EWM29850.1, cds882 (CDS) Nannochloropsis gaditana

Overview
NameEWM29850.1
Unique Namecds882
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:636457..638328 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29850.1
Productmethionyl-trna synthetase
Orig transcript idgnl|cribi|Naga_100017g76.348.mrna
GeneMetRS
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:636457..638328 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
GO:0006418tRNA aminoacylation for protein translation
GO:0006431methionyl-tRNA aminoacylation
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004812aminoacyl-tRNA ligase activity
GO:0000166nucleotide binding
GO:0005524ATP binding
GO:0004825methionine-tRNA ligase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR023457Met-tRNA_synth_2
IPR015413Methionyl/Leucyl_tRNA_Synth
IPR014729Rossmann-like_a/b/a_fold
IPR009080tRNAsynth_1a_anticodon-bd
IPR014758Met-tRNA_synth
Homology
BLAST of EWM29850.1 vs. NCBI_GenBank
Match: gi|585112431|gb|EWM29850.1| (methionyl-trna synthetase [Nannochloropsis gaditana])

HSP 1 Score: 1285.01 bits (3324), Expect = 0.000e+0
Identity = 623/623 (100.00%), Postives = 623/623 (100.00%), Query Frame = 0
Query:    1 MHVRRRQQLGYPTSFWSFPSFFRVIVVVMYASSTSALRRKSAAFVFPGARGYIPRLRSHSSLLFNERRFFSTSVSAAATVKDSPGSNSKKTGYYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGRDVFFLTGTDEHGQKVEQSAAKAGKSPQTFVDEVSQNFRSLAKIMEFTNDKFIRTTQADHKAAVQALWKQLEAAGHIYLGAYEGWYSVRDEAYYTESELVDGKAPTGAEVVWVVKEPSYFFKLSAWQEPLLEFYAAHPNFIAPESRRNEVISFVKGGLKDLSISRTTFKWGVPVPEDDDHVMYVWMDALTNYISALGYPEAKGSSPTPYQRFWPADLHVVGKDILRFHAVYWPAFLMAAGLAPPRRIFAHGWWTKDRQKISKSLGNVIDPVRLVEQFGLDPTRYFLMSEVPFGNDGDFSNDAFVRRVNNQLANELGNLFQRSLAFIAKNCEGQVPEPTSALTEADVAMLRSARGLLETVRPLVRDEQALHRYSEALNRVVNEGNRYFDEQAPWTLRKTDKDRMATVLYVTVEALRSVALLYQPLIPASASKLLDLLAVPSERRTFADVGADAALTPGTPLPKPEGVFPRVEDPDAPKDGAASPAKQKQHKKTKAP 623
            MHVRRRQQLGYPTSFWSFPSFFRVIVVVMYASSTSALRRKSAAFVFPGARGYIPRLRSHSSLLFNERRFFSTSVSAAATVKDSPGSNSKKTGYYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGRDVFFLTGTDEHGQKVEQSAAKAGKSPQTFVDEVSQNFRSLAKIMEFTNDKFIRTTQADHKAAVQALWKQLEAAGHIYLGAYEGWYSVRDEAYYTESELVDGKAPTGAEVVWVVKEPSYFFKLSAWQEPLLEFYAAHPNFIAPESRRNEVISFVKGGLKDLSISRTTFKWGVPVPEDDDHVMYVWMDALTNYISALGYPEAKGSSPTPYQRFWPADLHVVGKDILRFHAVYWPAFLMAAGLAPPRRIFAHGWWTKDRQKISKSLGNVIDPVRLVEQFGLDPTRYFLMSEVPFGNDGDFSNDAFVRRVNNQLANELGNLFQRSLAFIAKNCEGQVPEPTSALTEADVAMLRSARGLLETVRPLVRDEQALHRYSEALNRVVNEGNRYFDEQAPWTLRKTDKDRMATVLYVTVEALRSVALLYQPLIPASASKLLDLLAVPSERRTFADVGADAALTPGTPLPKPEGVFPRVEDPDAPKDGAASPAKQKQHKKTKAP
