EWM21905.1, cds8773 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21905.1 vs. NCBI_GenBank
Match: gi|585102251|gb|EWM21905.1| (hypothetical protein Naga_100070g29 [Nannochloropsis gaditana]) HSP 1 Score: 779.63 bits (2012), Expect = 0.000e+0 Identity = 382/382 (100.00%), Postives = 382/382 (100.00%), Query Frame = 0
Query: 1 MAAVQGSIRGLETAPKFAYSRKGRPLCRLIVMYSCIALTRGFLMPAPRGSSALHSVPFREFARTEGKAASADPGAEFMRHGKGSSSEGAGNSTATRSRSKLPPMKETMQLLFSPDKRQVDQERARFREVIHTMQAAPMENVMGLISSNVPFFLGTNTSLFMQEMLEELDSMDPATPVPLGGGYQVTVEQQRTALVNLFTLTMDFIEGFVSHTQGELRSHQAVLKEIMEAAQKKSSAELDATLKRLRPQFREDFVTYLRGEYERVSTPPMTEDSVVLANLLQAIQARVLAEVEDMMGSDVSQVSRLLAFSDEEQVVTALRGSFLAGSLQPDQFLEMVETVLADLDERMPALLDSGNKDEELREMHRKLSAIRAFTVDYVAEMK 382
MAAVQGSIRGLETAPKFAYSRKGRPLCRLIVMYSCIALTRGFLMPAPRGSSALHSVPFREFARTEGKAASADPGAEFMRHGKGSSSEGAGNSTATRSRSKLPPMKETMQLLFSPDKRQVDQERARFREVIHTMQAAPMENVMGLISSNVPFFLGTNTSLFMQEMLEELDSMDPATPVPLGGGYQVTVEQQRTALVNLFTLTMDFIEGFVSHTQGELRSHQAVLKEIMEAAQKKSSAELDATLKRLRPQFREDFVTYLRGEYERVSTPPMTEDSVVLANLLQAIQARVLAEVEDMMGSDVSQVSRLLAFSDEEQVVTALRGSFLAGSLQPDQFLEMVETVLADLDERMPALLDSGNKDEELREMHRKLSAIRAFTVDYVAEMK
Sbjct: 1 MAAVQGSIRGLETAPKFAYSRKGRPLCRLIVMYSCIALTRGFLMPAPRGSSALHSVPFREFARTEGKAASADPGAEFMRHGKGSSSEGAGNSTATRSRSKLPPMKETMQLLFSPDKRQVDQERARFREVIHTMQAAPMENVMGLISSNVPFFLGTNTSLFMQEMLEELDSMDPATPVPLGGGYQVTVEQQRTALVNLFTLTMDFIEGFVSHTQGELRSHQAVLKEIMEAAQKKSSAELDATLKRLRPQFREDFVTYLRGEYERVSTPPMTEDSVVLANLLQAIQARVLAEVEDMMGSDVSQVSRLLAFSDEEQVVTALRGSFLAGSLQPDQFLEMVETVLADLDERMPALLDSGNKDEELREMHRKLSAIRAFTVDYVAEMK 382
BLAST of EWM21905.1 vs. NCBI_GenBank
Match: gi|298710081|emb|CBJ31797.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 65.855 bits (159), Expect = 3.896e-8 Identity = 66/275 (24.00%), Postives = 124/275 (45.09%), Query Frame = 0
Query: 66 GKAASADPGAEFMRHGKGSSSEGAGNSTATRSRSKLPPMKETMQLLFSPDKRQVDQERARFREVIHTMQAAPMENVM-GLISSNVPFFLGTNTSLFMQEMLEELDSMDPATPVPLGGGYQVTVEQQRTALVNLFTLTMDFIEGFVSHTQGELRSHQAVLKEIMEAAQKKSSAELDATLKRLRPQFREDFVTYLRGEYERV--------------STP------PMTEDSVVLANLLQAIQARVLAEVEDMMGSDVSQVSRLLAFSDEEQVVTALR 319
G DP + + + ++S+ +G+S+ R + LPP P+ ++R RF ++ + E + ++S +V F L + + +++ + + T+ + T L N + + F+E V T + +Q +L+ I+EAA K S D +K L+ +F +FV YL GE ER+ P PM D + N+++ ++ RV A+++ MMG DV+ ++R+L++ D + ALR
Sbjct: 170 GAGFVGDPFVDLIAPTEYAASDASGDSS--RDSTPLPPSPAGGATPPLPEP--TTRDRQRFERIMEEVLEEEKEEELPAILSRHVDFLLSVDVTALTNDLIRQ----------------EPTLTRVNT-LRNAYEFIVSFLESMVESTVDVQKENQTLLRLIIEAA-KTSPEVFDKRMKNLQDRFTFEFVKYLDGEVERLEKVEKDMAEKKKKRKVPAEKDDMPMGGDGNEVLNVIRIVRTRVCAQLDLMMGEDVAVLTRMLSYDDRFMMRAALR 422 The following BLAST results are available for this feature:
BLAST of EWM21905.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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