EWM21839.1, cds8821 (CDS) Nannochloropsis gaditana

Overview
NameEWM21839.1
Unique Namecds8821
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:304413..306945 +
Alignment locationKK037250.1:307023..307132 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21839.1
Productprotein polybromo-1
Orig transcript idgnl|cribi|Naga_100051g3.8878.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:304413..306945 +
KK037250.1supercontigKK037250.1:307023..307132 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
Homology
BLAST of EWM21839.1 vs. NCBI_GenBank
Match: gi|585102181|gb|EWM21839.1| (protein polybromo-1 [Nannochloropsis gaditana])

HSP 1 Score: 1784.23 bits (4620), Expect = 0.000e+0
Identity = 880/880 (100.00%), Postives = 880/880 (100.00%), Query Frame = 0
Query:    1 MKLVQALGQLSEKAGRKATSSRYSFDKPVVVMFPQVAAAYLARIAKPMDTSTLRVQLKAHQYGSPKEFLLDMDLIFANAIAFNDGAATPYEQEVVLVSNYLRRHLDRLALECLPLEEEYKPGERLNLSEQRRDENRQQMEEKASRQLATMAGGDVYGRFAYQEMRELIQQLKKERRVGEFFWEEVNRNENQGYYRVIARPICFRDILKSMDTETGVRVGQVVADIRLIYQNALQFNSGTETLVPISRVICEAARLLQRRLEEKLPLVYLRIAENVERQSELREKLKVLRAEDERQRHAELAALTTDQNAAGLAGGEALGPKGGLAGKGAGAVSPAAAGGPSLHFPSPGVDAPSPRFRSDMEQAAGHSQSGRVGGNPAVGDLPQTGSLLANKLRKEKRREAELDRKHEERRRKERESKLKERITQEVWARAQKAREKMFAAKEQSSALKQKGEEDEGGREGAMGGQQDTQNVSLGRDVSATADVRVEDNGGGAAFQPVDLSRLGTKPGRRHSGRVERQPVRSLLAELFPTVGHDEEAKSTSLGKELDTATGDDKQNGGGTITEDLFAQLNRVPAPEAAIRGDIDTSEKGEEEGAEDEESLSVCSSLRDAGDDALWEDSDERARLRRLRLLLRVVRAPDILGGSEGGGHSEEGAAGPWAPSLMHVTVIADVEDRVLGEEDRGAHGGAKRRSRRVKLQSQRPVGLEINGGERRLILQGERQKVRAGSLEAAVALRLGGQVEVQLIVPLAPRSDFSSTSISVPNTPALENIRYRECPVLAPLFHEAKEWCKGSQRADLDMPSAFRWTWGRRGCQPGTAADFYHWLAGLNLAIWEEGDVAFSPSIREEERPPHCSSPKAQSGDRCGGISTCLVLVISLEVKCDKM 880
            MKLVQALGQLSEKAGRKATSSRYSFDKPVVVMFPQVAAAYLARIAKPMDTSTLRVQLKAHQYGSPKEFLLDMDLIFANAIAFNDGAATPYEQEVVLVSNYLRRHLDRLALECLPLEEEYKPGERLNLSEQRRDENRQQMEEKASRQLATMAGGDVYGRFAYQEMRELIQQLKKERRVGEFFWEEVNRNENQGYYRVIARPICFRDILKSMDTETGVRVGQVVADIRLIYQNALQFNSGTETLVPISRVICEAARLLQRRLEEKLPLVYLRIAENVERQSELREKLKVLRAEDERQRHAELAALTTDQNAAGLAGGEALGPKGGLAGKGAGAVSPAAAGGPSLHFPSPGVDAPSPRFRSDMEQAAGHSQSGRVGGNPAVGDLPQTGSLLANKLRKEKRREAELDRKHEERRRKERESKLKERITQEVWARAQKAREKMFAAKEQSSALKQKGEEDEGGREGAMGGQQDTQNVSLGRDVSATADVRVEDNGGGAAFQPVDLSRLGTKPGRRHSGRVERQPVRSLLAELFPTVGHDEEAKSTSLGKELDTATGDDKQNGGGTITEDLFAQLNRVPAPEAAIRGDIDTSEKGEEEGAEDEESLSVCSSLRDAGDDALWEDSDERARLRRLRLLLRVVRAPDILGGSEGGGHSEEGAAGPWAPSLMHVTVIADVEDRVLGEEDRGAHGGAKRRSRRVKLQSQRPVGLEINGGERRLILQGERQKVRAGSLEAAVALRLGGQVEVQLIVPLAPRSDFSSTSISVPNTPALENIRYRECPVLAPLFHEAKEWCKGSQRADLDMPSAFRWTWGRRGCQPGTAADFYHWLAGLNLAIWEEGDVAFSPSIREEERPPHCSSPKAQSGDRCGGISTCLVLVISLEVKCDKM
