EWM21839.1, cds8821 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21839.1 vs. NCBI_GenBank
Match: gi|585102181|gb|EWM21839.1| (protein polybromo-1 [Nannochloropsis gaditana]) HSP 1 Score: 1784.23 bits (4620), Expect = 0.000e+0 Identity = 880/880 (100.00%), Postives = 880/880 (100.00%), Query Frame = 0 Query: 1 MKLVQALGQLSEKAGRKATSSRYSFDKPVVVMFPQVAAAYLARIAKPMDTSTLRVQLKAHQYGSPKEFLLDMDLIFANAIAFNDGAATPYEQEVVLVSNYLRRHLDRLALECLPLEEEYKPGERLNLSEQRRDENRQQMEEKASRQLATMAGGDVYGRFAYQEMRELIQQLKKERRVGEFFWEEVNRNENQGYYRVIARPICFRDILKSMDTETGVRVGQVVADIRLIYQNALQFNSGTETLVPISRVICEAARLLQRRLEEKLPLVYLRIAENVERQSELREKLKVLRAEDERQRHAELAALTTDQNAAGLAGGEALGPKGGLAGKGAGAVSPAAAGGPSLHFPSPGVDAPSPRFRSDMEQAAGHSQSGRVGGNPAVGDLPQTGSLLANKLRKEKRREAELDRKHEERRRKERESKLKERITQEVWARAQKAREKMFAAKEQSSALKQKGEEDEGGREGAMGGQQDTQNVSLGRDVSATADVRVEDNGGGAAFQPVDLSRLGTKPGRRHSGRVERQPVRSLLAELFPTVGHDEEAKSTSLGKELDTATGDDKQNGGGTITEDLFAQLNRVPAPEAAIRGDIDTSEKGEEEGAEDEESLSVCSSLRDAGDDALWEDSDERARLRRLRLLLRVVRAPDILGGSEGGGHSEEGAAGPWAPSLMHVTVIADVEDRVLGEEDRGAHGGAKRRSRRVKLQSQRPVGLEINGGERRLILQGERQKVRAGSLEAAVALRLGGQVEVQLIVPLAPRSDFSSTSISVPNTPALENIRYRECPVLAPLFHEAKEWCKGSQRADLDMPSAFRWTWGRRGCQPGTAADFYHWLAGLNLAIWEEGDVAFSPSIREEERPPHCSSPKAQSGDRCGGISTCLVLVISLEVKCDKM 880 MKLVQALGQLSEKAGRKATSSRYSFDKPVVVMFPQVAAAYLARIAKPMDTSTLRVQLKAHQYGSPKEFLLDMDLIFANAIAFNDGAATPYEQEVVLVSNYLRRHLDRLALECLPLEEEYKPGERLNLSEQRRDENRQQMEEKASRQLATMAGGDVYGRFAYQEMRELIQQLKKERRVGEFFWEEVNRNENQGYYRVIARPICFRDILKSMDTETGVRVGQVVADIRLIYQNALQFNSGTETLVPISRVICEAARLLQRRLEEKLPLVYLRIAENVERQSELREKLKVLRAEDERQRHAELAALTTDQNAAGLAGGEALGPKGGLAGKGAGAVSPAAAGGPSLHFPSPGVDAPSPRFRSDMEQAAGHSQSGRVGGNPAVGDLPQTGSLLANKLRKEKRREAELDRKHEERRRKERESKLKERITQEVWARAQKAREKMFAAKEQSSALKQKGEEDEGGREGAMGGQQDTQNVSLGRDVSATADVRVEDNGGGAAFQPVDLSRLGTKPGRRHSGRVERQPVRSLLAELFPTVGHDEEAKSTSLGKELDTATGDDKQNGGGTITEDLFAQLNRVPAPEAAIRGDIDTSEKGEEEGAEDEESLSVCSSLRDAGDDALWEDSDERARLRRLRLLLRVVRAPDILGGSEGGGHSEEGAAGPWAPSLMHVTVIADVEDRVLGEEDRGAHGGAKRRSRRVKLQSQRPVGLEINGGERRLILQGERQKVRAGSLEAAVALRLGGQVEVQLIVPLAPRSDFSSTSISVPNTPALENIRYRECPVLAPLFHEAKEWCKGSQRADLDMPSAFRWTWGRRGCQPGTAADFYHWLAGLNLAIWEEGDVAFSPSIREEERPPHCSSPKAQSGDRCGGISTCLVLVISLEVKCDKM