EWM21882.1, cds8795 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21882.1 vs. NCBI_GenBank
Match: gi|585102226|gb|EWM21882.1| (epidermal retinol dehydrogenase 2 [Nannochloropsis gaditana]) HSP 1 Score: 801.201 bits (2068), Expect = 0.000e+0 Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 0
Query: 1 MGHDPRRNLGVAWRARELWRILSIALIYFWSPHTLTVEETRTSRQASFPITDKPRLQSQGVPAAYKMSPWKETVADVWAHIYGFIQCVGAILWSLVLLQVEYFDLLFPKRKSFRGETILITGGASGIGRLMALKFAAYENTTIIIWDLNEGAMKAVAREVEGIGARVFTYKVDVSKRERVYEVAKQMRKDVGKSVSVLVNNAGIVAGKPFLEGDDAYSLKTMEVNVIAHFWTIKAFLPAMVEANHGHIITVASTAGLVGVDGLADYCTSKAAAISFHEGIRTEVRRLKRPGIRMTLVNPYFIDTGMFTGAKTKAPILLPILQPEYVATSIIDAAEKNRNLLNLPRYTYILMVTNGVPALVRDFIYDFMGIGENMADFKQTRTKSLKEQ 388
MGHDPRRNLGVAWRARELWRILSIALIYFWSPHTLTVEETRTSRQASFPITDKPRLQSQGVPAAYKMSPWKETVADVWAHIYGFIQCVGAILWSLVLLQVEYFDLLFPKRKSFRGETILITGGASGIGRLMALKFAAYENTTIIIWDLNEGAMKAVAREVEGIGARVFTYKVDVSKRERVYEVAKQMRKDVGKSVSVLVNNAGIVAGKPFLEGDDAYSLKTMEVNVIAHFWTIKAFLPAMVEANHGHIITVASTAGLVGVDGLADYCTSKAAAISFHEGIRTEVRRLKRPGIRMTLVNPYFIDTGMFTGAKTKAPILLPILQPEYVATSIIDAAEKNRNLLNLPRYTYILMVTNGVPALVRDFIYDFMGIGENMADFKQTRTKSLKEQ
Sbjct: 1 MGHDPRRNLGVAWRARELWRILSIALIYFWSPHTLTVEETRTSRQASFPITDKPRLQSQGVPAAYKMSPWKETVADVWAHIYGFIQCVGAILWSLVLLQVEYFDLLFPKRKSFRGETILITGGASGIGRLMALKFAAYENTTIIIWDLNEGAMKAVAREVEGIGARVFTYKVDVSKRERVYEVAKQMRKDVGKSVSVLVNNAGIVAGKPFLEGDDAYSLKTMEVNVIAHFWTIKAFLPAMVEANHGHIITVASTAGLVGVDGLADYCTSKAAAISFHEGIRTEVRRLKRPGIRMTLVNPYFIDTGMFTGAKTKAPILLPILQPEYVATSIIDAAEKNRNLLNLPRYTYILMVTNGVPALVRDFIYDFMGIGENMADFKQTRTKSLKEQ 388
BLAST of EWM21882.1 vs. NCBI_GenBank
Match: gi|553196376|ref|XP_005856330.1| (epidermal retinol dehydrogenase 2-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422292731|gb|EKU20033.1| epidermal retinol dehydrogenase 2-like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 679.093 bits (1751), Expect = 0.000e+0 Identity = 330/331 (99.70%), Postives = 331/331 (100.00%), Query Frame = 0
Query: 58 SQGVPAAYKMSPWKETVADVWAHIYGFIQCVGAILWSLVLLQVEYFDLLFPKRKSFRGETILITGGASGIGRLMALKFAAYENTTIIIWDLNEGAMKAVAREVEGIGARVFTYKVDVSKRERVYEVAKQMRKDVGKSVSVLVNNAGIVAGKPFLEGDDAYSLKTMEVNVIAHFWTIKAFLPAMVEANHGHIITVASTAGLVGVDGLADYCTSKAAAISFHEGIRTEVRRLKRPGIRMTLVNPYFIDTGMFTGAKTKAPILLPILQPEYVATSIIDAAEKNRNLLNLPRYTYILMVTNGVPALVRDFIYDFMGIGENMADFKQTRTKSLKEQ 388
SQGVPAAYKMSPWKETVADVWAHIYGFIQCVGAILWSLVLLQVEYFDLLFPKRKSFRGETILITGGASGIGRLMALKFAAYENTTIIIWDLNEGAMKAVAREVEGIGARVFTYKVDVS+RERVYEVAKQMRKDVGKSVSVLVNNAGIVAGKPFLEGDDAYSLKTMEVNVIAHFWTIKAFLPAMVEANHGHIITVASTAGLVGVDGLADYCTSKAAAISFHEGIRTEVRRLKRPGIRMTLVNPYFIDTGMFTGAKTKAPILLPILQPEYVATSIIDAAEKNRNLLNLPRYTYILMVTNGVPALVRDFIYDFMGIGENMADFKQTRTKSLKEQ
Sbjct: 1 SQGVPAAYKMSPWKETVADVWAHIYGFIQCVGAILWSLVLLQVEYFDLLFPKRKSFRGETILITGGASGIGRLMALKFAAYENTTIIIWDLNEGAMKAVAREVEGIGARVFTYKVDVSERERVYEVAKQMRKDVGKSVSVLVNNAGIVAGKPFLEGDDAYSLKTMEVNVIAHFWTIKAFLPAMVEANHGHIITVASTAGLVGVDGLADYCTSKAAAISFHEGIRTEVRRLKRPGIRMTLVNPYFIDTGMFTGAKTKAPILLPILQPEYVATSIIDAAEKNRNLLNLPRYTYILMVTNGVPALVRDFIYDFMGIGENMADFKQTRTKSLKEQ 331
BLAST of EWM21882.1 vs. NCBI_GenBank
Match: gi|697479052|ref|XP_009671825.1| (PREDICTED: epidermal retinol dehydrogenase 2-like [Struthio camelus australis] >gi|697479056|ref|XP_009671826.1| PREDICTED: epidermal retinol dehydrogenase 2-like [Struthio camelus australis]) HSP 1 Score: 280.026 bits (715), Expect = 5.459e-89 Identity = 148/301 (49.17%), Postives = 203/301 (67.44%), Query Frame = 0
Query: 84 FIQCVGAILWSLVLLQVEYFDLLFPKRK-SFRGETILITGGASGIGRLMALKFAAYENTTIIIWDLNEGAMKAVAREVEGIGA-RVFTYKVDVSKRERVYEVAKQMRKDVGKSVSVLVNNAGIVAGKPFLEGDDAYSLKTMEVNVIAHFWTIKAFLPAMVEANHGHIITVASTAGLVGVDGLADYCTSKAAAISFHEGIRTEVRRLKRPGIRMTLVNPYFIDTGMFTGAKTKAPILLPILQPEYVATSIIDAAEKNRNLLNLPRYTYILM-VTNGVPALVRDFIYDFMGIGENMADFKQTR 381
F++ + I S L L+ PKRK S GE +LITG SGIGRL+++KFA T+++WD+N+ +K +R + GA RV +Y D SKR+ V+ A Q++K+VG VS+L+NNAGIV GK F++ D+ KTMEVN++AHFWT KAFLPAM+ +NHGH++++AS+AGL+GV+ LADYC SK AAI F E I +E+R L + GI+ T+V PYFI+TGMF G KTK P LLPIL+PEYVA I+ A +N+ +L LPR Y+L + N +P + + DF G M F+ R
Sbjct: 4 FLEMLQVIGLSFYYLLESLVFLIVPKRKKSVEGEIVLITGAGSGIGRLLSIKFARL-GATLVLWDINQEGLKETSRLAKENGAVRVQSYICDCSKRQEVHRAADQVKKEVG-DVSILINNAGIVTGKRFIDCPDSLVEKTMEVNIMAHFWTYKAFLPAMMASNHGHLVSIASSAGLIGVNRLADYCASKFAAIGFAESISSEMRDLGKTGIKTTIVCPYFINTGMFDGCKTKWPRLLPILEPEYVAEKIVTAIRQNQEMLILPRSLYLLFALKNVLPVKLSVLLGDFAGALHFMNFFRGRR 302
BLAST of EWM21882.1 vs. NCBI_GenBank
Match: gi|1201850580|ref|XP_021241187.1| (epidermal retinol dehydrogenase 2-like [Numida meleagris] >gi|1201850582|ref|XP_021241188.1| epidermal retinol dehydrogenase 2-like [Numida meleagris] >gi|1201850584|ref|XP_021241189.1| epidermal retinol dehydrogenase 2-like [Numida meleagris]) HSP 1 Score: 278.87 bits (712), Expect = 1.403e-88 Identity = 145/277 (52.35%), Postives = 188/277 (67.87%), Query Frame = 0
Query: 105 LLFPKRK-SFRGETILITGGASGIGRLMALKFAAYENTTIIIWDLNEGAMKAVAREVEGIGA-RVFTYKVDVSKRERVYEVAKQMRKDVGKSVSVLVNNAGIVAGKPFLEGDDAYSLKTMEVNVIAHFWTIKAFLPAMVEANHGHIITVASTAGLVGVDGLADYCTSKAAAISFHEGIRTEVRRLKRPGIRMTLVNPYFIDTGMFTGAKTKAPILLPILQPEYVATSIIDAAEKNRNLLNLPRYTYILMV-TNGVPALVRDFIYDFMGIGENMADFK 378
L PKRK S GE +LITG SGIGRL+++KFA T+++WD+N+ +K R E GA RV +Y D SKR+ VY VA Q++K+VG VS+LVNNAGIV GK F+E D+ KTMEVN +AHFWT KAFLPAM+ +NHGH++++AS+AGL+GV+ LADYC SK AA+ F E I E+R L + G++ T V PYFI+TGMF G TK P LLPIL+PEYVA I+ A +++ +L LPR Y N +P V + DF+G M FK
Sbjct: 25 LFVPKRKKSVSGEIVLITGAGSGIGRLLSVKFAKL-GATLVLWDINQDGLKETVRLAEENGAVRVHSYICDCSKRQEVYRVADQVKKEVG-DVSILVNNAGIVTGKSFIESPDSLVEKTMEVNTMAHFWTYKAFLPAMIASNHGHLVSIASSAGLIGVNRLADYCASKFAAVGFAESISLEMRALGKTGVKTTTVCPYFINTGMFDGCSTKWPRLLPILEPEYVAEKIMTAIRQDQAVLLLPRILYFFFAFKNILPVKVGVLLVDFVGALHFMDSFK 299
BLAST of EWM21882.1 vs. NCBI_GenBank
Match: gi|926522002|ref|XP_013810141.1| (PREDICTED: epidermal retinol dehydrogenase 2-like [Apteryx australis mantelli]) HSP 1 Score: 278.485 bits (711), Expect = 2.493e-88 Identity = 147/298 (49.33%), Postives = 198/298 (66.44%), Query Frame = 0
Query: 84 FIQCVGAILWSLVLLQVEYFDLLFPKRK-SFRGETILITGGASGIGRLMALKFAAYENTTIIIWDLNEGAMKAVAREVEGIGA-RVFTYKVDVSKRERVYEVAKQMRKDVGKSVSVLVNNAGIVAGKPFLEGDDAYSLKTMEVNVIAHFWTIKAFLPAMVEANHGHIITVASTAGLVGVDGLADYCTSKAAAISFHEGIRTEVRRLKRPGIRMTLVNPYFIDTGMFTGAKTKAPILLPILQPEYVATSIIDAAEKNRNLLNLPRYTYILM-VTNGVPALVRDFIYDFMGIGENMADFK 378
F++ + I S L L+ PKRK + GE +LITG SGIGRL+++KFA T+++WD+N+ +K +R + GA RV +Y D SKR+ VY VA Q++K+VG VS+L+NNAGIV GK F+E D+ KTMEVN++AHFWT KAFLPAM+ +NHGH++++AS+AGL+GV+ L DYC SK AA F E I E+R L + GI+ T+V PYFI+TGMF G KTK P LLPIL+PEYVA I+ A +N+ +L LPR Y + N +P V + DF G M F+
Sbjct: 4 FLEMLKVIGLSFYYLLESLVFLIVPKRKKNVEGEIVLITGAGSGIGRLLSVKFARL-GATLVLWDINQEGLKETSRLAKENGAVRVQSYICDCSKRQEVYRVADQVKKEVG-DVSILINNAGIVTGKRFIESPDSLVEKTMEVNIMAHFWTCKAFLPAMMASNHGHLVSIASSAGLIGVNRLTDYCASKFAATGFAESISLEMRDLGKTGIKTTIVCPYFINTGMFDGCKTKWPRLLPILEPEYVAEKIVTAIRQNQEILILPRSLYFFFALKNLLPVKVSVLLGDFAGALHFMDSFR 299
BLAST of EWM21882.1 vs. NCBI_GenBank
Match: gi|719773086|ref|XP_010219888.1| (PREDICTED: epidermal retinol dehydrogenase 2 [Tinamus guttatus]) HSP 1 Score: 277.715 bits (709), Expect = 4.727e-88 Identity = 146/298 (48.99%), Postives = 201/298 (67.45%), Query Frame = 0
Query: 84 FIQCVGAILWSLVLLQVEYFDLLFPKRK-SFRGETILITGGASGIGRLMALKFAAYENTTIIIWDLNEGAMKAVAREVEGIGA-RVFTYKVDVSKRERVYEVAKQMRKDVGKSVSVLVNNAGIVAGKPFLEGDDAYSLKTMEVNVIAHFWTIKAFLPAMVEANHGHIITVASTAGLVGVDGLADYCTSKAAAISFHEGIRTEVRRLKRPGIRMTLVNPYFIDTGMFTGAKTKAPILLPILQPEYVATSIIDAAEKNRNLLNLPRYTYILM-VTNGVPALVRDFIYDFMGIGENMADFK 378
F++ + I S L L+ PKRK S GE +LITG SGIGRL+++KFA T+++WD+NE +K ++ E GA RV +Y D SKR+ VY VA Q++K+VG VS+L+NNAGIV GK F++ D+ KTMEVN++AHFWT KAFLPAM+ +NHGH++++AS+AGL+GV+ LADYC SK AA+ F E I E+R L + GI+ T+V PYFI+TGMF G +TK P +LPIL+PE+V II A +N+ +L LPR Y + N +P V + DF+G M +F+
Sbjct: 4 FLELLKVIGLSFYYLLESLVFLIIPKRKKSVAGEIVLITGAGSGIGRLLSIKFARL-GATLVLWDINEEGLKETSKLAEENGAVRVQSYICDCSKRQEVYRVADQVKKEVG-DVSILINNAGIVTGKRFIDCPDSLMEKTMEVNILAHFWTYKAFLPAMMASNHGHLVSIASSAGLIGVNRLADYCASKFAAVGFAESIGLEMRDLGKTGIKTTIVCPYFINTGMFDGCQTKWPRILPILEPEHVTEKIITAIRQNQEILILPRSLYFFFALKNVLPVKVSVLLGDFVGALHFMDNFR 299
BLAST of EWM21882.1 vs. NCBI_GenBank
Match: gi|699579790|ref|XP_009877684.1| (PREDICTED: epidermal retinol dehydrogenase 2 [Apaloderma vittatum]) HSP 1 Score: 276.944 bits (707), Expect = 8.965e-88 Identity = 139/277 (50.18%), Postives = 190/277 (68.59%), Query Frame = 0
Query: 105 LLFPKRK-SFRGETILITGGASGIGRLMALKFAAYENTTIIIWDLNEGAMKAVAR-EVEGIGARVFTYKVDVSKRERVYEVAKQMRKDVGKSVSVLVNNAGIVAGKPFLEGDDAYSLKTMEVNVIAHFWTIKAFLPAMVEANHGHIITVASTAGLVGVDGLADYCTSKAAAISFHEGIRTEVRRLKRPGIRMTLVNPYFIDTGMFTGAKTKAPILLPILQPEYVATSIIDAAEKNRNLLNLPRYTYILMVTNG-VPALVRDFIYDFMGIGENMADFK 378
L+ P+RK + GE +LITG SGIGRL++LKFA+ T+++WD+N+ +K +R E ARV +Y D SKR+ +Y VA Q++K+VG V++LVNNAGIV GK F+E D+ K MEVN +AHFWT KAFLPAM+ +NHGH++++ASTAGL GV L+DYC SK AA+ F E + E+R L G++ T+V PY I+TGMF G +TK P LLPIL+PEYVA II A +++ +L +PR Y L+ G +P V D++GI + M FK
Sbjct: 25 LVVPRRKKNVSGEIVLITGAGSGIGRLLSLKFASL-GATLVLWDINQEGLKETSRLASENGAARVQSYVCDCSKRQDIYRVADQVKKEVG-DVTILVNNAGIVTGKSFIESPDSLVEKNMEVNTMAHFWTYKAFLPAMMASNHGHLVSIASTAGLTGVSRLSDYCASKFAAVGFAESVDFEMRSLGMTGVKTTIVCPYLINTGMFDGCRTKWPTLLPILEPEYVAEKIITAIRQDQEILLIPRSCYFLLCLKGFLPVKVAALFADYLGILDFMTSFK 299
BLAST of EWM21882.1 vs. NCBI_GenBank
Match: gi|871264041|ref|XP_005108793.2| (PREDICTED: epidermal retinol dehydrogenase 2-like [Aplysia californica]) HSP 1 Score: 276.559 bits (706), Expect = 1.397e-87 Identity = 136/268 (50.75%), Postives = 183/268 (68.28%), Query Frame = 0
Query: 111 KSFRGETILITGGASGIGRLMALKFAAYENTTIIIWDLNEGAMKAVAREVEGIGARVFTYKVDVSKRERVYEVAKQMRKDVGKSVSVLVNNAGIVAGKPFLEGDDAYSLKTMEVNVIAHFWTIKAFLPAMVEANHGHIITVASTAGLVGVDGLADYCTSKAAAISFHEGIRTEVRRLKRPGIRMTLVNPYFIDTGMFTGAKTKAPILLPILQPEYVATSIIDAAEKNRNLLNLPRYTYILMVTNGV-PALVRDFIYDFMGIGENMADF 377
K +T+L+TG SGIGRLM+LKFA ++IWD+NE AR++E G++V Y VD+S +E +YE A +++ DVG +V VLVNNAGIV G+ FL+ D KTMEVN AHFWT K+FLP M+E NHGHI+T+AS+AGL GV LADYC SK A+ F E IR+E+ + ++ G+ T+V P+FI TGMF GAK++ P LLP+L+PEY A I+DA N+ +L PR Y+L GV P+ V D + +F+GI +M DF
Sbjct: 35 KDMSKDTVLVTGAGSGIGRLMSLKFAEM-GCRLVIWDINEEGNLETARQIEAKGSKVKAYTVDLSNKESIYETAAKVKADVG-NVDVLVNNAGIVTGRKFLDCPDGLVEKTMEVNTNAHFWTTKSFLPEMMERNHGHIVTIASSAGLFGVATLADYCASKFGAVGFDESIRSEMLKYRKTGVHTTVVCPFFIKTGMFEGAKSRFPWLLPLLEPEYAADKIMDAVRTNQPMLCAPRVLYLLYFLRGVFPSTVADVLAEFIGISASMDDF 300
BLAST of EWM21882.1 vs. NCBI_GenBank
Match: gi|700407378|ref|XP_009947609.1| (PREDICTED: epidermal retinol dehydrogenase 2 [Leptosomus discolor]) HSP 1 Score: 276.559 bits (706), Expect = 1.429e-87 Identity = 143/285 (50.18%), Postives = 198/285 (69.47%), Query Frame = 0
Query: 97 LLQVEYFDLLFPKRK-SFRGETILITGGASGIGRLMALKFAAYENTTIIIWDLNEGAMKAVAREVEGIGA-RVFTYKVDVSKRERVYEVAKQMRKDVGKSVSVLVNNAGIVAGKPFLEGDDAYSLKTMEVNVIAHFWTIKAFLPAMVEANHGHIITVASTAGLVGVDGLADYCTSKAAAISFHEGIRTEVRRLKRPGIRMTLVNPYFIDTGMFTGAKTKAPILLPILQPEYVATSIIDAAEKNRNLLNLPR-YTYILMVTNGVPALVRDFIYDFMGIGENMADFK 378
LLQ F L+ PKRK + GE +LITG SGIGRL++LKFA+ T+++WD+N+ +K ++ GA RV Y D SKR+ VY VA Q++K+VG VS+LVNNAGIV GK F++ D+ KTMEVN++AHFWT KAFLPAM+ +NHGH++++AS+AGLVGV+ L+DYC SK AA+ F E + E+R + + G++ T+V PYFI+TGMF G +T P LLP L+PEYVA II A +++ +L LPR ++IL N +P VR +++G+ M FK
Sbjct: 18 LLQSLVF-LVVPKRKKNVSGEIVLITGAGSGIGRLLSLKFASL-GATVVLWDINQEGLKETSQLARKNGAVRVHCYVCDCSKRQDVYRVADQVKKEVG-DVSILVNNAGIVTGKSFIDSPDSLVEKTMEVNLMAHFWTYKAFLPAMIASNHGHLVSIASSAGLVGVNRLSDYCASKFAAVGFAESVDLEMRDVGKTGVKTTIVCPYFINTGMFDGCRTIWPTLLPTLEPEYVAEKIITAIRRDQEILVLPRSLSFILAWKNILPVKVRVLFLNYLGVFRVMDSFK 299
BLAST of EWM21882.1 vs. NCBI_GenBank
Match: gi|694624578|ref|XP_009478346.1| (PREDICTED: epidermal retinol dehydrogenase 2 [Pelecanus crispus]) HSP 1 Score: 275.789 bits (704), Expect = 2.955e-87 Identity = 145/296 (48.99%), Postives = 199/296 (67.23%), Query Frame = 0
Query: 91 ILWSLVLLQVEYFDLLFPKRK-SFRGETILITGGASGIGRLMALKFAAYENTTIIIWDLNEGAMKAVAREVEGIGA-RVFTYKVDVSKRERVYEVAKQMRKDVGKSVSVLVNNAGIVAGKPFLEGDDAYSLKTMEVNVIAHFWTIKAFLPAMVEANHGHIITVASTAGLVGVDGLADYCTSKAAAISFHEGIRTEVRRLKRPGIRMTLVNPYFIDTGMFTGAKTKAPILLPILQPEYVATSIIDAAEKNRNLLNLPRYTYIL-MVTNGVPALVRDFIYDFMGIGENMADFKQTRTK 383
IL SLV L V P+RK + GE +LITG SGIGRL++LKFA+ T+++WD+N+ +K +R GA RV Y D SKR+ +Y VA Q++K+VG VS+L+NNAGIV GK F++ D+ KTMEVN++AHFWT +AFLPAM+ +NHGH++++AS AGL G L DYC SK AA+ F E + E+R L++ G++ T+V P FI+TGMF G +TK P LLPIL+PEYVA II A +++ +L LPR Y+L + N VPA V+ + ++G+ NM FK K
Sbjct: 18 ILESLVFLVV-------PRRKKNVSGEIVLITGAGSGIGRLLSLKFASL-GATVVLWDINQEGLKETSRLARENGAGRVHCYICDCSKRQDIYRVADQVKKEVG-DVSILINNAGIVTGKKFVDSPDSLMEKTMEVNIMAHFWTYRAFLPAMMASNHGHLVSIASLAGLSGFSHLTDYCASKFAAVGFAEAVDAEMRGLEKTGVKTTIVCPSFINTGMFDGCRTKWPRLLPILEPEYVAEKIITAIRQDQKMLLLPRCPYLLYALRNIVPAKVQALLEVYLGVLHNMDSFKGQAKK 304 The following BLAST results are available for this feature:
BLAST of EWM21882.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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