Sbjct:    1 MHVRRRQQLGYPTSFWSFPSFFRVIVVVMYASSTSALRRKSAAFVFPGARGYIPRLRSHSSLLFNERRFFSTSVSAAATVKDSPGSNSKKTGYYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGRDVFFLTGTDEHGQKVEQSAAKAGKSPQTFVDEVSQNFRSLAKIMEFTNDKFIRTTQADHKAAVQALWKQLEAAGHIYLGAYEGWYSVRDEAYYTESELVDGKAPTGAEVVWVVKEPSYFFKLSAWQEPLLEFYAAHPNFIAPESRRNEVISFVKGGLKDLSISRTTFKWGVPVPEDDDHVMYVWMDALTNYISALGYPEAKGSSPTPYQRFWPADLHVVGKDILRFHAVYWPAFLMAAGLAPPRRIFAHGWWTKDRQKISKSLGNVIDPVRLVEQFGLDPTRYFLMSEVPFGNDGDFSNDAFVRRVNNQLANELGNLFQRSLAFIAKNCEGQVPEPTSALTEADVAMLRSARGLLETVRPLVRDEQALHRYSEALNRVVNEGNRYFDEQAPWTLRKTDKDRMATVLYVTVEALRSVALLYQPLIPASASKLLDLLAVPSERRTFADVGADAALTPGTPLPKPEGVFPRVEDPDAPKDGAASPAKQKQHKKTKAP 623          
BLAST of EWM29850.1 vs. NCBI_GenBank
Match: gi|497225730|ref|WP_009539992.1| (methionine--tRNA ligase [Caenispirillum salinarum] >gi|425882832|gb|EKV31511.1| Methionyl-tRNA synthetase [Caenispirillum salinarum AK4])

HSP 1 Score: 712.605 bits (1838), Expect = 0.000e+0
Identity = 344/521 (66.03%), Postives = 412/521 (79.08%), Query Frame = 0
Query:   87 NSKKTGYYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGRDVFFLTGTDEHGQKVEQSAAKAGKSPQTFVDEVSQNFRSLAKIMEFTNDKFIRTTQADHKAAVQALWKQLEAAGHIYLGAYEGWYSVRDEAYYTESELVDG-----KAPTGAEVVWVVKEPSYFFKLSAWQEPLLEFYAAHPNFIAPESRRNEVISFVKGGLKDLSISRTTFKWGVPVPEDDDHVMYVWMDALTNYISALGYPEAKGSSPTPYQRFWPADLHVVGKDILRFHAVYWPAFLMAAGLAPPRRIFAHGWWTKDRQKISKSLGNVIDPVRLVEQFGLDPTRYFLMSEVPFGNDGDFSNDAFVRRVNNQLANELGNLFQRSLAFIAKNCEGQVPEPTSALTEADVAMLRSARGLLETVRPLVRDEQALHRYSEALNRVVNEGNRYFDEQAPWTLRKTDKDRMATVLYVTVEALRSVALLYQPLIPASASKLLDLLAVPSERRTFADVGADAALTPGTPLPKPEGVFPRVEDPD 602
            + + T YY+TTPIYYVNDKPHIGHAYTTLACDV+ARF RLDG DV FLTGTDEHGQKVE+SAA  G  PQTF D+VSQNFR LA  M F+ND FIRTT+  HKAA QALWK+L     IYL AY+GWY+VRDEA+Y E ELVDG      APTGA V W V+EPSYFF+LSAW + L++FY  +P+FIAPESRRNEV+SFV+GGL+DLSISRTTFKWGVPVP DD H+MYVW+DALTNYI+A+G+PE  G     + +FWPADLH+VGKDILRFHAV+WPAFLMAAG+ PP+R+FAHGWWT + +KISKS+GNVIDP+ L+E +GLD  RYFLM EVPFGNDGDFS+ A V R+N +LAN+LGNL QR L+  AKNC+G+VPE   A T  D  +L +A GLL  VRPL+ D QA H   E +  VV   N Y D QAPW LRK+D  RMATVLYV +EA+R+VA+L QP++P SA+K+LD L++P + RTFA +G   ALT GTP+PKP+GVFPR  +P+
Sbjct:    2 SGQTTPYYITTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGFDVKFLTGTDEHGQKVEKSAAAKGIDPQTFTDQVSQNFRDLATAMNFSNDDFIRTTEDRHKAACQALWKRLVEKDMIYLDAYKGWYAVRDEAFYAEDELVDGPDGQKMAPTGAPVEW-VEEPSYFFRLSAWGDKLMQFYQDNPDFIAPESRRNEVMSFVRGGLQDLSISRTTFKWGVPVPGDDAHIMYVWLDALTNYITAVGWPEEGGE----FDKFWPADLHMVGKDILRFHAVFWPAFLMAAGITPPKRVFAHGWWTNEGKKISKSVGNVIDPLELIETYGLDQVRYFLMREVPFGNDGDFSHRAMVGRMNGELANDLGNLSQRVLSMTAKNCKGEVPE-VGAFTPEDRELLDAAYGLLGKVRPLM-DRQAFHEALETIWVVVRAANAYVDRQAPWVLRKSDPARMATVLYVLMEAVRNVAILMQPVVPESAAKMLDQLSIPDDARTFAALGEGGALTAGTPIPKPQGVFPRYVEPE 515          
BLAST of EWM29850.1 vs. NCBI_GenBank
Match: gi|299471948|emb|CBN79628.1| (Methionyl-tRNA synthetase [Ectocarpus siliculosus])

HSP 1 Score: 711.449 bits (1835), Expect = 0.000e+0
Identity = 348/535 (65.05%), Postives = 399/535 (74.58%), Query Frame = 0
Query:   93 YYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGRDVFFLTGTDEHGQKVEQSAAKAGKSPQTFVDEVSQNFRSLAKIMEFTNDKFIRTTQADHKAAVQALWKQLEAAGHIYLGAYEGWYSVRDEAYYTESELVDGKAPTGAEVVWVVKEPSYFFKLSAWQEPLLEFYAAHPNFIAPESRRNEVISFVKGGLKDLSISRTTFKWGVPVPEDDDHVMYVWMDALTNYISALGYPEAKGSSPTPYQRFWPADLHVVGKDILRFHAVYWPAFLMAAGLAPPRRIFAHGWWTKDRQKISKSLGNVIDPVRLVEQFGLDPTRYFLMSEVPFGNDGDFSNDAFVRRVNNQLANELGNLFQRSLAFIAKNCEGQVPEPTSA--------------------LTEADVAMLRSARGLLETVRPLVRDEQALHRYSEALNRVVNEGNRYFDEQAPWTLRKTDKDRMATVLYVTVEALRSVALLYQPLIPASASKLLDLLAVP-SERRTFADV----GADAALTPGTPLPKPEGVFPRVEDPD 602
            YYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGR+V FLTGTDEHGQKVE SA KA KSPQ F DEVSQ FR L K M F+ND+FIRTT   HK A  ALW +L+  G I LG Y GWYSVRDEA+Y E+ELVDGKAP+GAEV WV KEPSYFFKLS WQ+PLL+FYA +P FIAPESRRNE +SFV GGL+DLSISRT+F WGVPVP DD+HVMYVW+DAL NYISALG+PE        + +FWPADLHV+GKDILRFH+VYWPA L+AAGL PP+R+F HGWWTKD QKISKS GNVIDP+ LV ++G+D TRYFLMSEVPFGNDGDFS  AF  RVN+ LANE+GNL  R+L+   KNC GQVP P +A                    LT  D  +L+SA   L  VRPLV + Q LH+  EA+  V  + NRY D QAPW L+KTD DRM TVL+V +E +R V +LYQP +P +A KLLD L VP  + R FA +    G   +L PG PL KP  VFPR+E P+
Sbjct:   76 YYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKVEASALKADKSPQQFCDEVSQEFRDLLKTMNFSNDRFIRTTDTSHKVAASALWNRLQERGQISLGVYAGWYSVRDEAFYGEAELVDGKAPSGAEVEWVEKEPSYFFKLSEWQQPLLDFYAENPQFIAPESRRNEAVSFVSGGLRDLSISRTSFSWGVPVPGDDEHVMYVWVDALANYISALGFPEM--GEAGEFSKFWPADLHVIGKDILRFHSVYWPALLLAAGLEPPKRLFVHGWWTKDGQKISKSTGNVIDPLDLVARYGVDATRYFLMSEVPFGNDGDFSETAFQNRVNSNLANEVGNLAMRTLSMAVKNCGGQVPRPAAAADAGDVDEGGDKALGREDFDLTPEDKELLKSAGECLGVVRPLVGETQQLHKALEAILLVSRDANRYVDFQAPWKLKKTDPDRMKTVLWVLLETIRHVGILYQPFVPEAAGKLLDQLGVPEGDARLFAALDQGGGGRFSLQPGVPLDKPVPVFPRIEVPE 608          
BLAST of EWM29850.1 vs. NCBI_GenBank
Match: gi|1057125335|ref|WP_068519211.1| (methionine--tRNA ligase [Thalassospira sp. MCCC 1A02491] >gi|1016011773|gb|KZB60808.1| methionine--tRNA ligase [Thalassospira sp. MCCC 1A02491])

HSP 1 Score: 708.368 bits (1827), Expect = 0.000e+0
Identity = 341/521 (65.45%), Postives = 411/521 (78.89%), Query Frame = 0
Query:   90 KTGYYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGRDVFFLTGTDEHGQKVEQSAAKAGKSPQTFVDEVSQNFRSLAKIMEFTNDKFIRTTQADHKAAVQALWKQLEAAGHIYLGAYEGWYSVRDEAYYTESELV--DGK--APTGAEVVWVVKEPSYFFKLSAWQEPLLEFYAAHPNFIAPESRRNEVISFVKGGLKDLSISRTTFKWGVPVPEDDDHVMYVWMDALTNYISALGYPEAKGSSPTPYQRFWPADLHVVGKDILRFHAVYWPAFLMAAGLAPPRRIFAHGWWTKDRQKISKSLGNVIDPVRLVEQFGLDPTRYFLMSEVPFGNDGDFSNDAFVRRVNNQLANELGNLFQRSLAFIAKNCEGQVPEPTSALTEADVAMLRSARGLLETVRPLVRDEQALHRYSEALNRVVNEGNRYFDEQAPWTLRKTDKDRMATVLYVTVEALRSVALLYQPLIPASASKLLDLLAVPSERRTFADVGADAALTPGTPLPKPEGVFPR-VEDPDAPK 605
            K  YY+TTPIYYVNDKPHIGHAYTTLACDV+ARF RLDG DV FLTGTDEHGQKV++SAA  G  PQTF D+VSQNFR LA  M ++ND FIRTT+  HK A QALW  L   G IYLG+Y+GWYSVRDEA+Y E EL+  DG+  APTGA V W V EPSYFFKLSAW + LLEFY  +P+FIAP+SRRNEVISFVKGG+ DLS+SRT+FKWGVPVP D+DHVMYVW+DALTNY++A+GYP+A    P   +++WPADLH+VGKDILRFHAVYWPAFL+AAG+ PP+R+FAHGWWT + QKISKS+GNVIDP  L E++GLD TRYFLM EVPFGNDGDF++ A V R+N++LAN+LGN+ QR L+ I KNC   +P P  ALT+AD  +L  A G+L+TVRPL  DEQA ++  EA+  +V + NRY DE APW L+KTD  RM TVLYV  E +R V +L QP++P SASK+LDLL +  ++R F ++G D AL PGT +PKP GVFPR VE+ +  K
Sbjct:    5 KQPYYITTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGYDVMFLTGTDEHGQKVDKSAAAKGIDPQTFTDQVSQNFRDLAVHMNYSNDDFIRTTEERHKKACQALWNTLLEKGEIYLGSYDGWYSVRDEAFYAEKELITKDGEKLAPTGAPVEW-VSEPSYFFKLSAWGDRLLEFYEQNPDFIAPQSRRNEVISFVKGGMHDLSVSRTSFKWGVPVPGDEDHVMYVWLDALTNYLTAIGYPDA---DPAKLEKYWPADLHMVGKDILRFHAVYWPAFLLAAGITPPKRVFAHGWWTNEGQKISKSIGNVIDPYDLTEKYGLDQTRYFLMREVPFGNDGDFAHRAMVNRMNSELANDLGNMCQRVLSMIHKNCNAAIPTP-GALTDADNEILGKAHGMLDTVRPLF-DEQAFNKGLEAIWSLVGDANRYVDEMAPWGLKKTDPARMETVLYVLAEVIRHVGILVQPIMPDSASKILDLLVLADDQRGFENLGPDHALVPGTEIPKPAGVFPRYVEEDEGEK 519          
BLAST of EWM29850.1 vs. NCBI_GenBank
Match: gi|1210516514|dbj|GAX24564.1| (methionyl-tRNA synthetase [Fistulifera solaris])

HSP 1 Score: 707.212 bits (1824), Expect = 0.000e+0
Identity = 341/544 (62.68%), Postives = 411/544 (75.55%), Query Frame = 0
Query:   58 SHSSLLFNERRFFSTSVSAAATVKDSPGSNSKKTGYYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGRDVFFLTGTDEHGQKVEQSAAKAGKSPQTFVDEVSQNFRSLAKIMEFTNDKFIRTTQADHKAAVQALWKQLEAAGHIYLGAYEGWYSVRDEAYYTESELVDGKAPTGAEVVWVVKEPSYFFKLSAWQEPLLEFYAAHPNFIAPESRRNEVISFVKGGLKDLSISRTTFKWGVPVPEDDDHVMYVWMDALTNYISALGYPEAKGSSPTPYQRFWPADLHVVGKDILRFHAVYWPAFLMAAGLAPPRRIFAHGWWTKDRQKISKSLGNVIDPVRLVEQFGLDPTRYFLMSEVPFGNDGDFSNDAFVRRVNNQLANELGNLFQRSLAFIAKNCEGQVPEPTSALTEADVAMLRSARGLLETVRPLVRDEQALHRYSEALNRVVNEGNRYFDEQAPWTLRKTDKDRMATVLYVTVEALRSVALLYQPLIPASASKLLDLLAVPSERRTFADVGADAALTPGTPLPKPEGVFPRVEDP 601
            SH  LL    R +S+  + A +  D       K  + +TTPIYYVNDKPHIGHAYT++ACDVIARFMRL GR+VFFL+GTDEHGQKVEQ+A   G  PQ FVD VS NFR L +++  +ND FIRTT+  HK AV  L+ ++   G+IYL  YEGWYSVRDE +YTESELVDGKAPTGAEV WV KE SYFFKLSA+QE LLEFY  +P FIAPESRRNEV+SFVK GLKDLS+SRT+FKWG+P+ +D +H+ YVW+DALTNYISALGYPE  G     Y+ FWPA LHVVGKDILRFHA+YWPAFLMAA L  P+R+FAHGWWTKD QKISKSLGNVIDPV LV ++G+D TR+FLM+EV FGNDGDFS+ A + +VN  LANELGNL QR+L+ + KNC+  VP      TEAD A+L SAR L       +   QA+H+Y E + R+V E N+Y DE  PW+L+KTD DRMATVLYV +E LR V +LYQPLIP +A+K+LD L+VP E RTF+ +     +  G+ +PKPEG+FPR+E P
Sbjct:   19 SHRLLLPKWTRLYSSLGTTATSFDDG------KRPFQITTPIYYVNDKPHIGHAYTSIACDVIARFMRLSGREVFFLSGTDEHGQKVEQTAKSKGMEPQEFVDSVSVNFRDLLELLNISNDSFIRTTEDHHKRAVLELFDKMVENGYIYLDNYEGWYSVRDECFYTESELVDGKAPTGAEVEWVAKEESYFFKLSAFQEKLLEFYEQNPGFIAPESRRNEVVSFVKRGLKDLSVSRTSFKWGIPMKQDPNHIFYVWVDALTNYISALGYPETGGK----YETFWPAALHVVGKDILRFHAIYWPAFLMAADLPLPKRLFAHGWWTKDGQKISKSLGNVIDPVDLVNKYGVDQTRFFLMAEVSFGNDGDFSDKAMITKVNTNLANELGNLCQRTLSMVFKNCDKAVPTTVDPFTEADNAVLASARELRGKAAAEIA-VQAIHKYVELMVRMVWETNKYIDEMEPWSLKKTDPDRMATVLYVIMEVLRHVGILYQPLIPEAANKILDALSVPKEERTFSHLDDAYRIKEGSAIPKPEGIFPRIEMP 551          
BLAST of EWM29850.1 vs. NCBI_GenBank
Match: gi|1098560142|ref|WP_071240210.1| (methionine--tRNA ligase [Thalassospira sp. MIT1004] >gi|1095598395|gb|OHZ01110.1| methionine--tRNA ligase [Thalassospira sp. MIT1004])

HSP 1 Score: 706.827 bits (1823), Expect = 0.000e+0
Identity = 343/516 (66.47%), Postives = 407/516 (78.88%), Query Frame = 0
Query:   90 KTGYYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGRDVFFLTGTDEHGQKVEQSAAKAGKSPQTFVDEVSQNFRSLAKIMEFTNDKFIRTTQADHKAAVQALWKQLEAAGHIYLGAYEGWYSVRDEAYYTESELV--DGK--APTGAEVVWVVKEPSYFFKLSAWQEPLLEFYAAHPNFIAPESRRNEVISFVKGGLKDLSISRTTFKWGVPVPEDDDHVMYVWMDALTNYISALGYPEAKGSSPTPYQRFWPADLHVVGKDILRFHAVYWPAFLMAAGLAPPRRIFAHGWWTKDRQKISKSLGNVIDPVRLVEQFGLDPTRYFLMSEVPFGNDGDFSNDAFVRRVNNQLANELGNLFQRSLAFIAKNCEGQVPEPTSALTEADVAMLRSARGLLETVRPLVRDEQALHRYSEALNRVVNEGNRYFDEQAPWTLRKTDKDRMATVLYVTVEALRSVALLYQPLIPASASKLLDLLAVPSERRTFADVGADAALTPGTPLPKPEGVFPR-VED 600
            K  YY+TTPIYYVNDKPHIGHAYTTLACDV+ARF RLDG DV FLTGTDEHGQKV++SAA  G  PQTF D+VSQNFR LA  M ++ND FIRTT+  HK A QALW  L   G IYLG+Y+GWYSVRDEA+Y E EL+  DG+  APTGA V W V EPSYFFKLSAW + LL+FY  +P+FIAP+SRRNEVISFVKGG+ DLS+SRT+FKWGVPVP D+DHVMYVW+DALTNY++A+GYP+A    P    +FWPADLH+VGKDILRFHAVYWPAFL+AAG+ PP+R+FAHGWWT + QKISKSLGNVIDP  L +++GLD TRYFL+ EVPFGNDGDFS+ + V R+N++LAN+LGN+ QR L+ I KNC   VP      TEAD+A+L  A G+L+TVRPL  D QA H+  EA+  +V + NRY DE APW L+KTD  RM TVLYV  E +R V +L QPL+PASA+K+LD L +P ++R F  +GAD AL  GT LPKPEGVFPR VED
Sbjct:    5 KQPYYITTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGYDVMFLTGTDEHGQKVDKSAAAKGIDPQTFTDQVSQNFRDLAVHMNYSNDDFIRTTEERHKKACQALWNTLLEKGEIYLGSYDGWYSVRDEAFYGEKELIEKDGEKVAPTGAPVEW-VSEPSYFFKLSAWGDRLLKFYDDNPDFIAPQSRRNEVISFVKGGMHDLSVSRTSFKWGVPVPGDEDHVMYVWLDALTNYLTAIGYPDA---DPAKLAKFWPADLHMVGKDILRFHAVYWPAFLLAAGITPPKRVFAHGWWTNEGQKISKSLGNVIDPYDLTDRYGLDQTRYFLLREVPFGNDGDFSHRSMVNRMNSELANDLGNMCQRVLSMIHKNCNASVPT-AGDFTEADLAILGKAYGMLDTVRPLF-DAQAFHKGIEAIWELVGDANRYVDEMAPWGLKKTDPARMETVLYVLAEVIRHVGILVQPLMPASAAKILDQLVLPLDQRGFEQLGADHALVAGTKLPKPEGVFPRYVED 514          
BLAST of EWM29850.1 vs. NCBI_GenBank
Match: gi|740146448|ref|WP_037992649.1| (methionine--tRNA ligase [Thalassospira permensis])

HSP 1 Score: 706.442 bits (1822), Expect = 0.000e+0
Identity = 338/512 (66.02%), Postives = 405/512 (79.10%), Query Frame = 0
Query:   90 KTGYYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGRDVFFLTGTDEHGQKVEQSAAKAGKSPQTFVDEVSQNFRSLAKIMEFTNDKFIRTTQADHKAAVQALWKQLEAAGHIYLGAYEGWYSVRDEAYYTESELV--DGK--APTGAEVVWVVKEPSYFFKLSAWQEPLLEFYAAHPNFIAPESRRNEVISFVKGGLKDLSISRTTFKWGVPVPEDDDHVMYVWMDALTNYISALGYPEAKGSSPTPYQRFWPADLHVVGKDILRFHAVYWPAFLMAAGLAPPRRIFAHGWWTKDRQKISKSLGNVIDPVRLVEQFGLDPTRYFLMSEVPFGNDGDFSNDAFVRRVNNQLANELGNLFQRSLAFIAKNCEGQVPEPTSALTEADVAMLRSARGLLETVRPLVRDEQALHRYSEALNRVVNEGNRYFDEQAPWTLRKTDKDRMATVLYVTVEALRSVALLYQPLIPASASKLLDLLAVPSERRTFADVGADAALTPGTPLPKPEGVFPR 597
            K  YY+TTPIYYVNDKPHIGHAYTTLACDV+ARF RLDG DV FLTGTDEHGQKV++SAA  G  PQTF D+VSQNFR LA  M ++ND FIRTT+  HK A QALW  L   G IYLG+Y+GWYSVRDEA+Y E EL+  DG+  APTGA V W V EPSYFFKLSAW + LL+FY  +P+FIAP+SRRNEVISFVKGG+ DLS+SRT+FKWGVPVP D+DHVMYVW+DALTNY++A+GYP+A    P   ++FWPADLH+VGKDILRFHAVYWPAFL+AAG+ PP+R+FAHGWWT + QKISKSLGNVIDP  L +++GLD TRYFL+ EVPFGNDGDFS+ + V R+N++LAN+LGN+ QR L+ I KNC   +P      TE+D A+L  A G+L+TVRPL  D QA H+  EA+  +V + NRY DE APW L+KTD  RM TVLYV  E +R V +L QPL+PASA+K+LD L +P+++R F  +GAD AL  GT LPKPEGVFPR
Sbjct:    5 KQPYYITTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGYDVMFLTGTDEHGQKVDKSAAAKGIDPQTFTDQVSQNFRDLAVHMNYSNDDFIRTTEERHKKACQALWNTLLEKGEIYLGSYDGWYSVRDEAFYGEKELIEKDGEKVAPTGAPVEW-VSEPSYFFKLSAWGDRLLKFYDDNPDFIAPQSRRNEVISFVKGGMHDLSVSRTSFKWGVPVPGDEDHVMYVWLDALTNYLTAIGYPDA---DPAKLEKFWPADLHMVGKDILRFHAVYWPAFLLAAGITPPKRVFAHGWWTNEGQKISKSLGNVIDPYDLTDRYGLDQTRYFLLREVPFGNDGDFSHRSMVNRMNSELANDLGNMCQRVLSMIHKNCNASIPT-VGDFTESDKAILGKAYGMLDTVRPLF-DAQAFHKGIEAIWELVGDANRYVDEMAPWGLKKTDPARMETVLYVLAEVIRHVGILVQPLMPASAAKILDQLVLPTDQRGFEQLGADHALVAGTKLPKPEGVFPR 510          
BLAST of EWM29850.1 vs. NCBI_GenBank
Match: gi|219123327|ref|XP_002181978.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406579|gb|EEC46518.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 705.671 bits (1820), Expect = 0.000e+0
Identity = 328/512 (64.06%), Postives = 397/512 (77.54%), Query Frame = 0
Query:   90 KTGYYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGRDVFFLTGTDEHGQKVEQSAAKAGKSPQTFVDEVSQNFRSLAKIMEFTNDKFIRTTQADHKAAVQALWKQLEAAGHIYLGAYEGWYSVRDEAYYTESELVDGKAPTGAEVVWVVKEPSYFFKLSAWQEPLLEFYAAHPNFIAPESRRNEVISFVKGGLKDLSISRTTFKWGVPVPEDDDHVMYVWMDALTNYISALGYPEAKGSSPTPYQRFWPADLHVVGKDILRFHAVYWPAFLMAAGLAPPRRIFAHGWWTKDRQKISKSLGNVIDPVRLVEQFGLDPTRYFLMSEVPFGNDGDFSNDAFVRRVNNQLANELGNLFQRSLAFIAKNCEGQVPEPTSALTEADVAMLRSARGLLETVRPLVRDEQALHRYSEALNRVVNEGNRYFDEQAPWTLRKTDKDRMATVLYVTVEALRSVALLYQPLIPASASKLLDLLAVPSERRTFADVGADAALTPGTPLPKPEGVFPRVEDP 601
            K  + +TTPIYYVNDKPHIGHAYT+ ACDVIARFMRL GRDVFFL+GTDEHG+KVEQSA K    PQ FVD+VS NFR L ++M  +NDKFIRTT  DHK +VQ  W  +   G+IY+G Y GWYSVRDE +YTESEL+DGKAPTGAEV WV KE SYFFKLS ++E LL+ Y  +P+FIAPESR+NEV+SFVKGGL+DLSISRT+FKWGVPVP+D+DHVMYVW+DALTNYISALGYP+    S   + +FWPA +H+VGKDILRFHAVYWPA LMAA L  P+R+FAHGWWTKD QKISKS+GNVIDPV LV ++G+D TR+FLMSEV FGNDGDFS+ A +++ N  LANELGNL QR+L+ + KNCE  VP P  A T  D A+L SAR L   V   +  +Q++ +Y  A+  ++ E N+Y DE APW L+KTD +RMATVLYV +E LR  A+LYQPLIP SA K+LD L VP+  RTF  +  + ++  G  + KP G+FPR+E P
Sbjct:   59 KRPFQITTPIYYVNDKPHIGHAYTSTACDVIARFMRLSGRDVFFLSGTDEHGEKVEQSAEKQNMDPQGFVDQVSVNFRELLELMNISNDKFIRTTSEDHKKSVQHFWNVMVEKGYIYMGTYSGWYSVRDECFYTESELIDGKAPTGAEVSWVAKEESYFFKLSQFEEKLLDLYERNPHFIAPESRKNEVVSFVKGGLRDLSISRTSFKWGVPVPDDEDHVMYVWVDALTNYISALGYPDMGEGS--DFSKFWPASIHIVGKDILRFHAVYWPAMLMAAELPLPKRLFAHGWWTKDGQKISKSIGNVIDPVELVNKYGVDQTRFFLMSEVNFGNDGDFSDRAMIQKCNTNLANELGNLCQRTLSLVFKNCEKAVPNPVGAYTPEDEALLESARNLRNKVATEI-SQQSILKYVHAMVEMIWEANKYIDEMAPWALKKTDPERMATVLYVLLEVLRYSAILYQPLIPESAGKILDQLTVPANERTFLHLSEEYSIKAGAAISKPVGIFPRIEMP 567          
BLAST of EWM29850.1 vs. NCBI_GenBank
Match: gi|660520696|gb|KEO50675.1| (methionyl-tRNA synthetase [Thalassospira permensis NBRC 106175])

HSP 1 Score: 705.286 bits (1819), Expect = 0.000e+0
Identity = 338/512 (66.02%), Postives = 405/512 (79.10%), Query Frame = 0
Query:   90 KTGYYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGRDVFFLTGTDEHGQKVEQSAAKAGKSPQTFVDEVSQNFRSLAKIMEFTNDKFIRTTQADHKAAVQALWKQLEAAGHIYLGAYEGWYSVRDEAYYTESELV--DGK--APTGAEVVWVVKEPSYFFKLSAWQEPLLEFYAAHPNFIAPESRRNEVISFVKGGLKDLSISRTTFKWGVPVPEDDDHVMYVWMDALTNYISALGYPEAKGSSPTPYQRFWPADLHVVGKDILRFHAVYWPAFLMAAGLAPPRRIFAHGWWTKDRQKISKSLGNVIDPVRLVEQFGLDPTRYFLMSEVPFGNDGDFSNDAFVRRVNNQLANELGNLFQRSLAFIAKNCEGQVPEPTSALTEADVAMLRSARGLLETVRPLVRDEQALHRYSEALNRVVNEGNRYFDEQAPWTLRKTDKDRMATVLYVTVEALRSVALLYQPLIPASASKLLDLLAVPSERRTFADVGADAALTPGTPLPKPEGVFPR 597
            K  YY+TTPIYYVNDKPHIGHAYTTLACDV+ARF RLDG DV FLTGTDEHGQKV++SAA  G  PQTF D+VSQNFR LA  M ++ND FIRTT+  HK A QALW  L   G IYLG+Y+GWYSVRDEA+Y E EL+  DG+  APTGA V W V EPSYFFKLSAW + LL+FY  +P+FIAP+SRRNEVISFVKGG+ DLS+SRT+FKWGVPVP D+DHVMYVW+DALTNY++A+GYP+A    P   ++FWPADLH+VGKDILRFHAVYWPAFL+AAG+ PP+R+FAHGWWT + QKISKSLGNVIDP  L +++GLD TRYFL+ EVPFGNDGDFS+ + V R+N++LAN+LGN+ QR L+ I KNC   +P      TE+D A+L  A G+L+TVRPL  D QA H+  EA+  +V + NRY DE APW L+KTD  RM TVLYV  E +R V +L QPL+PASA+K+LD L +P+++R F  +GAD AL  GT LPKPEGVFPR
Sbjct:   12 KQPYYITTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGYDVMFLTGTDEHGQKVDKSAAAKGIDPQTFTDQVSQNFRDLAVHMNYSNDDFIRTTEERHKKACQALWNTLLEKGEIYLGSYDGWYSVRDEAFYGEKELIEKDGEKVAPTGAPVEW-VSEPSYFFKLSAWGDRLLKFYDDNPDFIAPQSRRNEVISFVKGGMHDLSVSRTSFKWGVPVPGDEDHVMYVWLDALTNYLTAIGYPDA---DPAKLEKFWPADLHMVGKDILRFHAVYWPAFLLAAGITPPKRVFAHGWWTNEGQKISKSLGNVIDPYDLTDRYGLDQTRYFLLREVPFGNDGDFSHRSMVNRMNSELANDLGNMCQRVLSMIHKNCNASIPT-VGDFTESDKAILGKAYGMLDTVRPLF-DAQAFHKGIEAIWELVGDANRYVDEMAPWGLKKTDPARMETVLYVLAEVIRHVGILVQPLMPASAAKILDQLVLPTDQRGFEQLGADHALVAGTKLPKPEGVFPR 517          
BLAST of EWM29850.1 vs. NCBI_GenBank
Match: gi|1210521902|dbj|GAX19337.1| (methionyl-tRNA synthetase [Fistulifera solaris])

HSP 1 Score: 704.131 bits (1816), Expect = 0.000e+0
Identity = 340/564 (60.28%), Postives = 419/564 (74.29%), Query Frame = 0
Query:   38 RRKSAAFVFPGARGYIPRLRSHSSLLFNERRFFSTSVSAAATVKDSPGSNSKKTGYYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGRDVFFLTGTDEHGQKVEQSAAKAGKSPQTFVDEVSQNFRSLAKIMEFTNDKFIRTTQADHKAAVQALWKQLEAAGHIYLGAYEGWYSVRDEAYYTESELVDGKAPTGAEVVWVVKEPSYFFKLSAWQEPLLEFYAAHPNFIAPESRRNEVISFVKGGLKDLSISRTTFKWGVPVPEDDDHVMYVWMDALTNYISALGYPEAKGSSPTPYQRFWPADLHVVGKDILRFHAVYWPAFLMAAGLAPPRRIFAHGWWTKDRQKISKSLGNVIDPVRLVEQFGLDPTRYFLMSEVPFGNDGDFSNDAFVRRVNNQLANELGNLFQRSLAFIAKNCEGQVPEPTSALTEADVAMLRSARGLLETVRPLVRDEQALHRYSEALNRVVNEGNRYFDEQAPWTLRKTDKDRMATVLYVTVEALRSVALLYQPLIPASASKLLDLLAVPSERRTFADVGADAALTPGTPLPKPEGVFPRVEDP 601
            +R  +AF  P  R  +P+            + +S   + A +  D       K  + +TTPIYYVNDKPHIGHAYT++ACDVIARFMRL GR+VFFL+GTDEHGQKVEQ+A   G  PQ FVD VS NFR L +++  +ND FIRTT+  HK AV AL+ ++   G+IYL  YEGWYSVRDE +YTESEL+DGKAPTGAEV WV KE SYFFKLSA+Q+ LLEFY  +P FIAPESRRNEV+SFVK GLKDLS+SRT+FKWG+P+ +D +H+ YVW+DALTNYISALGYPE  G     Y+ FWPA LH+VGKDILRFHA+YWPAFLMAA L  P+R+FAHGWWTKD QKISKSLGNVIDPV LV+++G+D TR+FLM+EV FGNDGDFS+ A + +VN  LANELGNL QR+L+ + KNC+  VP      TEAD A+L SAR L E     +   QA+H+Y E + R+V E N+Y DE  PW+L+KTD +RMATVLYV +E LR V +LYQPLIP +A+K+LD L+VP + RTF+ +     +  G+ +PKPEGVFPR+E P
Sbjct:    9 KRTVSAFTAPSHRLLLPKWT----------QLYSYLGTTATSFDDG------KRPFQITTPIYYVNDKPHIGHAYTSIACDVIARFMRLSGREVFFLSGTDEHGQKVEQTAKSKGMEPQEFVDSVSINFRDLLELLNISNDAFIRTTEDHHKRAVLALFDKMVENGYIYLDNYEGWYSVRDECFYTESELIDGKAPTGAEVEWVAKEESYFFKLSAFQDKLLEFYEQNPGFIAPESRRNEVVSFVKRGLKDLSVSRTSFKWGIPMKQDPNHIFYVWVDALTNYISALGYPETGGK----YKTFWPAALHIVGKDILRFHAIYWPAFLMAADLPLPKRLFAHGWWTKDGQKISKSLGNVIDPVDLVKKYGVDQTRFFLMAEVSFGNDGDFSDKAMITKVNTNLANELGNLCQRTLSMVFKNCDKAVPTSVGPFTEADNALLASARELREKAAAEI-SVQAIHKYVELMVRIVWETNKYIDEMEPWSLKKTDPERMATVLYVIMEVLRHVGILYQPLIPEAANKILDALSVPKDERTFSHLDDAFRIKEGSVIPKPEGVFPRMEMP 551          
The following BLAST results are available for this feature:
BLAST of EWM29850.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112431|gb|EWM29850.1|0.000e+0100.00methionyl-trna synthetase [Nannochloropsis gaditan... [more]
gi|497225730|ref|WP_009539992.1|0.000e+066.03methionine--tRNA ligase [Caenispirillum salinarum]... [more]
gi|299471948|emb|CBN79628.1|0.000e+065.05Methionyl-tRNA synthetase [Ectocarpus siliculosus][more]
gi|1057125335|ref|WP_068519211.1|0.000e+065.45methionine--tRNA ligase [Thalassospira sp. MCCC 1A... [more]
gi|1210516514|dbj|GAX24564.1|0.000e+062.68methionyl-tRNA synthetase [Fistulifera solaris][more]
gi|1098560142|ref|WP_071240210.1|0.000e+066.47methionine--tRNA ligase [Thalassospira sp. MIT1004... [more]
gi|740146448|ref|WP_037992649.1|0.000e+066.02methionine--tRNA ligase [Thalassospira permensis][more]
gi|219123327|ref|XP_002181978.1|0.000e+064.06predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|660520696|gb|KEO50675.1|0.000e+066.02methionyl-tRNA synthetase [Thalassospira permensis... [more]
gi|1210521902|dbj|GAX19337.1|0.000e+060.28methionyl-tRNA synthetase [Fistulifera solaris][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna882rna882Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications