EWM21873.1, cds8790 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21873.1 vs. NCBI_GenBank
Match: gi|585102217|gb|EWM21873.1| (sam-dependent methyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 613.224 bits (1580), Expect = 0.000e+0 Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0
Query: 1 MGWTGLLMPLKTAIAAFAFQKQASQSSTILQKLGPRLSAVYRLVPSHAKGIVDVGCDHALLGLALAAGRDHPNLRKVIGIDKALDPLDVARQNLREHAYSRIEKYPLTASLELRHGDGLEALIPEDVNLVDTLCMAGLGSGTIIEVLSSLKYVREGAKFEYLVLQPFDSRPHYVNEVRDCVKSQGFSIQQERIDYVNSRWFVTMAASVNANKADKAGQCEKVRYNSTCMLGDALMRLAREDRRTHQIYADYLCHHRDWYASICKARNTRMPPEHDYVSQFLRAIEQEISALRVH 294
MGWTGLLMPLKTAIAAFAFQKQASQSSTILQKLGPRLSAVYRLVPSHAKGIVDVGCDHALLGLALAAGRDHPNLRKVIGIDKALDPLDVARQNLREHAYSRIEKYPLTASLELRHGDGLEALIPEDVNLVDTLCMAGLGSGTIIEVLSSLKYVREGAKFEYLVLQPFDSRPHYVNEVRDCVKSQGFSIQQERIDYVNSRWFVTMAASVNANKADKAGQCEKVRYNSTCMLGDALMRLAREDRRTHQIYADYLCHHRDWYASICKARNTRMPPEHDYVSQFLRAIEQEISALRVH
Sbjct: 1 MGWTGLLMPLKTAIAAFAFQKQASQSSTILQKLGPRLSAVYRLVPSHAKGIVDVGCDHALLGLALAAGRDHPNLRKVIGIDKALDPLDVARQNLREHAYSRIEKYPLTASLELRHGDGLEALIPEDVNLVDTLCMAGLGSGTIIEVLSSLKYVREGAKFEYLVLQPFDSRPHYVNEVRDCVKSQGFSIQQERIDYVNSRWFVTMAASVNANKADKAGQCEKVRYNSTCMLGDALMRLAREDRRTHQIYADYLCHHRDWYASICKARNTRMPPEHDYVSQFLRAIEQEISALRVH 294
BLAST of EWM21873.1 vs. NCBI_GenBank
Match: gi|1210527805|dbj|GAX13501.1| (hypothetical protein FisN_UnNu043 [Fistulifera solaris]) HSP 1 Score: 74.3294 bits (181), Expect = 5.785e-12 Identity = 54/174 (31.03%), Postives = 89/174 (51.15%), Query Frame = 0
Query: 33 LGPRLSAVYRLVPSHAKGIV---DVGCDHALLGLALAAGRDHPNLRKVIGIDKALDPLDVARQNLREHAYSRIEKYPLTASLELRHGDGLEALIPEDVNLVDTLCMAGLGSGTIIEVLSSLKYVREGAKFEYLVLQPFDSRPHYVNEVRDCVKSQGFSIQQERIDYVNSRWFVT 203
L PRL V+ L S ++ D+G DH LL L + + VIG+DK+ L+ A SR +++ R G+GL+ L + ++V C+AG+G T+ E+L + E ++LVLQP +SRP ++ + + V+ G+S++ E I Y RW++T
Sbjct: 21 LPPRLQHVFDLAVSCGNDVLSVADIGTDHGLLASELTK-----HFQSVIGVDKS-------EHALQGGALSRDNA---GRNVDFRVGNGLQTLRRGEADVV---CIAGMGVHTMCEILD--PHSLETIDTQHLVLQPTNSRPKHLMLLYEFVEGHGWSVEDECILYTQGRWYIT 174
BLAST of EWM21873.1 vs. NCBI_GenBank
Match: gi|556500437|ref|WP_023348105.1| (hypothetical protein [Firmicutes bacterium ASF500] >gi|554968620|gb|ESL13421.1| hypothetical protein N510_02411 [Firmicutes bacterium ASF500]) HSP 1 Score: 73.559 bits (179), Expect = 9.054e-12 Identity = 58/161 (36.02%), Postives = 78/161 (48.45%), Query Frame = 0
Query: 33 LGPRLSAVYRLVPSHAKGIVDVGCDHALLGLALAAGRDHPNLRKVIGIDKALDPLDVARQNLREHAYSRIEKYPLTASLELRHGDGLEALIPEDVNLVDTLCMAGLGSGTIIEVLSSLKYVREGAKFEYLVLQPFDSRPHYVNEVRDCVKSQGFSIQQERI 193
L PRL L P A+ + DVG DHA L AL P I D PLD AR +RE LT + R DGL + P +V D + +AG+G TI +LS+ +VR G L+LQP S P ++R ++ GF+IQ+ER+
Sbjct: 6 LTPRLQMTADLAPEGAR-LADVGTDHAYLPAALILEGKIP---WAIAADLRQGPLDRARATVRECG--------LTGRVAFRLCDGLTGIQPGEV---DAVVIAGMGGETIAAILSAAPWVRTGDV--PLILQPMSSFP----DLRGWLQGNGFAIQEERL 145
BLAST of EWM21873.1 vs. NCBI_GenBank
Match: gi|746146211|ref|WP_039208409.1| (hypothetical protein [Anaerovibrio lipolyticus] >gi|733797935|gb|KHM52027.1| hypothetical protein NZ47_07140 [Anaerovibrio lipolyticus] >gi|1109777561|emb|SHI35151.1| tRNA (adenine22-N1)-methyltransferase [Anaerovibrio lipolyticus DSM 3074]) HSP 1 Score: 73.1738 bits (178), Expect = 1.159e-11 Identity = 66/233 (28.33%), Postives = 106/233 (45.49%), Query Frame = 0
Query: 33 LGPRLSAVYRLVPSHAKGIVDVGCDHALLGLALAAGRDHPNLRKVIGIDKALDPLDVARQNLREHAYSRIEKYPLTASLELRHGDGLEALIPEDVNLVDTLCMAGLGSGTIIEVLSSLKYVREGAKFEYLVLQPFDSRPHYVNEVRDCVKSQGFSIQQERIDYVNSRWFVTMAASVNANKADKAGQCEKVRYNSTCMLGDALMRLAREDRRTHQIYADYLCHHRDWYASICKA 265
L RL AV VP A + D+G DH L + L + RKVI D P AR+ + E +S S+E+R GDGL AL P + VDT+C+AG+G ++L + V AK + LVLQP + + +R + + I+ E++ V+ R + + A EK+ +LG L+ ++ +++AD++ ++ D I K
Sbjct: 2 LDDRLQAVADFVPP-ASSVADIGTDHGYLAIELLKIN---STRKVIAADLNAGPCQAARRTISEAGFSD--------SIEVRQGDGLAALTPGE---VDTVCIAGMGGKLEADILEAQPDVT--AKLQCLVLQPQNGFEY----LRGWLYDHNWHIEDEKLSKVDGRVYQIIKAVQGK---------EKMLTEPELILGPVLI------KKRPELFADHVQNNIDQLDKIRKG 198
BLAST of EWM21873.1 vs. NCBI_GenBank
Match: gi|524004172|emb|CCX89004.1| (putative uncharacterized protein [Clostridium sp. CAG:590]) HSP 1 Score: 73.1738 bits (178), Expect = 1.463e-11 Identity = 52/175 (29.71%), Postives = 89/175 (50.86%), Query Frame = 0
Query: 33 LGPRLSAVYRLVPSHAKGIVDVGCDHALLGLALAAGRDHPNLRKVIGIDKALDPLDVARQNLREHAYSRIEKYPLTASLELRHGDGLEALIPEDVNLVDTLCMAGLGSGTIIEVLSSLKYVREGAKFEYLVLQPFDSRPHYVNEVRDCVKSQGFSIQQERIDYVNSRWFVTMAAS 207
L R+ AV +++ + I DVGCDHA + +AL + +KVI +D PL +A +N I Y L S+++R GDGLE L P + DT+ +AG+G + ++L K + + L+LQP ++ VR + G+ I++E + + +++ M A+
Sbjct: 6 LSKRMEAVVKMISPQSFAIADVGCDHAYVSIAL---KLRGMAQKVIAMDVRKGPLAIAEKN--------IALYGLEESIDVRLGDGLEKLNPGE---ADTIVIAGMGGLLMRDILERGKRIWCEKEHPVLILQPQSD----LDVVRHFLYEHGYVIERENMLTEDGKYYTVMRAA 162
BLAST of EWM21873.1 vs. NCBI_GenBank
Match: gi|1199637834|ref|WP_087370848.1| (hypothetical protein [Butyricicoccus pullicaecorum] >gi|1198672170|gb|OUP53656.1| hypothetical protein B5F17_03470 [Butyricicoccus pullicaecorum]) HSP 1 Score: 72.0182 bits (175), Expect = 3.227e-11 Identity = 61/204 (29.90%), Postives = 91/204 (44.61%), Query Frame = 0
Query: 33 LGPRLSAVYRLVPSHAKGIVDVGCDHALLGLALAAGRDHPNLRKVIGIDKALDPLDVARQNLREHAYSRIEKYPLTASLELRHGDGLEALIPEDVNLVDTLCMAGLGSGTIIEVLSSLKYVREGAKFEYLVLQPFDSRPHYVNEVRDCVKSQGFSIQQERIDYVNSRWFVTMAASVNANKADKAGQCEKVRYNSTCMLGDALMR 236
L PRL A+ V A+ + D+G DH L L L L I D PLD AR N R H LT + R GLE + P++ DT+ +AG+G TI +L + + +G L+LQP P ++R + + G+ IQ+E + R+++ A + DK + C+L DAL+R
Sbjct: 11 LTPRLQAIADRVSQGAR-LADIGTDHGHLPLWLLT---QNRLTCAIASDLREGPLDHARDNARFHG--------LTDRVSFRLASGLEGIAPDE---CDTISIAGMGGETIAAILEAAPWTADGK--HTLLLQPMTMLP----QLRQWLWAHGYCIQEETVCQEGHRYYLIWTVCGGAERQDKPLE--------ACVLSDALLR 185
BLAST of EWM21873.1 vs. NCBI_GenBank
Match: gi|1081498094|emb|SCX91442.1| (tRNA (adenine22-N1)-methyltransferase [Blautia sp. SF-50]) HSP 1 Score: 72.0182 bits (175), Expect = 3.503e-11 Identity = 63/224 (28.12%), Postives = 100/224 (44.64%), Query Frame = 0
Query: 32 KLGPRLSAVYRLVPSHAKGIVDVGCDHALLGLALAAGRDHPNLRKVIGIDKALDPLDVARQNLREHAYSRIEKYPLTASLELRHGDGLEALIPEDVNLVDTLCMAGLGSGTIIEVLSSLKYVREGAKFEYLVLQPFDSRPHYVNEVRDCVKSQGFSIQQERIDYVNSRWFVTMAASVNANKADKAGQCEKVRYNSTCMLGDALMRLAREDRRTHQIYADYLCHH 255
+L RL A+ +V + + DVGCDH L + L + + P+ I +D PL AR+N I +Y L +E R DGL L P + DTL +AG+G + +L VREG F+ L+LQP PH+ R + G+ I +E + + +++ M A V N +K E+ + +L ++ H + +YL
Sbjct: 9 QLSMRLRAIAGMV-TKGNRLADVGCDHGYLSIWLVSEKTVPS---AIAMDVRPGPLSRAREN--------ITRYGLEDYIETRLSDGLAKLEPGE---GDTLVIAGMGGPLMERILKDGAKVREG--FQELILQPQSDLPHF----RHFLSEIGWEIVREEMIKEDGKFYPMMKA-VRNNSGEKTVYTEEEAWFGPLLL-----------KKCHPVLKEYLLRE 199
BLAST of EWM21873.1 vs. NCBI_GenBank
Match: gi|960365882|ref|WP_058258795.1| (hypothetical protein [Herbinix luporum] >gi|927442283|emb|CUH93559.1| hypothetical protein SD1D_2023 [Herbinix luporum]) HSP 1 Score: 72.0182 bits (175), Expect = 3.867e-11 Identity = 74/263 (28.14%), Postives = 124/263 (47.15%), Query Frame = 0
Query: 32 KLGPRLSAVYRLVPSHAKGIVDVGCDHALLGLALAAGRDHPNLRKVIGIDKALDPLDVARQNLREHAYSRIEKYPLTASLELRHGDGLEALIPEDVNLVDTLCMAGLGSGTIIEVLSSLKYVREGAKFEYLVLQPFDSRPHYVNEVRDCVKSQGFSIQQERIDYVNSRWFVTMAA-SVNANKADKAGQCEKVRYNSTCMLGDALMRLAREDRRTHQIYADYLCHHRDWYASICK---ARNTRMPPEHDY-VSQFLRAIEQEIS 289
+L RL AV +V ++ + D+GCDHA + L R P V+ +D PLD A++N I++Y + + +R DG++ L VDT+ +AG+G +I++L+ V AK L+LQP S H VR +K G+ I +E + +++V M V+ N DK Q K + G RL E+R + + ++L R Y +I K + T+ + + ++ F+R I+ I+
Sbjct: 2 QLSKRLEAVASMVTPGSR-VADIGCDHAYTAIYLVKERISPF---VVAMDINQGPLDRAKEN--------IKRYGVEDKITIRKSDGIKEL---KAGEVDTILIAGMGGRLMIQILTGNINVVSAAK--ELILQP-QSEIHL---VRKTLKELGYIIIKESMLKEEGKYYVVMKLRKVSPNFKDKDYQLIKPEH---IYFG----RLLLEER--NPVLLEFLKAERKQYENIYKELISLPTKQSIQRQFEINNFIRLIDNAIN 234
BLAST of EWM21873.1 vs. NCBI_GenBank
Match: gi|524728194|emb|CDE29191.1| (putative uncharacterized protein [Ruminococcus sp. CAG:90] >gi|1052847723|emb|SCH83702.1| tRNA (adenine(22)-N(1))-methyltransferase [uncultured Blautia sp.]) HSP 1 Score: 71.633 bits (174), Expect = 4.307e-11 Identity = 63/224 (28.12%), Postives = 100/224 (44.64%), Query Frame = 0
Query: 32 KLGPRLSAVYRLVPSHAKGIVDVGCDHALLGLALAAGRDHPNLRKVIGIDKALDPLDVARQNLREHAYSRIEKYPLTASLELRHGDGLEALIPEDVNLVDTLCMAGLGSGTIIEVLSSLKYVREGAKFEYLVLQPFDSRPHYVNEVRDCVKSQGFSIQQERIDYVNSRWFVTMAASVNANKADKAGQCEKVRYNSTCMLGDALMRLAREDRRTHQIYADYLCHH 255
+L RL A+ +V + + DVGCDH L + L + + P+ I +D PL AR+N I +Y L +E R DGL L P + DTL +AG+G + +L VREG F+ L+LQP PH+ R + G+ I +E + + +++ M A V N +K E+ + +L ++ H + +YL
Sbjct: 9 QLSMRLRAIAGMV-TKGNRLADVGCDHGYLSIWLVSEKTVPS---AIAMDVRPGPLSRAREN--------ITRYGLEDYIETRLSDGLAKLEPGE---GDTLVIAGMGGPLMERILKDGAKVREG--FQELILQPQSDLPHF----RHFLSEIGWEIVREEMIKEDGKFYPMMKA-VRNNAGEKTVYTEEEAWFGPLLL-----------KKCHPVLKEYLLRE 199
BLAST of EWM21873.1 vs. NCBI_GenBank
Match: gi|545412055|ref|WP_021651147.1| (hypothetical protein [Blautia sp. KLE 1732] >gi|542997372|gb|ERI92553.1| hypothetical protein HMPREF1547_02796 [Blautia sp. KLE 1732]) HSP 1 Score: 71.633 bits (174), Expect = 4.427e-11 Identity = 62/217 (28.57%), Postives = 98/217 (45.16%), Query Frame = 0
Query: 36 RLSAVYRLVPSHAKGIVDVGCDHALLGLALAAGRDHPNLRKVIGIDKALDPLDVARQNLREHAYSRIEKYPLTASLELRHGDGLEALIPEDVNLVDTLCMAGLGSGTIIEVLSSLKYVREGAKFEYLVLQPFDSRPHYVNEVRDCVKSQGFSIQQERIDYVNSRWFVTMAASVNANKADKAGQCEKVRYNSTCMLGDALMRLAREDRRTHQIYADYL 252
RL A+ +V + + DVGCDH L + L + + P+ I +D PL AR+N I +Y L +E R DGL L P + DTL +AG+G + +L VREG F+ L+LQP PH+ R + G+ I +E + + +++ M A V N +K E+ + +L ++ H + +YL
Sbjct: 2 RLRAIAGMV-TKGNRLADVGCDHGYLSIWLVSEKTVPS---AIAMDVRPGPLSRAREN--------ITRYGLEDYIETRLSDGLAKLEPGE---GDTLAIAGMGGPLMERILKDGAKVREG--FQELILQPQSDLPHF----RHFLSEIGWEIVREEMIKEDGKFYPMMKA-VRNNSGEKTVYTEEEAWFGPLLL-----------KKCHPVLKEYL 185 The following BLAST results are available for this feature:
BLAST of EWM21873.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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