Sbjct:    1 MKLVQALGQLSEKAGRKATSSRYSFDKPVVVMFPQVAAAYLARIAKPMDTSTLRVQLKAHQYGSPKEFLLDMDLIFANAIAFNDGAATPYEQEVVLVSNYLRRHLDRLALECLPLEEEYKPGERLNLSEQRRDENRQQMEEKASRQLATMAGGDVYGRFAYQEMRELIQQLKKERRVGEFFWEEVNRNENQGYYRVIARPICFRDILKSMDTETGVRVGQVVADIRLIYQNALQFNSGTETLVPISRVICEAARLLQRRLEEKLPLVYLRIAENVERQSELREKLKVLRAEDERQRHAELAALTTDQNAAGLAGGEALGPKGGLAGKGAGAVSPAAAGGPSLHFPSPGVDAPSPRFRSDMEQAAGHSQSGRVGGNPAVGDLPQTGSLLANKLRKEKRREAELDRKHEERRRKERESKLKERITQEVWARAQKAREKMFAAKEQSSALKQKGEEDEGGREGAMGGQQDTQNVSLGRDVSATADVRVEDNGGGAAFQPVDLSRLGTKPGRRHSGRVERQPVRSLLAELFPTVGHDEEAKSTSLGKELDTATGDDKQNGGGTITEDLFAQLNRVPAPEAAIRGDIDTSEKGEEEGAEDEESLSVCSSLRDAGDDALWEDSDERARLRRLRLLLRVVRAPDILGGSEGGGHSEEGAAGPWAPSLMHVTVIADVEDRVLGEEDRGAHGGAKRRSRRVKLQSQRPVGLEINGGERRLILQGERQKVRAGSLEAAVALRLGGQVEVQLIVPLAPRSDFSSTSISVPNTPALENIRYRECPVLAPLFHEAKEWCKGSQRADLDMPSAFRWTWGRRGCQPGTAADFYHWLAGLNLAIWEEGDVAFSPSIREEERPPHCSSPKAQSGDRCGGISTCLVLVISLEVKCDKM 880          
BLAST of EWM21839.1 vs. NCBI_GenBank
Match: gi|1210523899|dbj|GAX17223.1| (protein polybromo-1 [Fistulifera solaris])

HSP 1 Score: 98.2117 bits (243), Expect = 3.702e-17
Identity = 82/287 (28.57%), Postives = 146/287 (50.87%), Query Frame = 0
Query:   18 ATSSRYSFDKPVVVMFPQVAAAYLARIAKPMDTSTLRVQLKA-HQYGSPKEFLLDMDLIFANAIAFN-DG--AATPYEQEVVLVSNYLRRHLDRLALECL-------------PLEEEYKPGERLNLSEQRRDENRQQMEEKASRQ-LATMAGGDVYGRFAYQ--EMRELIQQLKKE---RRVGEFFWEEVNRNENQGYYRVIARPICFRDILKSMDTETGVRVGQVVADIRLIYQNALQFNS---GTETLVPISRVICEAARLLQRRLEEKLPLVYLRIAENVERQ 278
            A+  ++ F  PV ++FP +  +Y  +I KPMD +T+   L A ++Y +P++FL D+ L+F+NAI FN DG     P        S +L R+   ++LE L             P  +   P     L+E  R + RQ+MEE   ++ +     GD   R+ +Q  E  +L++ L+ +   +++G F    +       Y   IA+P+ +  + +++      +   V+AD+RLI+ NAL++NS   GT+T    S    E+A  + R+LE  +  + L +++ +ER+
Sbjct:  830 ASRPKFIFHVPVPILFPDLRESYSTKIRKPMDLTTVECTLLAGNKYATPEDFLQDVALVFSNAIRFNKDGRDIGDPLSCAYYDASVHLLRYSRWMSLELLQKYVDANSELVDEPTADSLPPFS-WKLTEGNRKKARQEMEELLMKEPIERSLEGD---RYTWQEAECEKLLKALRHQSDVKQMGYF----IKTFYPPDYKAFIAKPMDWDAVNRNLKKRHYTKFSDVIADLRLIFSNALRYNSRWKGTDT---DSGRAYESAVFMSRKLEMAINKMMLSVSDRLERE 1105          
BLAST of EWM21839.1 vs. NCBI_GenBank
Match: gi|1210522696|dbj|GAX18709.1| (hypothetical protein FisN_10Hh077 [Fistulifera solaris])

HSP 1 Score: 97.0561 bits (240), Expect = 9.680e-17
Identity = 88/311 (28.30%), Postives = 156/311 (50.16%), Query Frame = 0
Query:   18 ATSSRYSFDKPVVVMFPQVAAAYLARIAKPMDTSTLRVQLKA-HQYGSPKEFLLDMDLIFANAIAFN-DG--AATPYEQEVVLVSNYLRRHLDRLALECLPLEEEYKPGERL--------------NLSEQRRDENRQQMEEKASRQ-LATMAGGDVYGRFAYQ--EMRELIQQLKKE---RRVGEFFWEEVNRNENQGYYRVIARPICFRDILKSMDTETGVRVGQVVADIRLIYQNALQFNS---GTETLVPISRVICEAARLLQRRLEEKLPLVYLRIAENVERQ-----SELREKLKVLRAEDERQR 296
            A+  ++ F  PV ++FP +  +Y  +I KPMD +T+   L A ++Y +P++FL D+ L+F+NAI FN DG     P        S +L R+   ++LE   L++   P   L               L+E  R   RQ+MEE   ++ +     GD   R+ +Q  E  +L++ L+ +   +++G F    +       Y   IA+P+ +  + +++      +   V+AD+RLI+ NAL++N+   GT+T    S    E+A  + R+LE  +  + L +++ +ER+     +  RE     RAE+E+ R
Sbjct:  775 ASRPKFIFHVPVPILFPDLRESYSTKIRKPMDLTTVECTLLAGNKYAAPEDFLQDVALVFSNAIRFNKDGRDIGDPLSCAYYDASVHLLRYSRWMSLEL--LQKYVDPNSELVDEPTADGLPPFSWKLTEGNRKRARQEMEELLMKEPIERSLEGD---RYTWQEAECEKLLKALRHQSDVKQMGYF----IKTFYPPDYKAFIAKPMDWDAVNRNLKKRHYTKFNDVIADLRLIFSNALRYNARWKGTDT---DSGRAYESAVFMSRKLEMAINKMMLSVSDRLERERIDHSNAEREIAVAERAEEEKIR 1073          
BLAST of EWM21839.1 vs. NCBI_GenBank
Match: gi|397569218|gb|EJK46606.1| (hypothetical protein THAOC_34720 [Thalassiosira oceanica])

HSP 1 Score: 83.1889 bits (204), Expect = 1.617e-12
Identity = 80/315 (25.40%), Postives = 149/315 (47.30%), Query Frame = 0
Query:    4 VQALGQLSEKAGRKATSSRYSFDKPVVVMFPQVAAAYLARIAKPMDTSTLRVQLKAHQYGSPKEFLLDMDLIFANAIAFN-------DGAATPYEQEVVLVSNYLRRHLDRLALECL-PLEEEYK--------PGERLNLSEQRRDENRQQMEEKASRQLATMA-GGDVYGRFAYQEMRELIQQLKK--ERRVGEFFWEEVNRNENQGYYRVIARPICF---RDILKSMDTETGVRVGQVVADIRLIYQNALQFNSGTETLVPISRVICEAARLLQRRLEEKLPLVYLRIAENVERQSELREKLKVLRAEDERQR 296
            ++   QL +     A   +Y F  PV ++FP++  +Y  +I  PMD +T   +L    Y + +EF+ D+ L+FANAI FN       +G +  Y +     S +L ++   ++LE L P   +                L+++ R   R++ME     +L      GD Y  +   E   L++ ++   + +  ++F E  +   +   Y  I++PI +    D LK     T   +G+VV D+RLI+ NAL++N G   +   S+   ++A+ + ++LE  +  + L + + + R  E  + + V R  + +QR
Sbjct:  692 LKFFKQLMKHPWVSAERPKYIFHVPVPILFPEIRVSYAEKIKNPMDLTTAESKLLQGVYENAEEFVRDIALVFANAIEFNKEGHDLGEGMSCAYYE----ASTHLLKYSRWISLEILQPFLSKSSSSVVVESGAAASWKLTQRNRMFARKEMESIVFGELIDRTEPGDRYS-WTETECERLMKSIRHMSDMKHMQYFLEMSSLPADYTAY--ISKPIAWGLCNDKLKERRYAT---IGEVVDDLRLIFANALKYNEGPRHVNVTSQSAYDSAKYMSQKLEAAIDKMLLSVGDRIGR--ERVDMMTVRRDMEAKQR 994          
BLAST of EWM21839.1 vs. NCBI_GenBank
Match: gi|813167765|ref|XP_012203876.1| (hypothetical protein SPRG_09393 [Saprolegnia parasitica CBS 223.65] >gi|641531374|gb|KDO25450.1| hypothetical protein SPRG_09393 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 79.337 bits (194), Expect = 2.684e-11
Identity = 60/216 (27.78%), Postives = 107/216 (49.54%), Query Frame = 0
Query:   25 FDKPVVVMFPQVAAAYLARIAKPMDTSTLRVQLKAHQYGSPKEFLLDMDLIFANAIAFNDGAATPYEQEVVLVSNYLRRHLDRLALECLPLEEEYKPGER----LNLSEQRRDENRQQMEEKASRQLATMAGGDVYGRFAYQEMRELIQQLKKERRVGEFFWEEVNRNENQGYYRVIARPICFRDILKSMDTETGVRVGQVVADIRLIYQNALQFN 236
            FD P++ +FP +AA+Y   +A+PMD  T+R +L AHQ  S  EF+    L+FANA AFN G+ +     V  ++ +LR   D + +E   L+ + +   R    L +   R  E++   E   S+ L  +     Y ++A+  +  +               E++       Y+ +I +P+  + + + + + T    G+ +ADIRL ++NAL +N
Sbjct:  768 FDVPLLSIFPDLAASYERVVAEPMDLGTMRQRLLAHQLPSAAEFVRLGHLVFANAEAFNVGSDSS-SIRVREMAAHLRWFFDSMCIEHKLLDADVRLERRNERFLGVQTLRFTESKPNKE--CSKVLRVLLSQK-YQKYAWPFVEPV---------------EKLFPGLPPKYFEIITKPMDLKTVSEKLSSLTYKTYGEFIADIRLTFENALLYN 964          
BLAST of EWM21839.1 vs. NCBI_GenBank
Match: gi|669153356|ref|XP_008612240.1| (hypothetical protein SDRG_08149 [Saprolegnia diclina VS20] >gi|530736136|gb|EQC34378.1| hypothetical protein SDRG_08149 [Saprolegnia diclina VS20])

HSP 1 Score: 78.5666 bits (192), Expect = 4.581e-11
Identity = 62/224 (27.68%), Postives = 108/224 (48.21%), Query Frame = 0
Query:   25 FDKPVVVMFPQVAAAYLARIAKPMDTSTLRVQLKAHQYGSPKEFLLDMDLIFANAIAFNDGAATPYEQEVVLVSNYLRRHLDRLALECLPLEEEYKPGERLNLSEQRRDE------NRQQMEEKASRQLATMAGGDVYGRFAYQEMRELIQQLKKERRVGEFFWEEVNRNEN------QGYYRVIARPICFRDILKSMDTETGVRVGQVVADIRLIYQNALQFN 236
            FD P++ +FP +AA+Y   + +PMD  T+R +L AHQ  S  EF+    L+FANA AFN G+ +     V  ++ +LR   D + +E   L+ E        L  +RR+E        +  E K +++ + +             +R L+ Q     +  ++ W  V   E         Y+ +I +P+  + + + + + T    G+ +ADIRL ++NAL +N
Sbjct:  761 FDVPLLRIFPDLAASYERVVTEPMDLGTMRQRLLAHQLPSAAEFVRLGHLVFANAEAFNVGSDSS-SIRVREMAAHLRWFFDSMCMEHKLLDAE--------LRLERRNERFLGVQTLRFTESKPNKECSKV-------------LRVLLSQ-----KYQKYAWPFVEPVEKLFPGLPPKYFEIITKPMDLKTVSEKLTSLTYKTYGEFIADIRLTFENALLYN 957          
BLAST of EWM21839.1 vs. NCBI_GenBank
Match: gi|635370923|emb|CCI41000.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 76.6406 bits (187), Expect = 1.523e-10
Identity = 77/284 (27.11%), Postives = 133/284 (46.83%), Query Frame = 0
Query:   21 SRYSFDKPVVVMFPQVAAAYLARIAKPMDTSTLRVQLKAHQYGSPKEFLLDMDLIFANAIAFNDGAATPYEQEVVLVSNYLRRHLDRLALECLPLEEEYKPGE--RLNLSEQRRDENRQQMEEKASRQLATMAGGDVYGRFAYQEMRELIQQLKKERRVGEFFWEEVNRNENQGYYRVIARPICFRDILKSMDTETGVRVGQVVADIRLIYQNALQFNSGTETLVPISRVICEAARLLQRRLEEKLPLVYLRIAENVERQSELR-EKLKVLRAE-DERQRHAEL 300
            S+  FD+P++ +FPQ+   YL  I +PMD +TLR QL++H   +P EF+    LIF NAI FN         +  L    + +HL     + L  E+    GE  R+ L ++R D  +    E  +R+   +  G    +  YQ+     Q+  K      F   E +      Y+ +I  P+    I   +++      G  + D+RL ++NA+ +N   +     S  +  AA  + + +++    V L +AE + R+  LR E+ +++ A+  E QR  E+
Sbjct:  882 SKLHFDQPLLKIFPQLTTEYLKMIGEPMDIATLRSQLQSHAISAPAEFVRKGSLIFQNAIDFNSAG-----DDASLHVREMSQHL-LWYFQSLCTEQTLISGEEARVELRKERADVIQNIALEIKARECQKLLRGLQSQK--YQKNSWPFQKPVK----ALFPLLEAD------YFELIKTPMDLATIQDKLNSFEYSTYGDFIRDVRLTFENAILYNRADKGREGWS--VYGAAVSMLKVIDDLWGTVTLEVAEKLRRREVLRKERERIMEAKRREEQRLKEI 1145          
BLAST of EWM21839.1 vs. NCBI_GenBank
Match: gi|1173953908|gb|OQS01417.1| (hypothetical protein ACHHYP_01063 [Achlya hypogyna])

HSP 1 Score: 76.2554 bits (186), Expect = 2.163e-10
Identity = 63/221 (28.51%), Postives = 106/221 (47.96%), Query Frame = 0
Query:   25 FDKPVVVMFPQVAAAYLARIAKPMDTSTLRVQLKAHQYGSPKEFLLDMDLIFANAIAFNDGAATPYEQEVVLVSNYLRRHLDRLALECLPLEEEYKPGERLNLSEQRRDENRQQMEEKASRQLATMAGGDVYGRFA-YQEMRELIQQLKK--ERRVGEFFW------EEVNRNENQGYYRVIARPICFRDILKSMDTETGVRVGQVVADIRLIYQNALQFN 236
            FD P++ +FP +A +Y   +++PMD  T+R QL AH   S +EF+     +FANA  FN G  +     V  ++ +LR   D + +E            RL LS + R E RQ+      R LA         RF   +  RE ++ L+    ++  ++ W      E++  N    Y+ +I +P+  + I   ++       G+ +AD+RL ++NAL +N
Sbjct:  739 FDVPLLSIFPDLAVSYKRVVSEPMDLGTMRAQLLAHSIPSAEEFVRLGHTVFANAERFNVGTDSS-SVRVREMAAHLRWFFDSMCIE-----------HRL-LSPELRQERRQE------RFLAVQT-----LRFTESKPNRECVKVLRVLLSQKYQKYCWPFLEPVEKLFPNLPPKYFEIITKPMDLKTISDKLNGLQYKTYGEFIADVRLTFENALVYN 935          
BLAST of EWM21839.1 vs. NCBI_GenBank
Match: gi|953499044|emb|CEG39356.1| (Transcription initiation factor TFIID, subunit BDF1 and related bromodomain proteins [Plasmopara halstedii])

HSP 1 Score: 73.1738 bits (178), Expect = 1.061e-9
Identity = 62/240 (25.83%), Postives = 111/240 (46.25%), Query Frame = 0
Query:    6 ALGQLSEKAGRKATSSRYSFDKPVVVMFPQVAAAYLARIAKPMDTSTLRVQLKAHQYGSPKEFLLDMDLIFANAIAFN---DGAATPYEQEVVLVSNYLRRHLDRLALECLPLEEEYKPGERLNLSEQRRDENRQQMEEKASRQLATMAGGDVYGRFAYQEMRELIQQLKKERRVGEF------FWEEVNRNENQGYYRVIARPICFRDILKSMDTETGVRVGQVVADIRLIYQNALQFN 236
            A  ++  + G+    S+  F+ P++ +FPQ+A  Y + IA+PMD  TLR QL AH   +  +FL +  LIF NA+ FN   D A+T    +V  +S +L  + D L  E L        GE+   S  +RD+ R++  E  S     +   +       Q++  ++   K ++    F       +  +  +    Y+ ++  P+    I + +        G  + D+RL ++NA+ +N
Sbjct:   50 ACDRVLNRLGKIEQVSKLHFNHPLLEVFPQLATEYKSLIAEPMDLRTLREQLHAHAL-TQADFLYNGRLIFQNAMRFNCADDSAST----QVREMSAHLLWYFDSLCAEMLITSGPEVTGEQ---SRAKRDQLRRERAEFVSTVPVELKAKEC------QKLLRVLNSQKHDKNCWPFRKPVRVLFPALTSD----YFDIVKTPMDLSTIAEKLTAFEYKMHGDFIRDVRLTFENAMVYN 271          
BLAST of EWM21839.1 vs. NCBI_GenBank
Match: gi|939629805|ref|XP_014275890.1| (PREDICTED: protein polybromo-1 isoform X3 [Halyomorpha halys])

HSP 1 Score: 72.0182 bits (175), Expect = 4.716e-9
Identity = 63/251 (25.10%), Postives = 115/251 (45.82%), Query Frame = 0
Query:   25 FDKPVVVMFPQVAAAYLARIAKPMDTSTLRVQLKAHQYGSPKEFLLDMDLIFANAIAFNDGAATPYEQEVVLVSNYLRRHLDRLALECLPLEEEYKPGERLNLSEQRRD-ENRQQMEEKASRQLATMAGGDV---YGRFAYQEMRELIQQLK-----KERRVGEFFWEEVNRNENQGYYRVIARPICFRDILKSMDTETGVRVGQVVADIRLIYQNALQFNSGTETLVPISRVICEAARLLQRRLEEKLPL 266
             +KP   ++P+    Y   I KP+D  T+   ++A +Y S +E L D  L+F N   FN+  +  YE  + L    LR  +  L     PL +  KP E+  L E +   E+R+  +  +   ++T     V          +MR L   ++     K R++ + F +  ++ E   YY VI +PI    I + + + +   +  + +D+ L++ NA ++N       P S++  +A  L +  ++ KL L
Sbjct:  543 MEKPSKKLYPE----YYKVIDKPIDMLTIEANIRAEKYQSEEEILSDFKLMFQNCRKFNEEGSMIYEDAIKL-EKILRDKVKELG----PLNDS-KPTEKKVLREHKEHREHREPRDRDSKSSISTPKPKKVNKSVDSVTLHKMRTLFNTIRDFKDQKGRQLSQIFIKLPSKVEYPDYYEVIKKPINLEQISQKLKSSSYDGLDDLCSDLILMFDNACKYNE------PDSQIYKDALTLQKVVMQTKLQL 777          
The following BLAST results are available for this feature:
BLAST of EWM21839.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102181|gb|EWM21839.1|0.000e+0100.00protein polybromo-1 [Nannochloropsis gaditana][more]
gi|1210523899|dbj|GAX17223.1|3.702e-1728.57protein polybromo-1 [Fistulifera solaris][more]
gi|1210522696|dbj|GAX18709.1|9.680e-1728.30hypothetical protein FisN_10Hh077 [Fistulifera sol... [more]
gi|397569218|gb|EJK46606.1|1.617e-1225.40hypothetical protein THAOC_34720 [Thalassiosira oc... [more]
gi|813167765|ref|XP_012203876.1|2.684e-1127.78hypothetical protein SPRG_09393 [Saprolegnia paras... [more]
gi|669153356|ref|XP_008612240.1|4.581e-1127.68hypothetical protein SDRG_08149 [Saprolegnia dicli... [more]
gi|635370923|emb|CCI41000.1|1.523e-1027.11unnamed protein product [Albugo candida][more]
gi|1173953908|gb|OQS01417.1|2.163e-1028.51hypothetical protein ACHHYP_01063 [Achlya hypogyna... [more]
gi|953499044|emb|CEG39356.1|1.061e-925.83Transcription initiation factor TFIID, subunit BDF... [more]
gi|939629805|ref|XP_014275890.1|4.716e-925.10PREDICTED: protein polybromo-1 isoform X3 [Halyomo... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8851rna8851Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications