EWM21864.1, cds8803 (CDS) Nannochloropsis gaditana

Overview
NameEWM21864.1
Unique Namecds8803
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:269731..269934 +
Alignment locationKK037250.1:270010..270080 +
Alignment locationKK037250.1:270169..270307 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21864.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100169g3.555.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:269731..269934 +
KK037250.1supercontigKK037250.1:270010..270080 +
KK037250.1supercontigKK037250.1:270169..270307 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM21864.1 vs. NCBI_GenBank
Match: gi|585102207|gb|EWM21864.1| (hypothetical protein Naga_100169g3 [Nannochloropsis gaditana])

HSP 1 Score: 283.878 bits (725), Expect = 4.687e-97
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0 
Query:    1 MLDMCQNLEQDKVICMGDLCQCCGWWHLRYAQAIEALPIIILLDACGMFLDLRDDLSVAPHGRAVPHELCFYAAHFVARRYIKRCGLSKQKRPGRPSPNKLQTVRCMAHCGTDVLRHLKLVYVHGRHAGLVSYPERI 137
            MLDMCQNLEQDKVICMGDLCQCCGWWHLRYAQAIEALPIIILLDACGMFLDLRDDLSVAPHGRAVPHELCFYAAHFVARRYIKRCGLSKQKRPGRPSPNKLQTVRCMAHCGTDVLRHLKLVYVHGRHAGLVSYPERI
Sbjct:    1 MLDMCQNLEQDKVICMGDLCQCCGWWHLRYAQAIEALPIIILLDACGMFLDLRDDLSVAPHGRAVPHELCFYAAHFVARRYIKRCGLSKQKRPGRPSPNKLQTVRCMAHCGTDVLRHLKLVYVHGRHAGLVSYPERI 137
The following BLAST results are available for this feature:
BLAST of EWM21864.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102207|gb|EWM21864.1|4.687e-97100.00hypothetical protein Naga_100169g3 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8833rna8833Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications