EWM21871.1, cds8806 (CDS) Nannochloropsis gaditana

Overview
NameEWM21871.1
Unique Namecds8806
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:273267..273755 +

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Properties
Property NameValue
Protein idEWM21871.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100169g6.562.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:273267..273755 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-rel_dom
IPR000626Ubiquitin-like
Homology
[Close]
BLAST of EWM21871.1 vs. NCBI_GenBank
Match: gi|585102214|gb|EWM21871.1| (hypothetical protein Naga_100169g6 [Nannochloropsis gaditana])

HSP 1 Score: 334.339 bits (856), Expect = 3.305e-116
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0 
Query:    1 MPLYDHASLIGEEDKAWGETPGGGSPLTNNLIVRGPGGQCYPLNVQGDMRVQDLKAQVATAIGVAVEEQYLLHRCKILQDHEALASYDLGTQHHLSKKAMATYQMPTVEVGIRQRGGCFIVTFTLLTILFFATLCAPLTCGTSLCLYLFLLPPVFILPFFCL 162
            MPLYDHASLIGEEDKAWGETPGGGSPLTNNLIVRGPGGQCYPLNVQGDMRVQDLKAQVATAIGVAVEEQYLLHRCKILQDHEALASYDLGTQHHLSKKAMATYQMPTVEVGIRQRGGCFIVTFTLLTILFFATLCAPLTCGTSLCLYLFLLPPVFILPFFCL
Sbjct:    1 MPLYDHASLIGEEDKAWGETPGGGSPLTNNLIVRGPGGQCYPLNVQGDMRVQDLKAQVATAIGVAVEEQYLLHRCKILQDHEALASYDLGTQHHLSKKAMATYQMPTVEVGIRQRGGCFIVTFTLLTILFFATLCAPLTCGTSLCLYLFLLPPVFILPFFCL 162
[Close]
BLAST of EWM21871.1 vs. NCBI_GenBank
Match: gi|553192824|ref|XP_005855653.1| (ubiquitin domain containing protein [Nannochloropsis gaditana CCMP526] >gi|422293401|gb|EKU20701.1| ubiquitin domain containing protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 329.717 bits (844), Expect = 2.362e-114
Identity = 160/162 (98.77%), Postives = 161/162 (99.38%), Query Frame = 0 
Query:    1 MPLYDHASLIGEEDKAWGETPGGGSPLTNNLIVRGPGGQCYPLNVQGDMRVQDLKAQVATAIGVAVEEQYLLHRCKILQDHEALASYDLGTQHHLSKKAMATYQMPTVEVGIRQRGGCFIVTFTLLTILFFATLCAPLTCGTSLCLYLFLLPPVFILPFFCL 162
            MPLYDHA LIGEEDKAWGETPGGGSPLTNNLIVRGPGGQCYPLNVQGDMRVQDLKAQVATAIGVAVEEQYLLHRCKILQDHEALASYDLGTQHHLSKKAMATYQ+PTVEVGIRQRGGCFIVTFTLLTILFFATLCAPLTCGTSLCLYLFLLPPVFILPFFCL
Sbjct:    1 MPLYDHALLIGEEDKAWGETPGGGSPLTNNLIVRGPGGQCYPLNVQGDMRVQDLKAQVATAIGVAVEEQYLLHRCKILQDHEALASYDLGTQHHLSKKAMATYQVPTVEVGIRQRGGCFIVTFTLLTILFFATLCAPLTCGTSLCLYLFLLPPVFILPFFCL 162
The following BLAST results are available for this feature:
BLAST of EWM21871.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585102214|gb|EWM21871.1|3.305e-116100.00hypothetical protein Naga_100169g6 [Nannochloropsi... [more]
gi|553192824|ref|XP_005855653.1|2.362e-11498.77ubiquitin domain containing protein [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8836rna8836Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications