fe] [Oceanibacterium hippocampi] >gi|1188043345|emb|SLN55888.1| Superoxide dismutase [Fe] [Oceanibacterium hippocampi]) HSP 1 Score: 261.151 bits (666), Expect = 2.182e-85 Identity = 123/197 (62.44%), Postives = 141/197 (71.57%), Query Frame = 0
Query: 41 MAVALPPLPFEDTALEPLISKRTLDIHHGKHHAKYVTVTNEMIKGTDLENASLEEIVKAAKGK--NQGLFNNAAQVWNHNFYWNCIKPNGGGKPTGKVAALIDRDLGGFEAFRKQFAADSNGNFGSGWTWLAMDGDKLKIVKTSNADLPLTQGMTPLLVIDVWEHAYYLDVQNVRAQYVDNFLDKLVNWDFVNANLA 235
M + LP LP++ ALEP IS RTL+ HHGKHH YVT N+MI+GTDL ASLE I+KA+ GK G+FNNAAQVWNH FYWN + P GGGKPTG +AA ID DLGG++AF + F FGSGW WL +DG KLK+ KT NADLPL G T +L DVWEHAYYLD QN R Y+ FL LVNWDF NANLA
Sbjct: 1 MTIELPNLPYDKAALEPHISARTLEFHHGKHHQTYVTNLNKMIEGTDLAGASLEAIIKASAGKADKAGIFNNAAQVWNHTFYWNSMAPKGGGKPTGAIAAKIDSDLGGYDAFAEAFKNAGATQFGSGWAWLVLDGGKLKVTKTPNADLPLAHGQTAILTADVWEHAYYLDYQNRRPDYLATFLSSLVNWDFANANLA 197
BLAST of EWM21824.1 vs. NCBI_GenBank
Match: gi|1082339933|gb|OFX05334.1| (superoxide dismutase [Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_12]) HSP 1 Score: 260.766 bits (665), Expect = 2.826e-85 Identity = 118/193 (61.14%), Postives = 142/193 (73.58%), Query Frame = 0
Query: 43 VALPPLPFEDTALEPLISKRTLDIHHGKHHAKYVTVTNEMIKGTDLENASLEEIVKAAKGKNQGLFNNAAQVWNHNFYWNCIKPNGGGKPTGKVAALIDRDLGGFEAFRKQFAADSNGNFGSGWTWLAMDGDKLKIVKTSNADLPLTQGMTPLLVIDVWEHAYYLDVQNVRAQYVDNFLDKLVNWDFVNANLA 235
+ LP LP++ AL P IS+ T++ H+GKHH YV N +I+G L ASLEEIV+AAKG +QGLFNNAAQVWNH FYW ++PNGGG P G +AA+IDR GG++AF +QFA G FGSGW WL GDKL+I KT NA+ PLT+G+TPLL +DVWEHAYYLD QN R Y+ FL LVNWDF N NLA
Sbjct: 2 IELPELPYDRKALAPHISENTINFHYGKHHKAYVDKVNSLIEGGKLATASLEEIVRAAKGTDQGLFNNAAQVWNHTFYWRSMRPNGGGAPKGDIAAMIDRSFGGYDAFSRQFADAGAGQFGSGWAWLVKAGDKLEIRKTPNAETPLTEGVTPLLTMDVWEHAYYLDYQNQRPTYIGKFLSDLVNWDFANENLA 194
BLAST of EWM21824.1 vs. NCBI_GenBank
Match: gi|737581723|ref|WP_035552873.1| (superoxide dismutase [Hyphomonas atlantica] >gi|630778270|gb|KCZ59723.1| superoxide dismutase [Hyphomonas atlantica]) HSP 1 Score: 258.07 bits (658), Expect = 3.967e-84 Identity = 124/198 (62.63%), Postives = 145/198 (73.23%), Query Frame = 0
Query: 41 MAVALPPLPFEDTALEPLISKRTLDIHHGKHHAKYVTVTNEMIKGTDLENASLEEIVK--AAKGKNQGLFNNAAQVWNHNFYWNCIKPNGGGKPTGKVAALIDRDLGGFEAFRKQFAADSNGNFGSGWTWLAMDGDKLKIVKTSNADLPLTQ-GMTPLLVIDVWEHAYYLDVQNVRAQYVDNFLDKLVNWDFVNANLA 235
MA +LP LP+E AL P IS+ TL+ HHGKHHA YV N +I+GTDLEN SLE I+K AA GLFNNAAQVWNH FYW+C+KP+GGGKP GKVA LIDRDLGG++ F K F A G FGSGW WL KL I KT NA+ P+T G TP+L +DVWEHAYYLD QN R Y+D+F++ L+NWDFVN NLA
Sbjct: 1 MAFSLPDLPYERDALAPHISEETLNFHHGKHHAAYVNNLNGLIEGTDLENESLESIIKTAAADSGKAGLFNNAAQVWNHTFYWHCMKPSGGGKPHGKVAELIDRDLGGYDQFVKDFKAAGGGQFGSGWAWLVYKDGKLHITKTPNAETPVTDMGATPVLTMDVWEHAYYLDYQNSRPNYMDSFINNLINWDFVNQNLA 198
BLAST of EWM21824.1 vs. NCBI_GenBank
Match: gi|749071203|ref|WP_040098145.1| (superoxide dismutase [Geoalkalibacter ferrihydriticus] >gi|748431771|gb|KIH76973.1| superoxide dismutase [Geoalkalibacter ferrihydriticus DSM 17813] >gi|1086473516|emb|SDL41562.1| superoxide dismutase, Fe-Mn family [Geoalkalibacter ferrihydriticus]) HSP 1 Score: 257.684 bits (657), Expect = 4.311e-84 Identity = 117/197 (59.39%), Postives = 143/197 (72.59%), Query Frame = 0
Query: 41 MAVALPPLPFEDTALEPLISKRTLDIHHGKHHAKYVTVTNEMIKGTDLENASLEEIVKAAKGKNQ--GLFNNAAQVWNHNFYWNCIKPNGGGKPTGKVAALIDRDLGGFEAFRKQFAADSNGNFGSGWTWLAMDGDKLKIVKTSNADLPLTQGMTPLLVIDVWEHAYYLDVQNVRAQYVDNFLDKLVNWDFVNANLA 235
M + LP LPF ALEP IS RT + HHGKHH YV N++++G+DL+ S+EEI+K G + G+FNN AQVWNH FYW C+KP GGG+P+GK+A I D GGF+ F ++F A FGSGW WL +DG KLK+ KT+NA+ PLTQGMTPLL +DVWEHAYYLD QN R Y+ F+DKLVNWDFVNANL
Sbjct: 1 MTLVLPELPFAPNALEPHISARTFEFHHGKHHKAYVDNGNKLLEGSDLKGLSMEEIMKKTAGDSAKAGIFNNVAQVWNHAFYWKCMKPGGGGQPSGKIAEKIKADFGGFDKFVEEFKAAGATQFGSGWAWLVLDGGKLKVTKTANAECPLTQGMTPLLTMDVWEHAYYLDYQNRRPDYIATFIDKLVNWDFVNANLG 197
BLAST of EWM21824.1 vs. NCBI_GenBank
Match: gi|504964556|ref|WP_015151658.1| (superoxide dismutase [Oscillatoria acuminata] >gi|428004206|gb|AFY85049.1| superoxide dismutase [Oscillatoria acuminata PCC 6304]) HSP 1 Score: 257.684 bits (657), Expect = 5.744e-84 Identity = 113/192 (58.85%), Postives = 141/192 (73.44%), Query Frame = 0
Query: 41 MAVALPPLPFEDTALEPLISKRTLDIHHGKHHAKYVTVTNEMIKGTDLENASLEEIVKAA--KGKNQGLFNNAAQVWNHNFYWNCIKPNGGGKPTGKVAALIDRDLGGFEAFRKQFAADSNGNFGSGWTWLAMDGDKLKIVKTSNADLPLTQGMTPLLVIDVWEHAYYLDVQNVRAQYVDNFLDKLVNWDFV 230
M LPPLPF+ TALEP +SK TL+ HH KHHAKYV+ N+M+KGTD+E+ S+EE++KA GLFNNAAQ WNH FYWNCIKP+GGGKP+G +A I D G F+ F+++F ++ FGSGW WL +D LK+ KTSNA+ P+ GMTPLL IDVWEHAYYLD QN R Y++ F+ L+NWDFV
Sbjct: 1 MTYELPPLPFDYTALEPHVSKSTLEFHHDKHHAKYVSNYNDMVKGTDMESKSIEEVIKATYNDSSKSGLFNNAAQAWNHTFYWNCIKPSGGGKPSGALADKIAADFGSFDKFKEEFTTAASTQFGSGWAWLVLDKGTLKVTKTSNAENPIAMGMTPLLTIDVWEHAYYLDYQNKRPDYIETFISSLINWDFV 192
BLAST of EWM21824.1 vs. NCBI_GenBank
Match: gi|515873970|ref|WP_017304553.1| (superoxide dismutase [Spirulina subsalsa]) HSP 1 Score: 254.603 bits (649), Expect = 6.866e-83 Identity = 116/197 (58.88%), Postives = 141/197 (71.57%), Query Frame = 0
Query: 41 MAVALPPLPFEDTALEPLISKRTLDIHHGKHHAKYVTVTNEMIKGTDLENASLEEIVKAAKGK--NQGLFNNAAQVWNHNFYWNCIKPNGGGKPTGKVAALIDRDLGGFEAFRKQFAADSNGNFGSGWTWLAMDGDKLKIVKTSNADLPLTQGMTPLLVIDVWEHAYYLDVQNVRAQYVDNFLDKLVNWDFVNANLA 235
MA LPPLP++ TAL+P ISK TL+ HH KHHA YV N ++GTD ++ S+EE++KA G G+FNNAAQ WNH+FYWNC+KPNGGG PTG +A I D G FEAF++ FA FGSGW WL +DG LK+ KT NA+ P+T G TPLL +DVWEHAYYLD QN R +Y++ FL LVNWDFV NLA
Sbjct: 1 MAYQLPPLPYDYTALDPYISKSTLEFHHDKHHAAYVNNYNAAVQGTDYDSQSIEEVIKAVAGDPDKAGIFNNAAQAWNHSFYWNCMKPNGGGTPTGALADKIAADFGSFEAFKEAFAKAGATQFGSGWAWLVLDGGTLKVTKTLNAENPMTAGQTPLLTMDVWEHAYYLDYQNARPKYIETFLSSLVNWDFVAQNLA 197
BLAST of EWM21824.1 vs. NCBI_GenBank
Match: gi|656720185|gb|KEF42890.1| (superoxide dismutase [Cyanobium sp. CACIAM 14]) HSP 1 Score: 254.603 bits (649), Expect = 7.095e-83 Identity = 120/197 (60.91%), Postives = 142/197 (72.08%), Query Frame = 0
Query: 41 MAVALPPLPFEDTALEPLISKRTLDIHHGKHHAKYVTVTNEMIKGTDLENASLEEIVKAAKGK--NQGLFNNAAQVWNHNFYWNCIKPNGGGKPTGKVAALIDRDLGGFEAFRKQFAADSNGNFGSGWTWLAMDGDKLKIVKTSNADLPLTQGMTPLLVIDVWEHAYYLDVQNVRAQYVDNFLDKLVNWDFVNANLA 235
MA LP LP+ ALEP IS++TL+ HHGKHHA YVT N+ I+GTDLE SLEE++ A G G+FNNAAQVWNH+FYW C+KP GGG+P+G +A I+ D G FEAF++QF FGSGW WL +DG LKI KT+NADLPL G LL +DVWEHAYYLD QN R Y+ FLDKLVNW+FV ANLA
Sbjct: 1 MAHQLPELPYGLDALEPHISRQTLEFHHGKHHAAYVTNLNKAIEGTDLEGKSLEEVILAVAGDAGKAGVFNNAAQVWNHSFYWQCMKPGGGGEPSGALAEKINADFGSFEAFKEQFKTAGATQFGSGWAWLVLDGGTLKITKTANADLPLAHGQKALLTMDVWEHAYYLDYQNRRPDYMTTFLDKLVNWEFVAANLA 197
BLAST of EWM21824.1 vs. NCBI_GenBank
Match: gi|1071033854|ref|WP_069791939.1| (superoxide dismutase [Cyanobacterium sp. IPPAS B-1200] >gi|1070622227|gb|OEJ77400.1| superoxide dismutase [Cyanobacterium sp. IPPAS B-1200]) HSP 1 Score: 254.603 bits (649), Expect = 7.173e-83 Identity = 117/197 (59.39%), Postives = 142/197 (72.08%), Query Frame = 0
Query: 41 MAVALPPLPFEDTALEPLISKRTLDIHHGKHHAKYVTVTNEMIKGTDLENASLEEIVKAAKG--KNQGLFNNAAQVWNHNFYWNCIKPNGGGKPTGKVAALIDRDLGGFEAFRKQFAADSNGNFGSGWTWLAMDGDKLKIVKTSNADLPLTQGMTPLLVIDVWEHAYYLDVQNVRAQYVDNFLDKLVNWDFVNANLA 235
M L PLP++ TALEP ISK TL+ HH KHHA YV+ N+ +KGT+LE+ S+EE++K+ G G+FNNAAQ WNH+FYW C+KPNGGG PTG++AA ID D G F+ F + F A FGSGW WL +D LK+ KT NAD P+T G TPLL +DVWEHAYYLD QN R Y+D+FL KLVNWDFV NLA
Sbjct: 1 MTYELAPLPYDYTALEPCISKSTLEFHHDKHHAAYVSKYNDAVKGTELESKSIEEVIKSIAGDASKAGVFNNAAQAWNHSFYWQCMKPNGGGTPTGELAAKIDADFGSFDKFVEAFKAAGATQFGSGWAWLVLDNGTLKVTKTGNADNPITAGQTPLLTMDVWEHAYYLDYQNKRPAYIDDFLGKLVNWDFVAQNLA 197 The following BLAST results are available for this feature:
BLAST of EWM21824.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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