Sbjct: 1 MKLVQALGQLSEKAGRKATSSRYSFDKPVVVMFPQVAAAYLARIAKPMDTSTLRVQLKAHQYGSPKEFLLDMDLIFANAIAFNDGAATPYEQEVVLVSNYLRRHLDRLALECLPLEEEYKPGERLNLSEQRRDENRQQMEEKASRQLATMAGGDVYGRFAYQEMRELIQQLKKERRVGEFFWEEVNRNENQGYYRVIARPICFRDILKSMDTETGVRVGQVVADIRLIYQNALQFNSGTETLVPISRVICEAARLLQRRLEEKLPLVYLRIAENVERQSELREKLKVLRAEDERQRHAELAALTTDQNAAGLAGGEALGPKGGLAGKGAGAVSPAAAGGPSLHFPSPGVDAPSPRFRSDMEQAAGHSQSGRVGGNPAVGDLPQTGSLLANKLRKEKRREAELDRKHEERRRKERESKLKERITQEVWARAQKAREKMFAAKEQSSALKQKGEEDEGGREGAMGGQQDTQNVSLGRDVSATADVRVEDNGGGAAFQPVDLSRLGTKPGRRHSGRVERQPVRSLLAELFPTVGHDEEAKSTSLGKELDTATGDDKQNGGGTITEDLFAQLNRVPAPEAAIRGDIDTSEKGEEEGAEDEESLSVCSSLRDAGDDALWEDSDERARLRRLRLLLRVVRAPDILGGSEGGGHSEEGAAGPWAPSLMHVTVIADVEDRVLGEEDRGAHGGAKRRSRRVKLQSQRPVGLEINGGERRLILQGERQKVRAGSLEAAVALRLGGQVEVQLIVPLAPRSDFSSTSISVPNTPALENIRYRECPVLAPLFHEAKEWCKGSQRADLDMPSAFRWTWGRRGCQPGTAADFYHWLAGLNLAIWEEGDVAFSPSIREEERPPHCSSPKAQSGDRCGGISTCLVLVISLEVKCDKM 880
BLAST of EWM21839.1 vs. NCBI_GenBank
Match: gi|1210523899|dbj|GAX17223.1| (protein polybromo-1 [Fistulifera solaris]) HSP 1 Score: 98.2117 bits (243), Expect = 3.702e-17 Identity = 82/287 (28.57%), Postives = 146/287 (50.87%), Query Frame = 0 Query: 18 ATSSRYSFDKPVVVMFPQVAAAYLARIAKPMDTSTLRVQLKA-HQYGSPKEFLLDMDLIFANAIAFN-DG--AATPYEQEVVLVSNYLRRHLDRLALECL-------------PLEEEYKPGERLNLSEQRRDENRQQMEEKASRQ-LATMAGGDVYGRFAYQ--EMRELIQQLKKE---RRVGEFFWEEVNRNENQGYYRVIARPICFRDILKSMDTETGVRVGQVVADIRLIYQNALQFNS---GTETLVPISRVICEAARLLQRRLEEKLPLVYLRIAENVERQ 278 A+ ++ F PV ++FP + +Y +I KPMD +T+ L A ++Y +P++FL D+ L+F+NAI FN DG P S +L R+ ++LE L P + P L+E R + RQ+MEE ++ + GD R+ +Q E +L++ L+ + +++G F + Y IA+P+ + + +++ + V+AD+RLI+ NAL++NS GT+T S E+A + R+LE + + L +++ +ER+ Sbjct: 830 ASRPKFIFHVPVPILFPDLRESYSTKIRKPMDLTTVECTLLAGNKYATPEDFLQDVALVFSNAIRFNKDGRDIGDPLSCAYYDASVHLLRYSRWMSLELLQKYVDANSELVDEPTADSLPPFS-WKLTEGNRKKARQEMEELLMKEPIERSLEGD---RYTWQEAECEKLLKALRHQSDVKQMGYF----IKTFYPPDYKAFIAKPMDWDAVNRNLKKRHYTKFSDVIADLRLIFSNALRYNSRWKGTDT---DSGRAYESAVFMSRKLEMAINKMMLSVSDRLERE 1105
BLAST of EWM21839.1 vs. NCBI_GenBank
Match: gi|1210522696|dbj|GAX18709.1| (hypothetical protein FisN_10Hh077 [Fistulifera solaris]) HSP 1 Score: 97.0561 bits (240), Expect = 9.680e-17 Identity = 88/311 (28.30%), Postives = 156/311 (50.16%), Query Frame = 0 Query: 18 ATSSRYSFDKPVVVMFPQVAAAYLARIAKPMDTSTLRVQLKA-HQYGSPKEFLLDMDLIFANAIAFN-DG--AATPYEQEVVLVSNYLRRHLDRLALECLPLEEEYKPGERL--------------NLSEQRRDENRQQMEEKASRQ-LATMAGGDVYGRFAYQ--EMRELIQQLKKE---RRVGEFFWEEVNRNENQGYYRVIARPICFRDILKSMDTETGVRVGQVVADIRLIYQNALQFNS---GTETLVPISRVICEAARLLQRRLEEKLPLVYLRIAENVERQ-----SELREKLKVLRAEDERQR 296 A+ ++ F PV ++FP + +Y +I KPMD +T+ L A ++Y +P++FL D+ L+F+NAI FN DG P S +L R+ ++LE L++ P L L+E R RQ+MEE ++ + GD R+ +Q E +L++ L+ + +++G F + Y IA+P+ + + +++ + V+AD+RLI+ NAL++N+ GT+T S E+A + R+LE + + L +++ +ER+ + RE RAE+E+ R Sbjct: 775 ASRPKFIFHVPVPILFPDLRESYSTKIRKPMDLTTVECTLLAGNKYAAPEDFLQDVALVFSNAIRFNKDGRDIGDPLSCAYYDASVHLLRYSRWMSLEL--LQKYVDPNSELVDEPTADGLPPFSWKLTEGNRKRARQEMEELLMKEPIERSLEGD---RYTWQEAECEKLLKALRHQSDVKQMGYF----IKTFYPPDYKAFIAKPMDWDAVNRNLKKRHYTKFNDVIADLRLIFSNALRYNARWKGTDT---DSGRAYESAVFMSRKLEMAINKMMLSVSDRLERERIDHSNAEREIAVAERAEEEKIR 1073
BLAST of EWM21839.1 vs. NCBI_GenBank
Match: gi|397569218|gb|EJK46606.1| (hypothetical protein THAOC_34720 [Thalassiosira oceanica]) HSP 1 Score: 83.1889 bits (204), Expect = 1.617e-12 Identity = 80/315 (25.40%), Postives = 149/315 (47.30%), Query Frame = 0 Query: 4 VQALGQLSEKAGRKATSSRYSFDKPVVVMFPQVAAAYLARIAKPMDTSTLRVQLKAHQYGSPKEFLLDMDLIFANAIAFN-------DGAATPYEQEVVLVSNYLRRHLDRLALECL-PLEEEYK--------PGERLNLSEQRRDENRQQMEEKASRQLATMA-GGDVYGRFAYQEMRELIQQLKK--ERRVGEFFWEEVNRNENQGYYRVIARPICF---RDILKSMDTETGVRVGQVVADIRLIYQNALQFNSGTETLVPISRVICEAARLLQRRLEEKLPLVYLRIAENVERQSELREKLKVLRAEDERQR 296 ++ QL + A +Y F PV ++FP++ +Y +I PMD +T +L Y + +EF+ D+ L+FANAI FN +G + Y + S +L ++ ++LE L P + L+++ R R++ME +L GD Y + E L++ ++ + + ++F E + + Y I++PI + D LK T +G+VV D+RLI+ NAL++N G + S+ ++A+ + ++LE + + L + + + R E + + V R + +QR Sbjct: 692 LKFFKQLMKHPWVSAERPKYIFHVPVPILFPEIRVSYAEKIKNPMDLTTAESKLLQGVYENAEEFVRDIALVFANAIEFNKEGHDLGEGMSCAYYE----ASTHLLKYSRWISLEILQPFLSKSSSSVVVESGAAASWKLTQRNRMFARKEMESIVFGELIDRTEPGDRYS-WTETECERLMKSIRHMSDMKHMQYFLEMSSLPADYTAY--ISKPIAWGLCNDKLKERRYAT---IGEVVDDLRLIFANALKYNEGPRHVNVTSQSAYDSAKYMSQKLEAAIDKMLLSVGDRIGR--ERVDMMTVRRDMEAKQR 994
BLAST of EWM21839.1 vs. NCBI_GenBank
Match: gi|813167765|ref|XP_012203876.1| (hypothetical protein SPRG_09393 [Saprolegnia parasitica CBS 223.65] >gi|641531374|gb|KDO25450.1| hypothetical protein SPRG_09393 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 79.337 bits (194), Expect = 2.684e-11 Identity = 60/216 (27.78%), Postives = 107/216 (49.54%), Query Frame = 0 Query: 25 FDKPVVVMFPQVAAAYLARIAKPMDTSTLRVQLKAHQYGSPKEFLLDMDLIFANAIAFNDGAATPYEQEVVLVSNYLRRHLDRLALECLPLEEEYKPGER----LNLSEQRRDENRQQMEEKASRQLATMAGGDVYGRFAYQEMRELIQQLKKERRVGEFFWEEVNRNENQGYYRVIARPICFRDILKSMDTETGVRVGQVVADIRLIYQNALQFN 236 FD P++ +FP +AA+Y +A+PMD T+R +L AHQ S EF+ L+FANA AFN G+ + V ++ +LR D + +E L+ + + R L + R E++ E S+ L + Y ++A+ + + E++ Y+ +I +P+ + + + + + T G+ +ADIRL ++NAL +N Sbjct: 768 FDVPLLSIFPDLAASYERVVAEPMDLGTMRQRLLAHQLPSAAEFVRLGHLVFANAEAFNVGSDSS-SIRVREMAAHLRWFFDSMCIEHKLLDADVRLERRNERFLGVQTLRFTESKPNKE--CSKVLRVLLSQK-YQKYAWPFVEPV---------------EKLFPGLPPKYFEIITKPMDLKTVSEKLSSLTYKTYGEFIADIRLTFENALLYN 964
BLAST of EWM21839.1 vs. NCBI_GenBank
Match: gi|669153356|ref|XP_008612240.1| (hypothetical protein SDRG_08149 [Saprolegnia diclina VS20] >gi|530736136|gb|EQC34378.1| hypothetical protein SDRG_08149 [Saprolegnia diclina VS20]) HSP 1 Score: 78.5666 bits (192), Expect = 4.581e-11 Identity = 62/224 (27.68%), Postives = 108/224 (48.21%), Query Frame = 0 Query: 25 FDKPVVVMFPQVAAAYLARIAKPMDTSTLRVQLKAHQYGSPKEFLLDMDLIFANAIAFNDGAATPYEQEVVLVSNYLRRHLDRLALECLPLEEEYKPGERLNLSEQRRDE------NRQQMEEKASRQLATMAGGDVYGRFAYQEMRELIQQLKKERRVGEFFWEEVNRNEN------QGYYRVIARPICFRDILKSMDTETGVRVGQVVADIRLIYQNALQFN 236 FD P++ +FP +AA+Y + +PMD T+R +L AHQ S EF+ L+FANA AFN G+ + V ++ +LR D + +E L+ E L +RR+E + E K +++ + + +R L+ Q + ++ W V E Y+ +I +P+ + + + + + T G+ +ADIRL ++NAL +N Sbjct: 761 FDVPLLRIFPDLAASYERVVTEPMDLGTMRQRLLAHQLPSAAEFVRLGHLVFANAEAFNVGSDSS-SIRVREMAAHLRWFFDSMCMEHKLLDAE--------LRLERRNERFLGVQTLRFTESKPNKECSKV-------------LRVLLSQ-----KYQKYAWPFVEPVEKLFPGLPPKYFEIITKPMDLKTVSEKLTSLTYKTYGEFIADIRLTFENALLYN 957
BLAST of EWM21839.1 vs. NCBI_GenBank
Match: gi|635370923|emb|CCI41000.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 76.6406 bits (187), Expect = 1.523e-10 Identity = 77/284 (27.11%), Postives = 133/284 (46.83%), Query Frame = 0 Query: 21 SRYSFDKPVVVMFPQVAAAYLARIAKPMDTSTLRVQLKAHQYGSPKEFLLDMDLIFANAIAFNDGAATPYEQEVVLVSNYLRRHLDRLALECLPLEEEYKPGE--RLNLSEQRRDENRQQMEEKASRQLATMAGGDVYGRFAYQEMRELIQQLKKERRVGEFFWEEVNRNENQGYYRVIARPICFRDILKSMDTETGVRVGQVVADIRLIYQNALQFNSGTETLVPISRVICEAARLLQRRLEEKLPLVYLRIAENVERQSELR-EKLKVLRAE-DERQRHAEL 300 S+ FD+P++ +FPQ+ YL I +PMD +TLR QL++H +P EF+ LIF NAI FN + L + +HL + L E+ GE R+ L ++R D + E +R+ + G + YQ+ Q+ K F E + Y+ +I P+ I +++ G + D+RL ++NA+ +N + S + AA + + +++ V L +AE + R+ LR E+ +++ A+ E QR E+ Sbjct: 882 SKLHFDQPLLKIFPQLTTEYLKMIGEPMDIATLRSQLQSHAISAPAEFVRKGSLIFQNAIDFNSAG-----DDASLHVREMSQHL-LWYFQSLCTEQTLISGEEARVELRKERADVIQNIALEIKARECQKLLRGLQSQK--YQKNSWPFQKPVK----ALFPLLEAD------YFELIKTPMDLATIQDKLNSFEYSTYGDFIRDVRLTFENAILYNRADKGREGWS--VYGAAVSMLKVIDDLWGTVTLEVAEKLRRREVLRKERERIMEAKRREEQRLKEI 1145
BLAST of EWM21839.1 vs. NCBI_GenBank
Match: gi|1173953908|gb|OQS01417.1| (hypothetical protein ACHHYP_01063 [Achlya hypogyna]) HSP 1 Score: 76.2554 bits (186), Expect = 2.163e-10 Identity = 63/221 (28.51%), Postives = 106/221 (47.96%), Query Frame = 0 Query: 25 FDKPVVVMFPQVAAAYLARIAKPMDTSTLRVQLKAHQYGSPKEFLLDMDLIFANAIAFNDGAATPYEQEVVLVSNYLRRHLDRLALECLPLEEEYKPGERLNLSEQRRDENRQQMEEKASRQLATMAGGDVYGRFA-YQEMRELIQQLKK--ERRVGEFFW------EEVNRNENQGYYRVIARPICFRDILKSMDTETGVRVGQVVADIRLIYQNALQFN 236 FD P++ +FP +A +Y +++PMD T+R QL AH S +EF+ +FANA FN G + V ++ +LR D + +E RL LS + R E RQ+ R LA RF + RE ++ L+ ++ ++ W E++ N Y+ +I +P+ + I ++ G+ +AD+RL ++NAL +N Sbjct: 739 FDVPLLSIFPDLAVSYKRVVSEPMDLGTMRAQLLAHSIPSAEEFVRLGHTVFANAERFNVGTDSS-SVRVREMAAHLRWFFDSMCIE-----------HRL-LSPELRQERRQE------RFLAVQT-----LRFTESKPNRECVKVLRVLLSQKYQKYCWPFLEPVEKLFPNLPPKYFEIITKPMDLKTISDKLNGLQYKTYGEFIADVRLTFENALVYN 935
BLAST of EWM21839.1 vs. NCBI_GenBank
Match: gi|953499044|emb|CEG39356.1| (Transcription initiation factor TFIID, subunit BDF1 and related bromodomain proteins [Plasmopara halstedii]) HSP 1 Score: 73.1738 bits (178), Expect = 1.061e-9 Identity = 62/240 (25.83%), Postives = 111/240 (46.25%), Query Frame = 0 Query: 6 ALGQLSEKAGRKATSSRYSFDKPVVVMFPQVAAAYLARIAKPMDTSTLRVQLKAHQYGSPKEFLLDMDLIFANAIAFN---DGAATPYEQEVVLVSNYLRRHLDRLALECLPLEEEYKPGERLNLSEQRRDENRQQMEEKASRQLATMAGGDVYGRFAYQEMRELIQQLKKERRVGEF------FWEEVNRNENQGYYRVIARPICFRDILKSMDTETGVRVGQVVADIRLIYQNALQFN 236 A ++ + G+ S+ F+ P++ +FPQ+A Y + IA+PMD TLR QL AH + +FL + LIF NA+ FN D A+T +V +S +L + D L E L GE+ S +RD+ R++ E S + + Q++ ++ K ++ F + + + Y+ ++ P+ I + + G + D+RL ++NA+ +N Sbjct: 50 ACDRVLNRLGKIEQVSKLHFNHPLLEVFPQLATEYKSLIAEPMDLRTLREQLHAHAL-TQADFLYNGRLIFQNAMRFNCADDSAST----QVREMSAHLLWYFDSLCAEMLITSGPEVTGEQ---SRAKRDQLRRERAEFVSTVPVELKAKEC------QKLLRVLNSQKHDKNCWPFRKPVRVLFPALTSD----YFDIVKTPMDLSTIAEKLTAFEYKMHGDFIRDVRLTFENAMVYN 271
BLAST of EWM21839.1 vs. NCBI_GenBank
Match: gi|939629805|ref|XP_014275890.1| (PREDICTED: protein polybromo-1 isoform X3 [Halyomorpha halys]) HSP 1 Score: 72.0182 bits (175), Expect = 4.716e-9 Identity = 63/251 (25.10%), Postives = 115/251 (45.82%), Query Frame = 0 Query: 25 FDKPVVVMFPQVAAAYLARIAKPMDTSTLRVQLKAHQYGSPKEFLLDMDLIFANAIAFNDGAATPYEQEVVLVSNYLRRHLDRLALECLPLEEEYKPGERLNLSEQRRD-ENRQQMEEKASRQLATMAGGDV---YGRFAYQEMRELIQQLK-----KERRVGEFFWEEVNRNENQGYYRVIARPICFRDILKSMDTETGVRVGQVVADIRLIYQNALQFNSGTETLVPISRVICEAARLLQRRLEEKLPL 266 +KP ++P+ Y I KP+D T+ ++A +Y S +E L D L+F N FN+ + YE + L LR + L PL + KP E+ L E + E+R+ + + ++T V +MR L ++ K R++ + F + ++ E YY VI +PI I + + + + + + +D+ L++ NA ++N P S++ +A L + ++ KL L Sbjct: 543 MEKPSKKLYPE----YYKVIDKPIDMLTIEANIRAEKYQSEEEILSDFKLMFQNCRKFNEEGSMIYEDAIKL-EKILRDKVKELG----PLNDS-KPTEKKVLREHKEHREHREPRDRDSKSSISTPKPKKVNKSVDSVTLHKMRTLFNTIRDFKDQKGRQLSQIFIKLPSKVEYPDYYEVIKKPINLEQISQKLKSSSYDGLDDLCSDLILMFDNACKYNE------PDSQIYKDALTLQKVVMQTKLQL 777 The following BLAST results are available for this feature:
BLAST of EWM21839.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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