EWM21873.1, cds8790 (CDS) Nannochloropsis gaditana

Overview
NameEWM21873.1
Unique Namecds8790
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:247011..247895 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21873.1
Productsam-dependent methyltransferase
Orig transcript idgnl|cribi|Naga_100159g12.6551.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:247011..247895 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0016429tRNA (adenine-N1-)-methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR006901TrmK
Homology
BLAST of EWM21873.1 vs. NCBI_GenBank
Match: gi|585102217|gb|EWM21873.1| (sam-dependent methyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 613.224 bits (1580), Expect = 0.000e+0
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0
Query:    1 MGWTGLLMPLKTAIAAFAFQKQASQSSTILQKLGPRLSAVYRLVPSHAKGIVDVGCDHALLGLALAAGRDHPNLRKVIGIDKALDPLDVARQNLREHAYSRIEKYPLTASLELRHGDGLEALIPEDVNLVDTLCMAGLGSGTIIEVLSSLKYVREGAKFEYLVLQPFDSRPHYVNEVRDCVKSQGFSIQQERIDYVNSRWFVTMAASVNANKADKAGQCEKVRYNSTCMLGDALMRLAREDRRTHQIYADYLCHHRDWYASICKARNTRMPPEHDYVSQFLRAIEQEISALRVH 294
            MGWTGLLMPLKTAIAAFAFQKQASQSSTILQKLGPRLSAVYRLVPSHAKGIVDVGCDHALLGLALAAGRDHPNLRKVIGIDKALDPLDVARQNLREHAYSRIEKYPLTASLELRHGDGLEALIPEDVNLVDTLCMAGLGSGTIIEVLSSLKYVREGAKFEYLVLQPFDSRPHYVNEVRDCVKSQGFSIQQERIDYVNSRWFVTMAASVNANKADKAGQCEKVRYNSTCMLGDALMRLAREDRRTHQIYADYLCHHRDWYASICKARNTRMPPEHDYVSQFLRAIEQEISALRVH
Sbjct:    1 MGWTGLLMPLKTAIAAFAFQKQASQSSTILQKLGPRLSAVYRLVPSHAKGIVDVGCDHALLGLALAAGRDHPNLRKVIGIDKALDPLDVARQNLREHAYSRIEKYPLTASLELRHGDGLEALIPEDVNLVDTLCMAGLGSGTIIEVLSSLKYVREGAKFEYLVLQPFDSRPHYVNEVRDCVKSQGFSIQQERIDYVNSRWFVTMAASVNANKADKAGQCEKVRYNSTCMLGDALMRLAREDRRTHQIYADYLCHHRDWYASICKARNTRMPPEHDYVSQFLRAIEQEISALRVH 294          
BLAST of EWM21873.1 vs. NCBI_GenBank
Match: gi|1210527805|dbj|GAX13501.1| (hypothetical protein FisN_UnNu043 [Fistulifera solaris])

HSP 1 Score: 74.3294 bits (181), Expect = 5.785e-12
Identity = 54/174 (31.03%), Postives = 89/174 (51.15%), Query Frame = 0
Query:   33 LGPRLSAVYRLVPSHAKGIV---DVGCDHALLGLALAAGRDHPNLRKVIGIDKALDPLDVARQNLREHAYSRIEKYPLTASLELRHGDGLEALIPEDVNLVDTLCMAGLGSGTIIEVLSSLKYVREGAKFEYLVLQPFDSRPHYVNEVRDCVKSQGFSIQQERIDYVNSRWFVT 203
            L PRL  V+ L  S    ++   D+G DH LL   L       + + VIG+DK+          L+  A SR        +++ R G+GL+ L   + ++V   C+AG+G  T+ E+L    +  E    ++LVLQP +SRP ++  + + V+  G+S++ E I Y   RW++T
Sbjct:   21 LPPRLQHVFDLAVSCGNDVLSVADIGTDHGLLASELTK-----HFQSVIGVDKS-------EHALQGGALSRDNA---GRNVDFRVGNGLQTLRRGEADVV---CIAGMGVHTMCEILD--PHSLETIDTQHLVLQPTNSRPKHLMLLYEFVEGHGWSVEDECILYTQGRWYIT 174          
BLAST of EWM21873.1 vs. NCBI_GenBank
Match: gi|556500437|ref|WP_023348105.1| (hypothetical protein [Firmicutes bacterium ASF500] >gi|554968620|gb|ESL13421.1| hypothetical protein N510_02411 [Firmicutes bacterium ASF500])

HSP 1 Score: 73.559 bits (179), Expect = 9.054e-12
Identity = 58/161 (36.02%), Postives = 78/161 (48.45%), Query Frame = 0
Query:   33 LGPRLSAVYRLVPSHAKGIVDVGCDHALLGLALAAGRDHPNLRKVIGIDKALDPLDVARQNLREHAYSRIEKYPLTASLELRHGDGLEALIPEDVNLVDTLCMAGLGSGTIIEVLSSLKYVREGAKFEYLVLQPFDSRPHYVNEVRDCVKSQGFSIQQERI 193
            L PRL     L P  A+ + DVG DHA L  AL      P     I  D    PLD AR  +RE          LT  +  R  DGL  + P +V   D + +AG+G  TI  +LS+  +VR G     L+LQP  S P    ++R  ++  GF+IQ+ER+
Sbjct:    6 LTPRLQMTADLAPEGAR-LADVGTDHAYLPAALILEGKIP---WAIAADLRQGPLDRARATVRECG--------LTGRVAFRLCDGLTGIQPGEV---DAVVIAGMGGETIAAILSAAPWVRTGDV--PLILQPMSSFP----DLRGWLQGNGFAIQEERL 145          
BLAST of EWM21873.1 vs. NCBI_GenBank
Match: gi|746146211|ref|WP_039208409.1| (hypothetical protein [Anaerovibrio lipolyticus] >gi|733797935|gb|KHM52027.1| hypothetical protein NZ47_07140 [Anaerovibrio lipolyticus] >gi|1109777561|emb|SHI35151.1| tRNA (adenine22-N1)-methyltransferase [Anaerovibrio lipolyticus DSM 3074])

HSP 1 Score: 73.1738 bits (178), Expect = 1.159e-11
Identity = 66/233 (28.33%), Postives = 106/233 (45.49%), Query Frame = 0
Query:   33 LGPRLSAVYRLVPSHAKGIVDVGCDHALLGLALAAGRDHPNLRKVIGIDKALDPLDVARQNLREHAYSRIEKYPLTASLELRHGDGLEALIPEDVNLVDTLCMAGLGSGTIIEVLSSLKYVREGAKFEYLVLQPFDSRPHYVNEVRDCVKSQGFSIQQERIDYVNSRWFVTMAASVNANKADKAGQCEKVRYNSTCMLGDALMRLAREDRRTHQIYADYLCHHRDWYASICKA 265
            L  RL AV   VP  A  + D+G DH  L + L       + RKVI  D    P   AR+ + E  +S         S+E+R GDGL AL P +   VDT+C+AG+G     ++L +   V   AK + LVLQP +   +    +R  +    + I+ E++  V+ R +  + A             EK+      +LG  L+      ++  +++AD++ ++ D    I K 
Sbjct:    2 LDDRLQAVADFVPP-ASSVADIGTDHGYLAIELLKIN---STRKVIAADLNAGPCQAARRTISEAGFSD--------SIEVRQGDGLAALTPGE---VDTVCIAGMGGKLEADILEAQPDVT--AKLQCLVLQPQNGFEY----LRGWLYDHNWHIEDEKLSKVDGRVYQIIKAVQGK---------EKMLTEPELILGPVLI------KKRPELFADHVQNNIDQLDKIRKG 198          
BLAST of EWM21873.1 vs. NCBI_GenBank
Match: gi|524004172|emb|CCX89004.1| (putative uncharacterized protein [Clostridium sp. CAG:590])

HSP 1 Score: 73.1738 bits (178), Expect = 1.463e-11
Identity = 52/175 (29.71%), Postives = 89/175 (50.86%), Query Frame = 0
Query:   33 LGPRLSAVYRLVPSHAKGIVDVGCDHALLGLALAAGRDHPNLRKVIGIDKALDPLDVARQNLREHAYSRIEKYPLTASLELRHGDGLEALIPEDVNLVDTLCMAGLGSGTIIEVLSSLKYVREGAKFEYLVLQPFDSRPHYVNEVRDCVKSQGFSIQQERIDYVNSRWFVTMAAS 207
            L  R+ AV +++   +  I DVGCDHA + +AL   +     +KVI +D    PL +A +N        I  Y L  S+++R GDGLE L P +    DT+ +AG+G   + ++L   K +    +   L+LQP       ++ VR  +   G+ I++E +   + +++  M A+
Sbjct:    6 LSKRMEAVVKMISPQSFAIADVGCDHAYVSIAL---KLRGMAQKVIAMDVRKGPLAIAEKN--------IALYGLEESIDVRLGDGLEKLNPGE---ADTIVIAGMGGLLMRDILERGKRIWCEKEHPVLILQPQSD----LDVVRHFLYEHGYVIERENMLTEDGKYYTVMRAA 162          
BLAST of EWM21873.1 vs. NCBI_GenBank
Match: gi|1199637834|ref|WP_087370848.1| (hypothetical protein [Butyricicoccus pullicaecorum] >gi|1198672170|gb|OUP53656.1| hypothetical protein B5F17_03470 [Butyricicoccus pullicaecorum])

HSP 1 Score: 72.0182 bits (175), Expect = 3.227e-11
Identity = 61/204 (29.90%), Postives = 91/204 (44.61%), Query Frame = 0
Query:   33 LGPRLSAVYRLVPSHAKGIVDVGCDHALLGLALAAGRDHPNLRKVIGIDKALDPLDVARQNLREHAYSRIEKYPLTASLELRHGDGLEALIPEDVNLVDTLCMAGLGSGTIIEVLSSLKYVREGAKFEYLVLQPFDSRPHYVNEVRDCVKSQGFSIQQERIDYVNSRWFVTMAASVNANKADKAGQCEKVRYNSTCMLGDALMR 236
            L PRL A+   V   A+ + D+G DH  L L L        L   I  D    PLD AR N R H         LT  +  R   GLE + P++    DT+ +AG+G  TI  +L +  +  +G     L+LQP    P    ++R  + + G+ IQ+E +     R+++       A + DK  +         C+L DAL+R
Sbjct:   11 LTPRLQAIADRVSQGAR-LADIGTDHGHLPLWLLT---QNRLTCAIASDLREGPLDHARDNARFHG--------LTDRVSFRLASGLEGIAPDE---CDTISIAGMGGETIAAILEAAPWTADGK--HTLLLQPMTMLP----QLRQWLWAHGYCIQEETVCQEGHRYYLIWTVCGGAERQDKPLE--------ACVLSDALLR 185          
BLAST of EWM21873.1 vs. NCBI_GenBank
Match: gi|1081498094|emb|SCX91442.1| (tRNA (adenine22-N1)-methyltransferase [Blautia sp. SF-50])

HSP 1 Score: 72.0182 bits (175), Expect = 3.503e-11
Identity = 63/224 (28.12%), Postives = 100/224 (44.64%), Query Frame = 0
Query:   32 KLGPRLSAVYRLVPSHAKGIVDVGCDHALLGLALAAGRDHPNLRKVIGIDKALDPLDVARQNLREHAYSRIEKYPLTASLELRHGDGLEALIPEDVNLVDTLCMAGLGSGTIIEVLSSLKYVREGAKFEYLVLQPFDSRPHYVNEVRDCVKSQGFSIQQERIDYVNSRWFVTMAASVNANKADKAGQCEKVRYNSTCMLGDALMRLAREDRRTHQIYADYLCHH 255
            +L  RL A+  +V +    + DVGCDH  L + L + +  P+    I +D    PL  AR+N        I +Y L   +E R  DGL  L P +    DTL +AG+G   +  +L     VREG  F+ L+LQP    PH+    R  +   G+ I +E +   + +++  M A V  N  +K    E+  +    +L           ++ H +  +YL   
Sbjct:    9 QLSMRLRAIAGMV-TKGNRLADVGCDHGYLSIWLVSEKTVPS---AIAMDVRPGPLSRAREN--------ITRYGLEDYIETRLSDGLAKLEPGE---GDTLVIAGMGGPLMERILKDGAKVREG--FQELILQPQSDLPHF----RHFLSEIGWEIVREEMIKEDGKFYPMMKA-VRNNSGEKTVYTEEEAWFGPLLL-----------KKCHPVLKEYLLRE 199          
BLAST of EWM21873.1 vs. NCBI_GenBank
Match: gi|960365882|ref|WP_058258795.1| (hypothetical protein [Herbinix luporum] >gi|927442283|emb|CUH93559.1| hypothetical protein SD1D_2023 [Herbinix luporum])

HSP 1 Score: 72.0182 bits (175), Expect = 3.867e-11
Identity = 74/263 (28.14%), Postives = 124/263 (47.15%), Query Frame = 0
Query:   32 KLGPRLSAVYRLVPSHAKGIVDVGCDHALLGLALAAGRDHPNLRKVIGIDKALDPLDVARQNLREHAYSRIEKYPLTASLELRHGDGLEALIPEDVNLVDTLCMAGLGSGTIIEVLSSLKYVREGAKFEYLVLQPFDSRPHYVNEVRDCVKSQGFSIQQERIDYVNSRWFVTMAA-SVNANKADKAGQCEKVRYNSTCMLGDALMRLAREDRRTHQIYADYLCHHRDWYASICK---ARNTRMPPEHDY-VSQFLRAIEQEIS 289
            +L  RL AV  +V   ++ + D+GCDHA   + L   R  P    V+ +D    PLD A++N        I++Y +   + +R  DG++ L       VDT+ +AG+G   +I++L+    V   AK   L+LQP  S  H    VR  +K  G+ I +E +     +++V M    V+ N  DK  Q  K  +      G    RL  E+R  + +  ++L   R  Y +I K   +  T+   +  + ++ F+R I+  I+
Sbjct:    2 QLSKRLEAVASMVTPGSR-VADIGCDHAYTAIYLVKERISPF---VVAMDINQGPLDRAKEN--------IKRYGVEDKITIRKSDGIKEL---KAGEVDTILIAGMGGRLMIQILTGNINVVSAAK--ELILQP-QSEIHL---VRKTLKELGYIIIKESMLKEEGKYYVVMKLRKVSPNFKDKDYQLIKPEH---IYFG----RLLLEER--NPVLLEFLKAERKQYENIYKELISLPTKQSIQRQFEINNFIRLIDNAIN 234          
BLAST of EWM21873.1 vs. NCBI_GenBank
Match: gi|524728194|emb|CDE29191.1| (putative uncharacterized protein [Ruminococcus sp. CAG:90] >gi|1052847723|emb|SCH83702.1| tRNA (adenine(22)-N(1))-methyltransferase [uncultured Blautia sp.])

HSP 1 Score: 71.633 bits (174), Expect = 4.307e-11
Identity = 63/224 (28.12%), Postives = 100/224 (44.64%), Query Frame = 0
Query:   32 KLGPRLSAVYRLVPSHAKGIVDVGCDHALLGLALAAGRDHPNLRKVIGIDKALDPLDVARQNLREHAYSRIEKYPLTASLELRHGDGLEALIPEDVNLVDTLCMAGLGSGTIIEVLSSLKYVREGAKFEYLVLQPFDSRPHYVNEVRDCVKSQGFSIQQERIDYVNSRWFVTMAASVNANKADKAGQCEKVRYNSTCMLGDALMRLAREDRRTHQIYADYLCHH 255
            +L  RL A+  +V +    + DVGCDH  L + L + +  P+    I +D    PL  AR+N        I +Y L   +E R  DGL  L P +    DTL +AG+G   +  +L     VREG  F+ L+LQP    PH+    R  +   G+ I +E +   + +++  M A V  N  +K    E+  +    +L           ++ H +  +YL   
Sbjct:    9 QLSMRLRAIAGMV-TKGNRLADVGCDHGYLSIWLVSEKTVPS---AIAMDVRPGPLSRAREN--------ITRYGLEDYIETRLSDGLAKLEPGE---GDTLVIAGMGGPLMERILKDGAKVREG--FQELILQPQSDLPHF----RHFLSEIGWEIVREEMIKEDGKFYPMMKA-VRNNAGEKTVYTEEEAWFGPLLL-----------KKCHPVLKEYLLRE 199          
BLAST of EWM21873.1 vs. NCBI_GenBank
Match: gi|545412055|ref|WP_021651147.1| (hypothetical protein [Blautia sp. KLE 1732] >gi|542997372|gb|ERI92553.1| hypothetical protein HMPREF1547_02796 [Blautia sp. KLE 1732])

HSP 1 Score: 71.633 bits (174), Expect = 4.427e-11
Identity = 62/217 (28.57%), Postives = 98/217 (45.16%), Query Frame = 0
Query:   36 RLSAVYRLVPSHAKGIVDVGCDHALLGLALAAGRDHPNLRKVIGIDKALDPLDVARQNLREHAYSRIEKYPLTASLELRHGDGLEALIPEDVNLVDTLCMAGLGSGTIIEVLSSLKYVREGAKFEYLVLQPFDSRPHYVNEVRDCVKSQGFSIQQERIDYVNSRWFVTMAASVNANKADKAGQCEKVRYNSTCMLGDALMRLAREDRRTHQIYADYL 252
            RL A+  +V +    + DVGCDH  L + L + +  P+    I +D    PL  AR+N        I +Y L   +E R  DGL  L P +    DTL +AG+G   +  +L     VREG  F+ L+LQP    PH+    R  +   G+ I +E +   + +++  M A V  N  +K    E+  +    +L           ++ H +  +YL
Sbjct:    2 RLRAIAGMV-TKGNRLADVGCDHGYLSIWLVSEKTVPS---AIAMDVRPGPLSRAREN--------ITRYGLEDYIETRLSDGLAKLEPGE---GDTLAIAGMGGPLMERILKDGAKVREG--FQELILQPQSDLPHF----RHFLSEIGWEIVREEMIKEDGKFYPMMKA-VRNNSGEKTVYTEEEAWFGPLLL-----------KKCHPVLKEYL 185          
The following BLAST results are available for this feature:
BLAST of EWM21873.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102217|gb|EWM21873.1|0.000e+0100.00sam-dependent methyltransferase [Nannochloropsis g... [more]
gi|1210527805|dbj|GAX13501.1|5.785e-1231.03hypothetical protein FisN_UnNu043 [Fistulifera sol... [more]
gi|556500437|ref|WP_023348105.1|9.054e-1236.02hypothetical protein [Firmicutes bacterium ASF500]... [more]
gi|746146211|ref|WP_039208409.1|1.159e-1128.33hypothetical protein [Anaerovibrio lipolyticus] >g... [more]
gi|524004172|emb|CCX89004.1|1.463e-1129.71putative uncharacterized protein [Clostridium sp. ... [more]
gi|1199637834|ref|WP_087370848.1|3.227e-1129.90hypothetical protein [Butyricicoccus pullicaecorum... [more]
gi|1081498094|emb|SCX91442.1|3.503e-1128.13tRNA (adenine22-N1)-methyltransferase [Blautia sp.... [more]
gi|960365882|ref|WP_058258795.1|3.867e-1128.14hypothetical protein [Herbinix luporum] >gi|927442... [more]
gi|524728194|emb|CDE29191.1|4.307e-1128.13putative uncharacterized protein [Ruminococcus sp.... [more]
gi|545412055|ref|WP_021651147.1|4.427e-1128.57hypothetical protein [Blautia sp. KLE 1732] >gi|54... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8820rna8820Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications