EWM21866.1, cds8808 (CDS) Nannochloropsis gaditana

Overview
NameEWM21866.1
Unique Namecds8808
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:276169..278022 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21866.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100169g8.557.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:276169..278022 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM21866.1 vs. NCBI_GenBank
Match: gi|585102209|gb|EWM21866.1| (hypothetical protein Naga_100169g8 [Nannochloropsis gaditana])

HSP 1 Score: 1221.84 bits (3160), Expect = 0.000e+0
Identity = 617/617 (100.00%), Postives = 617/617 (100.00%), Query Frame = 0 
Query:    1 MSSHQQQLEQQRAAEAYYRNMTPEQYQAYYNQYYAQQQQHQQYQQGGYGYPQTATTSGNRKSRGGVASAAAAADAYQKYYQDYYQQYGVYPGGAYGQGQAAVAGASGETYGASAGGYPHGASSHSGAASSSYHEGYTGGAGQASVGGLDAEGVKKLVAKNERLMVKILECEKALEKTGPIPRQDLLDRVNKFKGRLQAHLTKMATWMDKSKYERSRRFQPQKATYRTVVLENKILKEPRAAANSSLVAASAPGQGAHQRQGSGGRAASASSFYQAATTAMQPSAAAATASTAAAATTRSRYSGVYYDERGSVWSAWLTLAGGHNKCLGYFRQEMDAVEAQQQAISEYRTTGQITGPFKGQLGALPEGVQPSSVQEQHIKSVAETAKKLKAEKARKRRKSAAGGGEGEGEESEYEGSGGEAAGGSDSEREEGHGSGGLGMAGGASGGNKRKSVKQGQGVAASAAAYEQYQRQVAQQQGAGATEAPGQQQWTPEAIAKYYEDMAKAYPEHAVYYQQQAAAHVLQQQQMAAAAAAAAGRDTGPGTGQPAALSSLYTQQQQQLLRQQQQSYPGAMGGLGGAASAELKEGERIKVRVTVNGAALNPEPHPLYIRKGVVATAM 617
            MSSHQQQLEQQRAAEAYYRNMTPEQYQAYYNQYYAQQQQHQQYQQGGYGYPQTATTSGNRKSRGGVASAAAAADAYQKYYQDYYQQYGVYPGGAYGQGQAAVAGASGETYGASAGGYPHGASSHSGAASSSYHEGYTGGAGQASVGGLDAEGVKKLVAKNERLMVKILECEKALEKTGPIPRQDLLDRVNKFKGRLQAHLTKMATWMDKSKYERSRRFQPQKATYRTVVLENKILKEPRAAANSSLVAASAPGQGAHQRQGSGGRAASASSFYQAATTAMQPSAAAATASTAAAATTRSRYSGVYYDERGSVWSAWLTLAGGHNKCLGYFRQEMDAVEAQQQAISEYRTTGQITGPFKGQLGALPEGVQPSSVQEQHIKSVAETAKKLKAEKARKRRKSAAGGGEGEGEESEYEGSGGEAAGGSDSEREEGHGSGGLGMAGGASGGNKRKSVKQGQGVAASAAAYEQYQRQVAQQQGAGATEAPGQQQWTPEAIAKYYEDMAKAYPEHAVYYQQQAAAHVLQQQQMAAAAAAAAGRDTGPGTGQPAALSSLYTQQQQQLLRQQQQSYPGAMGGLGGAASAELKEGERIKVRVTVNGAALNPEPHPLYIRKGVVATAM
Sbjct:    1 MSSHQQQLEQQRAAEAYYRNMTPEQYQAYYNQYYAQQQQHQQYQQGGYGYPQTATTSGNRKSRGGVASAAAAADAYQKYYQDYYQQYGVYPGGAYGQGQAAVAGASGETYGASAGGYPHGASSHSGAASSSYHEGYTGGAGQASVGGLDAEGVKKLVAKNERLMVKILECEKALEKTGPIPRQDLLDRVNKFKGRLQAHLTKMATWMDKSKYERSRRFQPQKATYRTVVLENKILKEPRAAANSSLVAASAPGQGAHQRQGSGGRAASASSFYQAATTAMQPSAAAATASTAAAATTRSRYSGVYYDERGSVWSAWLTLAGGHNKCLGYFRQEMDAVEAQQQAISEYRTTGQITGPFKGQLGALPEGVQPSSVQEQHIKSVAETAKKLKAEKARKRRKSAAGGGEGEGEESEYEGSGGEAAGGSDSEREEGHGSGGLGMAGGASGGNKRKSVKQGQGVAASAAAYEQYQRQVAQQQGAGATEAPGQQQWTPEAIAKYYEDMAKAYPEHAVYYQQQAAAHVLQQQQMAAAAAAAAGRDTGPGTGQPAALSSLYTQQQQQLLRQQQQSYPGAMGGLGGAASAELKEGERIKVRVTVNGAALNPEPHPLYIRKGVVATAM 617
[Close]
BLAST of EWM21866.1 vs. NCBI_GenBank
Match: gi|553192828|ref|XP_005855654.1| (hypothetical protein NGA_0622600 [Nannochloropsis gaditana CCMP526] >gi|422293402|gb|EKU20702.1| hypothetical protein NGA_0622600 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1172.53 bits (3032), Expect = 0.000e+0
Identity = 595/617 (96.43%), Postives = 597/617 (96.76%), Query Frame = 0 
Query:    1 MSSHQQQLEQQRAAEAYYRNMTPEQYQAYYNQYYAQQQQHQQYQQGGYGYPQTATTSGNRKSRGGVASAAAAADAYQKYYQDYYQQYGVYPGGAYGQGQAAVAGASGETYGASAGGYPHGASSHSGAASSSYHEGYTGGAGQASVGGLDAEGVKKLVAKNERLMVKILECEKALEKTGPIPRQDLLDRVNKFKGRLQAHLTKMATWMDKSKYERSRRFQPQKATYRTVVLENKILKEPRAAANSSLVAASAPGQGAHQRQGSGGRAASASSFYQAATTAMQPSAAAATASTAAAATTRSRYSGVYYDERGSVWSAWLTLAGGHNKCLGYFRQEMDAVEAQQQAISEYRTTGQITGPFKGQLGALPEGVQPSSVQEQHIKSVAETAKKLKAEKARKRRKSAAGGGEGEGEESEYEGSGGEAAGGSDSEREEGHGSGGLGMAGGASGGNKRKSVKQGQGVAASAAAYEQYQRQVAQQQGAGATEAPGQQQWTPEAIAKYYEDMAKAYPEHAVYYQQQAAAHVLQQQQMAAAAAAAAGRDTGPGTGQPAALSSLYTQQQQQLLRQQQQSYPGAMGGLGGAASAELKEGERIKVRVTVNGAALNPEPHPLYIRKGVVATAM 617
            MSSHQQQLEQQRAAEAYYRNMTPEQYQAYYNQYYAQQQQHQQYQQGGYGYPQ+A TSGNRKSRGGVASAAAAADAYQKYYQDYYQQYGVYPGGAYGQGQAAVAGASG TYGASAGGYPHGASSHSGAASSSYHEGYTGGAGQASVGGLDAEGVKKLVAKNERLMVKILECEKALEKTGPIPRQDLLDRVNKFKGRLQAHLTKMATWMDKSKYERSRRFQPQKATYRTVVLENKILKEPRAAANSSLVAASAPGQGAHQRQGSGGRAASASSFYQAATTAMQPSAAAATASTAAAATTRSRYSGVYYDERGSVWSAWLTLAGGHNKCLGYFRQEMDAVEAQQQAISEYRTTGQITGPFKGQLGALPEG+QPSSVQEQHIKSVAETAKKLKAEKARKRRKSAAGGGEGEGEESEYEGSGGEAAGGSDSEREEGHGSGGLGMAGGASGGNKRKSVKQGQGVAASAAAYEQYQR                 QWTPEAIAKYYEDMAKAYPEHA YYQQQAAAHVLQQQQMAAAAAAAAGRDTGPGTGQPAALSSLYTQQQQQLLRQQQQSYPGAMGGLGGAASAELKEGERIKVRVTVNGAALNPEPHPLYIRKGVVATAM
Sbjct:    1 MSSHQQQLEQQRAAEAYYRNMTPEQYQAYYNQYYAQQQQHQQYQQGGYGYPQSAATSGNRKSRGGVASAAAAADAYQKYYQDYYQQYGVYPGGAYGQGQAAVAGASGATYGASAGGYPHGASSHSGAASSSYHEGYTGGAGQASVGGLDAEGVKKLVAKNERLMVKILECEKALEKTGPIPRQDLLDRVNKFKGRLQAHLTKMATWMDKSKYERSRRFQPQKATYRTVVLENKILKEPRAAANSSLVAASAPGQGAHQRQGSGGRAASASSFYQAATTAMQPSAAAATASTAAAATTRSRYSGVYYDERGSVWSAWLTLAGGHNKCLGYFRQEMDAVEAQQQAISEYRTTGQITGPFKGQLGALPEGMQPSSVQEQHIKSVAETAKKLKAEKARKRRKSAAGGGEGEGEESEYEGSGGEAAGGSDSEREEGHGSGGLGMAGGASGGNKRKSVKQGQGVAASAAAYEQYQR-----------------QWTPEAIAKYYEDMAKAYPEHAAYYQQQAAAHVLQQQQMAAAAAAAAGRDTGPGTGQPAALSSLYTQQQQQLLRQQQQSYPGAMGGLGGAASAELKEGERIKVRVTVNGAALNPEPHPLYIRKGVVATAM 600
The following BLAST results are available for this feature:
BLAST of EWM21866.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585102209|gb|EWM21866.1|0.000e+0100.00hypothetical protein Naga_100169g8 [Nannochloropsi... [more]
gi|553192828|ref|XP_005855654.1|0.000e+096.43hypothetical protein NGA_0622600 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8838rna8838Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications