EWM21887.1, cds8791 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21887.1 vs. NCBI_GenBank
Match: gi|585102231|gb|EWM21887.1| (flagellar associated protein [Nannochloropsis gaditana]) HSP 1 Score: 484.952 bits (1247), Expect = 3.343e-173 Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0
Query: 1 MPAYAHLPLAMAKTSVNNMAEDKIITSYKGIFPATPSFGFGSSPRDTIAPSHSGNDTPGPGAYNLKSTLSGHVADSRIRSTNGFSLRGREGFGSKIFTKDRACVDEPGPGAYLSSQSRKGGLLSNPKHRAAPQFSFPKGCSPRNKLSIQPGPGHYHFKDTLGPQVLSSRASPPVSTFGKGRKRQSFTSDLTPDLTSSGGGPGFYNAVSACGKQVDSRKRNGGGVRFGKAEGPSTSVKRKNF 241
MPAYAHLPLAMAKTSVNNMAEDKIITSYKGIFPATPSFGFGSSPRDTIAPSHSGNDTPGPGAYNLKSTLSGHVADSRIRSTNGFSLRGREGFGSKIFTKDRACVDEPGPGAYLSSQSRKGGLLSNPKHRAAPQFSFPKGCSPRNKLSIQPGPGHYHFKDTLGPQVLSSRASPPVSTFGKGRKRQSFTSDLTPDLTSSGGGPGFYNAVSACGKQVDSRKRNGGGVRFGKAEGPSTSVKRKNF
Sbjct: 1 MPAYAHLPLAMAKTSVNNMAEDKIITSYKGIFPATPSFGFGSSPRDTIAPSHSGNDTPGPGAYNLKSTLSGHVADSRIRSTNGFSLRGREGFGSKIFTKDRACVDEPGPGAYLSSQSRKGGLLSNPKHRAAPQFSFPKGCSPRNKLSIQPGPGHYHFKDTLGPQVLSSRASPPVSTFGKGRKRQSFTSDLTPDLTSSGGGPGFYNAVSACGKQVDSRKRNGGGVRFGKAEGPSTSVKRKNF 241
BLAST of EWM21887.1 vs. NCBI_GenBank
Match: gi|676394599|ref|XP_009040577.1| (hypothetical protein AURANDRAFT_66990 [Aureococcus anophagefferens] >gi|323448768|gb|EGB04662.1| hypothetical protein AURANDRAFT_66990 [Aureococcus anophagefferens]) HSP 1 Score: 112.079 bits (279), Expect = 1.650e-25 Identity = 80/206 (38.83%), Postives = 112/206 (54.37%), Query Frame = 0
Query: 40 FGSSPRDTIAPSHSGNDTPGPGAYNLKSTLSGHVADSRIRSTNGFSLRGREGFGSKIF-TKDRACVDEPGPGAYLSSQSRKGGLLSNPKHRAAPQFSFPKGCSPRNKLSIQPGPGHYHFKDTLGPQVLSSRASPPVSTFGKGRKRQSFTSDLTPDL--TSSGGGPGFYNA-VSACGKQVDSRKRNGGGVRFGK-AEGPSTSVKRKN 240
FGS+ R ++ TPG GAY++K+T+ G+V DS+I S FSLR RE FG+ + D +PGPG Y Q NPK AP++SFPKG ++K + PGPG Y ++G QVLS++++ FG+G + P L + GPG Y +SAC KQVDSRK+ G V+F + A +TS K+
Sbjct: 95 FGSAIRPRLS---EAEPTPGAGAYSIKTTILGNVPDSKIHSAPQFSLRSREKFGNPMLRALDTETARQPGPGWYTPKQV-------NPKDDNAPKYSFPKGHFIKDKARLSPGPGAYVIPSSVGKQVLSTKSNNNGMGFGQGER---------PPLLRVHNDVGPGEYGVGISACKKQVDSRKKTSGFVKFSRCARDKATSTSAKD 281
BLAST of EWM21887.1 vs. NCBI_GenBank
Match: gi|299117604|emb|CBN75446.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 108.227 bits (269), Expect = 1.450e-24 Identity = 84/229 (36.68%), Postives = 117/229 (51.09%), Query Frame = 0
Query: 6 HLPLAMAKTSVNNMAEDK-IITSYKGIFPATPSFGFGSSPRDTIAPSHSGNDTPGPGAYNLKSTLSGHVADSRIRSTNGFSLRGREGFGS-KIFTKDRACVDEPGPGAYLSSQSRKGGLLSNPKHRAAPQFSFPK--GCSPRNKLSIQPGPGHYHFKDTLGPQVLSSRASPPVSTFGKGRKRQSFTSDLTPDLTSSGGGPGFYNAVSACG-KQVDSRKRNGGGVRFGKA 229
+LP A S + + + ++ SY + P GFG++ R + G + PGPGAY LKST+ + S IRS F++RGRE FGS + DR C EPGPG Y + + NP+ AP+++FPK G R + PGPG Y+ +G QVLS++ S FG G R T D+ GPG Y+ + G +QVDSR+ N G +F KA
Sbjct: 22 YLPAATKSKSSDILKMRRTLMDSYNETVRSAPKIGFGTAGRPPL--QDGGAEAPGPGAYQLKSTMFVN-PSSMIRSPPSFTMRGREKFGSPDLKAIDRTCQLEPGPGHYKLA-------IVNPQEENAPKYTFPKDAGAMIRENVVRAPGPGRYNLHPGVGKQVLSTKRSHNGVGFGTG-NRPDLLVQSTADV-----GPGEYSIPGSTGERQVDSRRCNKSGAKFSKA 234
BLAST of EWM21887.1 vs. NCBI_GenBank
Match: gi|635363618|emb|CCI47866.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 83.5741 bits (205), Expect = 1.378e-15 Identity = 76/202 (37.62%), Postives = 101/202 (50.00%), Query Frame = 0
Query: 40 FGSSPRDTIAPSHSGNDTPGPGAYNLKSTLSGHVADSRIRSTNGFSLRGREGFGSKIFTKDRACVDEPGPGAYLSSQSRKGGLLSNPKHRAAPQFSFPKGCSPRNKLSIQ-PGPGHYHFKDTLGPQVLSSRASPPVSTFGKGRKRQSFTSDLTPDLTSSGGGPGFYN-AVSACGKQVDSRKRNGGGVRFGKAEGPSTSVKRK 239
FGSSPR PS+ G +PGPG+Y + STL G S I+ SL GR+ FGS I K A PGPG Y S + N + + AP+FS K S + + PGPG Y +++GP LS++ S P S F +G +R T + TPD+ GPG Y V++ GKQ S FG E TS ++
Sbjct: 50 FGSSPRP--KPSN-GAKSPGPGSYQIPSTL-GKAVLSTIQQAPSCSLSGRDKFGSAIDIKLAA--SSPGPGDYSSK-------VVNLREQNAPKFSLGKKWSSNADANKKVPGPGAYEASNSIGPTFLSTQKSNPASAFPRG-ERTPLTPNSTPDV-----GPGQYGVVVTSVGKQTISTLSTPASFSFGTQERSKTSKTKE 232
BLAST of EWM21887.1 vs. NCBI_GenBank
Match: gi|325185193|emb|CCA19683.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 83.5741 bits (205), Expect = 1.572e-15 Identity = 73/193 (37.82%), Postives = 96/193 (49.74%), Query Frame = 0
Query: 40 FGSSPRDTIAPSHSGNDTPGPGAYNLKSTLSGHVADSRIRSTNGFSLRGREGFGSKIFTKDRACVDEPGPGAYLSSQSRKGGLLSNPKHRAAPQFSF-PKGCSPRNKLSIQPGPGHYHFKDTLGPQVLSSRASPPVSTFGKGRKRQSFTSDLTPDLTSSGGGPGFYNAV-SACGKQVDSRKRNGGGVRFGKAE 230
FGSSPR PS+ +PGPG+Y + STL G S ++ SL GR+ FGS I K+ A PGPG Y S + N + + AP+FS K S + PGPG Y + +GP LS++ S P S F +G +R S T + TPD+ GPG Y V ++ GKQ S FG E
Sbjct: 50 FGSSPRP--KPSNDAK-SPGPGSYQIPSTL-GKAVLSTVQQAPSCSLSGRDKFGSAIDVKNAA--SSPGPGDYTSK-------VVNLREQNAPKFSLGKKWNSSADSNKKGPGPGAYETANCIGPTFLSTQKSNPASAFPRG-ERTSLTQNNTPDV-----GPGQYGVVLTSVGKQTISTLSTPASFSFGTQE 223
BLAST of EWM21887.1 vs. NCBI_GenBank
Match: gi|970617821|gb|KUF65898.1| (Outer dense fiber protein 3 [Phytophthora nicotianae] >gi|970662068|gb|KUF99486.1| hypothetical protein AM588_10010909 [Phytophthora nicotianae] >gi|970664069|gb|KUG01091.1| Outer dense fiber protein 3 [Phytophthora nicotianae]) HSP 1 Score: 82.8037 bits (203), Expect = 1.661e-15 Identity = 75/204 (36.76%), Postives = 99/204 (48.53%), Query Frame = 0
Query: 25 ITSYKGIFPATPSFGFGSSPRDTIAPSHSGNDTPGPGAYNLKSTLSGHVADSRIRSTNGFSLRGREGFGSKIFTKDRACVDEPGPGAYLSSQSRKGGLLSNPKHRAAPQFSFPKGCSPRNKLSIQPGPGHYHFKDTLGPQVLSSRASPPVSTFGKGRKRQSFTSDLTPDLTSSGGGPGFYN-AVSACGKQVDSRKRNGGGVRFG 227
+ S K P T FG G+ PR +H+G+ +PGPGAY + S++ G S + S+ GRE FGS K A PGPG Y + + NP+ RAAP +S K SP PGPG Y T+G VLS++ S PVS+F K ++ TS T D+ GPG Y V A G+Q S + FG
Sbjct: 13 VDSRKATAPYT-VFGSGTRPR-----THNGSKSPGPGAYQIPSSI-GKPVLSTMAQAPSCSISGREKFGSTADLKTSAKF--PGPGDYSTH-------IVNPRERAAPSYSLGKKWSPMAGDKKFPGPGAYESSPTIGRTVLSTQKSNPVSSFPKVERKPLHTSS-TADV-----GPGQYGVVVEAVGRQAISTVSSAASFSFG 194
BLAST of EWM21887.1 vs. NCBI_GenBank
Match: gi|301107694|ref|XP_002902929.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262098047|gb|EEY56099.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 83.1889 bits (204), Expect = 1.765e-15 Identity = 75/223 (33.63%), Postives = 104/223 (46.64%), Query Frame = 0
Query: 6 HLPLAMAKTSVNNMAEDKIITSYKGIFPATPSFGFGSSPRDTIAPSHSGNDTPGPGAYNLKSTLSGHVADSRIRSTNGFSLRGREGFGSKIFTKDRACVDEPGPGAYLSSQSRKGGLLSNPKHRAAPQFSFPKGCSPRNKLSIQPGPGHYHFKDTLGPQVLSSRASPPVSTFGKGRKRQSFTSDLTPDLTSSGGGPGFYN-AVSACGKQVDSRKRNGGGVRFG 227
H K+SV + + T+ +F G G+ PR +H+G+ +PGPGAY + S++ G S + S+ GRE FGS K A PGPG Y + + NP+ RAAP +S K SP PGPG Y T+G VLS++ S PVS+F K +R+ + T D+ GPG Y V A G+Q S + FG
Sbjct: 21 HQAFTDIKSSVGEQVDSRKTTAPYTVF------GSGTRPR-----THNGSKSPGPGAYQIPSSI-GKPVLSTMAMAPSCSISGREKFGSTADLKTSAKF--PGPGDYNTH-------IVNPRERAAPSYSLGKKWSPMAGDKKFPGPGAYESSPTIGRTVLSTQKSNPVSSFPK-VERKPLNASSTADV-----GPGQYGVVVEAVGRQTVSTVHSAAAFSFG 216
BLAST of EWM21887.1 vs. NCBI_GenBank
Match: gi|570312258|gb|ETO60206.1| (hypothetical protein F444_21562 [Phytophthora parasitica P1976]) HSP 1 Score: 82.8037 bits (203), Expect = 2.384e-15 Identity = 75/204 (36.76%), Postives = 99/204 (48.53%), Query Frame = 0
Query: 25 ITSYKGIFPATPSFGFGSSPRDTIAPSHSGNDTPGPGAYNLKSTLSGHVADSRIRSTNGFSLRGREGFGSKIFTKDRACVDEPGPGAYLSSQSRKGGLLSNPKHRAAPQFSFPKGCSPRNKLSIQPGPGHYHFKDTLGPQVLSSRASPPVSTFGKGRKRQSFTSDLTPDLTSSGGGPGFYN-AVSACGKQVDSRKRNGGGVRFG 227
+ S K P T FG G+ PR +H+G+ +PGPGAY + S++ G S + S+ GRE FGS K A PGPG Y + + NP+ RAAP +S K SP PGPG Y T+G VLS++ S PVS+F K ++ TS T D+ GPG Y V A G+Q S + FG
Sbjct: 34 VDSRKATAPYT-VFGSGTRPR-----THNGSKSPGPGAYQIPSSI-GKPVLSTMAQAPSCSISGREKFGSTADLKTSAKF--PGPGDYSTH-------IVNPRERAAPSYSLGKKWSPMAGDKKFPGPGAYESSPTIGRTVLSTQKSNPVSSFPKVERKPLHTSS-TADV-----GPGQYGVVVEAVGRQAISTVSSAASFSFG 215
BLAST of EWM21887.1 vs. NCBI_GenBank
Match: gi|675179081|ref|XP_008898425.1| (hypothetical protein PPTG_06276 [Phytophthora parasitica INRA-310] >gi|566008569|gb|ETI31480.1| hypothetical protein F443_21547 [Phytophthora parasitica P1569] >gi|567946065|gb|ETK71876.1| hypothetical protein L915_20944 [Phytophthora parasitica] >gi|567974723|gb|ETL25305.1| hypothetical protein L916_20826 [Phytophthora parasitica] >gi|568004200|gb|ETL78529.1| hypothetical protein L917_20676 [Phytophthora parasitica] >gi|568034106|gb|ETM31786.1| hypothetical protein L914_20693 [Phytophthora parasitica] >gi|568101359|gb|ETN16045.1| hypothetical protein PPTG_06276 [Phytophthora parasitica INRA-310] >gi|570936038|gb|ETP01295.1| hypothetical protein F441_21431 [Phytophthora parasitica CJ01A1] >gi|570966335|gb|ETP29454.1| hypothetical protein F442_21388 [Phytophthora parasitica P10297]) HSP 1 Score: 82.8037 bits (203), Expect = 2.384e-15 Identity = 75/204 (36.76%), Postives = 99/204 (48.53%), Query Frame = 0
Query: 25 ITSYKGIFPATPSFGFGSSPRDTIAPSHSGNDTPGPGAYNLKSTLSGHVADSRIRSTNGFSLRGREGFGSKIFTKDRACVDEPGPGAYLSSQSRKGGLLSNPKHRAAPQFSFPKGCSPRNKLSIQPGPGHYHFKDTLGPQVLSSRASPPVSTFGKGRKRQSFTSDLTPDLTSSGGGPGFYN-AVSACGKQVDSRKRNGGGVRFG 227
+ S K P T FG G+ PR +H+G+ +PGPGAY + S++ G S + S+ GRE FGS K A PGPG Y + + NP+ RAAP +S K SP PGPG Y T+G VLS++ S PVS+F K ++ TS T D+ GPG Y V A G+Q S + FG
Sbjct: 34 VDSRKATAPYT-VFGSGTRPR-----THNGSKSPGPGAYQIPSSI-GKPVLSTMAQAPSCSISGREKFGSTADLKTSAKF--PGPGDYSTH-------IVNPRERAAPSYSLGKKWSPMAGDKKFPGPGAYESSPTIGRTVLSTQKSNPVSSFPKVERKPLHTSS-TADV-----GPGQYGVVVEAVGRQAISTVSSAASFSFG 215
BLAST of EWM21887.1 vs. NCBI_GenBank
Match: gi|695442682|ref|XP_009533515.1| (hypothetical protein PHYSODRAFT_347554 [Phytophthora sojae] >gi|348670949|gb|EGZ10770.1| hypothetical protein PHYSODRAFT_347554 [Phytophthora sojae]) HSP 1 Score: 81.6481 bits (200), Expect = 1.149e-14 Identity = 75/225 (33.33%), Postives = 110/225 (48.89%), Query Frame = 0
Query: 8 PLAMAKTSVNNMAEDKIITSYKGIFPATPSFGFGSSPRDTIAPSHSGNDTPGPGAYNLKSTLSGHVADSRIRSTNGFSLRGREGFGSKIFTKD-RACVDEPGPGAYLSSQSRKGGLLSNPKHRAAPQFSFPKGCSPRNKLSIQPGPGHYHFKDTLGPQVLSSRASPPVSTFGKGRK---RQSFTSDLTPDLTSSGGGPGFYN-AVSACGKQVDSRKRNGGGVRFG 227
P+ A T + + +++ S K P T FG G+ PR T +G+ +PGPGAY + S++ V + +++ S+ GRE FGS T D + PGPG Y ++ + NP+ RAAP +S K SP PGPG Y T+G VLS++ + P+S+F K + R S T+D+ GPG Y V A G+Q S + FG
Sbjct: 46 PVHQAFTDIKSSCGEQV-DSRKVTAPVT-VFGSGTRPRTT-----NGSKSPGPGAYQIPSSIGKPVLSTMVQAP-ACSISGREKFGS---TSDLKLSAKFPGPGDYTTA-------IVNPRERAAPSYSLGKKWSPMPGQKKFPGPGAYETTPTIGRTVLSTQKTNPMSSFPKVERKPLRTSSTADV---------GPGQYAVVVEAVGRQAVSTLTSAAAYSFG 243 The following BLAST results are available for this feature:
BLAST of EWM21887.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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