EWM21918.1, cds8762 (CDS) Nannochloropsis gaditana

Overview
NameEWM21918.1
Unique Namecds8762
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:171094..171240 +
Alignment locationKK037250.1:171364..172243 +
Alignment locationKK037250.1:172345..172997 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21918.1
ProductLeucine-rich repeat, cysteine-containing subtype
Orig transcript idgnl|cribi|Naga_100070g18.4232.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:171094..171240 +
KK037250.1supercontigKK037250.1:171364..172243 +
KK037250.1supercontigKK037250.1:172345..172997 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR006553Leu-rich_rpt_Cys-con_subtyp
IPR003590Leu-rich_rpt_RNase_inh_sub-typ
Homology
BLAST of EWM21918.1 vs. NCBI_GenBank
Match: gi|585102264|gb|EWM21918.1| (Leucine-rich repeat, cysteine-containing subtype [Nannochloropsis gaditana])

HSP 1 Score: 1110.52 bits (2871), Expect = 0.000e+0
Identity = 559/559 (100.00%), Postives = 559/559 (100.00%), Query Frame = 0
Query:    1 MSLIDLCIDSICQNILCYEVPPSFDVLPPDLVRRIFDSLTSHKALTKLTLLPLRYCDVTRLDLSPCKGVTDQWLRPFTDKTLTHLCLAFCNAITDAGLLNLTELGGLQVADLTACAGLRTGGLAAFRESWSMTSLTLNGCRNLTDEAVKPLAYLSALQHLRLRGCWQLSDAALNALAPLMPQLKTLDVNACRQFSSTSISFCVGKMREIRHLDLGYCPRGVGGGALEVLTRGPAPTTLQVLILDSSRSLSNADLFSLGKFRCLQRLSLRNCTTISDAGLCQLPSSLETLDASHCRGVRRLPAQSLPCLRSVNFAHSGLRDSDVGSLAVFPALVNINLDSCSIGNSGLVSLLPLKKLKRLNLADTGVSNGGMDVLAKLSSLSVISLFYTSISDSGVRQLSVLQNLTDLNLDNRDLTDTSLLHLSSLTKLRRLDMFSSRVSDVGLCFITSLVELVDLEICGGRITDKGLEYISQLPSLQRLNVSQNVQISNSGLHHLASLKDLEALNVSHSQVAAPGALKPLCRLRGLKILAVNGCRGMDDTTLHQIQSSLPNLRTVRAVS 559
            MSLIDLCIDSICQNILCYEVPPSFDVLPPDLVRRIFDSLTSHKALTKLTLLPLRYCDVTRLDLSPCKGVTDQWLRPFTDKTLTHLCLAFCNAITDAGLLNLTELGGLQVADLTACAGLRTGGLAAFRESWSMTSLTLNGCRNLTDEAVKPLAYLSALQHLRLRGCWQLSDAALNALAPLMPQLKTLDVNACRQFSSTSISFCVGKMREIRHLDLGYCPRGVGGGALEVLTRGPAPTTLQVLILDSSRSLSNADLFSLGKFRCLQRLSLRNCTTISDAGLCQLPSSLETLDASHCRGVRRLPAQSLPCLRSVNFAHSGLRDSDVGSLAVFPALVNINLDSCSIGNSGLVSLLPLKKLKRLNLADTGVSNGGMDVLAKLSSLSVISLFYTSISDSGVRQLSVLQNLTDLNLDNRDLTDTSLLHLSSLTKLRRLDMFSSRVSDVGLCFITSLVELVDLEICGGRITDKGLEYISQLPSLQRLNVSQNVQISNSGLHHLASLKDLEALNVSHSQVAAPGALKPLCRLRGLKILAVNGCRGMDDTTLHQIQSSLPNLRTVRAVS
Sbjct:    1 MSLIDLCIDSICQNILCYEVPPSFDVLPPDLVRRIFDSLTSHKALTKLTLLPLRYCDVTRLDLSPCKGVTDQWLRPFTDKTLTHLCLAFCNAITDAGLLNLTELGGLQVADLTACAGLRTGGLAAFRESWSMTSLTLNGCRNLTDEAVKPLAYLSALQHLRLRGCWQLSDAALNALAPLMPQLKTLDVNACRQFSSTSISFCVGKMREIRHLDLGYCPRGVGGGALEVLTRGPAPTTLQVLILDSSRSLSNADLFSLGKFRCLQRLSLRNCTTISDAGLCQLPSSLETLDASHCRGVRRLPAQSLPCLRSVNFAHSGLRDSDVGSLAVFPALVNINLDSCSIGNSGLVSLLPLKKLKRLNLADTGVSNGGMDVLAKLSSLSVISLFYTSISDSGVRQLSVLQNLTDLNLDNRDLTDTSLLHLSSLTKLRRLDMFSSRVSDVGLCFITSLVELVDLEICGGRITDKGLEYISQLPSLQRLNVSQNVQISNSGLHHLASLKDLEALNVSHSQVAAPGALKPLCRLRGLKILAVNGCRGMDDTTLHQIQSSLPNLRTVRAVS 559          
BLAST of EWM21918.1 vs. NCBI_GenBank
Match: gi|1210513598|dbj|GAX27470.1| (F-box and leucine-rich repeat protein 14 [Fistulifera solaris])

HSP 1 Score: 244.202 bits (622), Expect = 8.966e-69
Identity = 201/582 (34.54%), Postives = 305/582 (52.41%), Query Frame = 0
Query:    2 SLIDLCIDSICQNILCYEVPPSFDVLPPDLVRRIFDSLTSHKALTKLTLLPLRYCDVTRLDLSPCKG-VTDQWLRPF--------------TDKTLTHLCLAFCNAITDAGLLNLTELGGLQVADLTACAGLR-TGGLAAFR--ESWSMTSLTLNGCRNLTDEAVKPLAYL--SALQHLRLRGCWQLSDAALNALAPLMPQLKTLDVNACRQFSSTSISFCVGKMREIRHLDLGYCPRGVGGGALEVLTRGPAPTTLQVLILDSSRSLSNADLFSLGKFRCLQRLSLRNCTTISDAGLCQ----LPSSLETLDASHCRGVRRLPAQS-LPCLRSVNFAHSGLRDSDVGSLAVFPALVNINLDSCS-IGNSGLVSLLPLK-KLKRLNLADTGVSNGGMDVLAKLSSLSVISLFYTSISDSGVRQLSVLQNLTDLNLDNRDLTDTSLLHLSSLTKLRRLDMFSSRVSDVGLCFITSLVELVDLEICGGRITDKGLEYISQLPSLQRLNVSQNVQISNSGLHHLASLKDLEALNVSHSQVAAPGALKPLCRLRGLKILAVNGCRGMDDTTLHQIQSSLPNLRTVR 556
            SL  L  +++C+N L     P    LPPD+V  + ++L    A    TL  L+  +  +LDLS  +  VTD+W+  F              T   L HL L+  + ITD GLL +  +  L+   L  C  L  +    AF    S  + S++L  CR L D AV  L+     +L+ L L GC  L+D +L A    M QL++L + AC   +   +     +  E+  L+LG+C + +    +E+L +   P  LQ L L   R L   +   L     L  L L  C  +S   L +    LP  L  LD SH  G+ R   Q  +P L+++  ++S +RDS +   + F  LV +NL+SCS + +S L  L+     L+RL +AD  +S+ GM  +AK   ++ + LFY  IS+ G+R LS L +L  L++D+RD+TD+ L++L +  +L +LD+FS  V+D G  +++ L  L  L +CGG I D G EY+S+L  LQ LN+S+N  I+  G+ H  SL  L +LN+S + V    ++ PL  L+ L+ L V GCRGM D  LH +++ LP LR +R
Sbjct:   63 SLATLAAEAVCRN-LATNTAPLPGPLPPDVVEELTNTLRMALAYNSTTLEALQDSEWMQLDLSQVRNSVTDEWIHRFLGGRIKRSSQDTSPTTAYLKHLDLS-GSQITDEGLLAMGRMVFLETVVLDQCHYLMGSEDSKAFHVFASPRLQSVSLQDCRRLEDAAVLALSLYGRDSLRDLNLSGCRCLTDQSLVACGT-MWQLESLQLEACDMITDAGLEHL--QHLELVELNLGWCTK-ISDRGMELLLQQHMP--LQRLRLARCRMLKQPEWLYL-ICNTLSDLDLTGCLQLSSTSLGKALQGLPHLLH-LDVSHIPGIIRSGWQGRVPKLQTLVLSYSAVRDSHLTEWSDFRELVELNLESCSNVSDSSLRHLISAAPNLQRLVVADCAISDAGMVHIAKFKQMTHLDLFYCQISNRGLRCLSELADLQVLSIDSRDVTDSGLVYLQNFKQLVQLDLFSGHVTDRGCQYLSHLTSLESLALCGGGIGDAGCEYLSRLTRLQHLNLSENEDITEQGIAHFKSLSQLRSLNISQTSVT---SVMPLSSLKQLQSLCVYGCRGMAD--LHSLETKLPQLRCLR 629          
BLAST of EWM21918.1 vs. NCBI_GenBank
Match: gi|1210514582|dbj|GAX26539.1| (F-box and leucine-rich repeat protein 14 [Fistulifera solaris])

HSP 1 Score: 226.868 bits (577), Expect = 2.261e-62
Identity = 203/583 (34.82%), Postives = 307/583 (52.66%), Query Frame = 0
Query:    2 SLIDLCIDSICQNILCYEVP-PSFDVLPPDLVRRIFDSLTSHKALTKLTLLPLRYCDVTRLDLSPCKG-VTDQWLRPF--------------TDKTLTHLCLAFCNAITDAGLLNLTELGGLQVADLTACAGLR-TGGLAAFR--ESWSMTSLTLNGCRNLTDEAVKPLAYL--SALQHLRLRGCWQLSDAALNALAPLMPQLKTLDVNACRQFSSTSISFCVGKMREIRHLDLGYCPRGVGGGALEVLTRGPAPTTLQVLILDSSRSLSNADLFSLGKFRCLQRLSLRNCTTISDAGLCQ----LPSSLETLDASHCRGVRRLPAQS-LPCLRSVNFAHSGLRDSDVGSLAVFPALVNINLDSCS-IGNSGLVSLLPLK-KLKRLNLADTGVSNGGMDVLAKLSSLSVISLFYTSISDSGVRQLSVLQNLTDLNLDNRDLTDTSLLHLSSLTKLRRLDMFSSRVSDVGLCFITSLVELVDLEICGGRITDKGLEYISQLPSLQRLNVSQNVQISNSGLHHLASLKDLEALNVSHSQVAAPGALKPLCRLRGLKILAVNGCRGMDDTTLHQIQSSLPNLRTVR 556
            SL  L  +++C+N+    VP P    LPPD+V  +  +L    A    TL   +  +   LDLS  +  VTD+W+  F              T   L HL L+  + ITD GL  +  +  L+   L  C  L  +    AF    S  + S++L  CR L D AV  L+     +L+ L L GC  L+D +L A    M QL++L + AC   +   +        E+  L+LG+C + +    +E+L +   P  LQ L +   R L   +   L     L  L L  C  +S + L +    LP  L  LD SH  G+ R   Q  +P L+++  ++S +RDS +   + F  LV +NLDSCS + +S L  L+     L+RL +AD  +S+GGM  +AK   L+ + LFY  IS+ G+R LS L NL  L++D+RD+TD+ L++L ++ +L +LD+FS  V+D G  +++ L  L  L +CGG I D G EY+S+L  LQ LN+S+N  I++ G+ H  SL  L +LN+S + V    ++ PL  L+ L+ L+V GCRGM D  LH +++ LP LR +R
Sbjct:   63 SLATLAAEAVCRNLATSTVPLPG--PLPPDVVEELTTTLRMTLAYNPTTLEAFQDNEWMHLDLSQVRNSVTDEWIHRFLGGRIKRSIQDTSPTTAYLKHLDLS-GSQITDEGLSAMGRMVFLETVVLDQCHYLMGSEDCRAFHVFASPRLQSVSLQDCRRLEDAAVLALSLYGRDSLRALNLSGCRCLTDQSLVACGT-MWQLESLQLEACDMITDAGLERL--HHLELAELNLGWCTK-ISDRGMELLLQQHMP--LQRLRVARCRMLKQPEWLYL-ICSTLSDLDLTGCLQLSSSSLGKTLQGLPHLLH-LDVSHIPGIIRSGWQGRVPKLQTLVLSYSAVRDSHLTKWSDFRELVELNLDSCSNVSDSSLRHLVSAAPNLQRLVVADCAISDGGMVHIAKFKQLTHLDLFYCQISNRGLRCLSELTNLQVLSIDSRDVTDSGLIYLQNIKQLVQLDLFSGHVTDRGCQYLSHLTSLESLALCGGGIGDIGCEYLSRLIRLQHLNLSENEDITDQGIAHFKSLSQLRSLNISQTSVT---SVMPLASLKQLQSLSVYGCRGMAD--LHSLETKLPKLRCLR 629          
BLAST of EWM21918.1 vs. NCBI_GenBank
Match: gi|219122964|ref|XP_002181805.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407081|gb|EEC47019.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 221.09 bits (562), Expect = 7.015e-62
Identity = 178/545 (32.66%), Postives = 269/545 (49.36%), Query Frame = 0
Query:   27 LPPDLVRRIFDSLTSHKALTKLTLLPLRYCDVTRLDLSPCKGVTDQWLRPFTDKT-----------LTHLCLAFC-------------NAITDAGLLNLTELGGLQVADLTACAGLRTGGLAAFRESWSMTSLTLNGCRNLTDEAVKPLAYLSALQHLRLRGCWQLSDAALNALAPLMPQLKTLDVNACRQFSSTSISFCVGKMREIRHLDLGYCPRGVGGGALEVLTRGPAPTTLQVLILDSSRSLSNADLFSLGKFRCLQRLSLRNCTTISDAGLCQL------PSSLETLDASHC----RGVRRLPAQSLPCLRSVNFAHSGLRDSDVGSLAVFPALVNINLDSCSIGNSGLVSLLP---LKKLKRLNLADTGVSNGGMDVLAKLSSLSVISLFYTSISDSGVRQLSVLQNLTDLNLDNRDLTDTSLLHLSSLTKLRRLDMFSSRVSDVGLCFITSLVELVDLEICGGRITDKGLEYISQLPSLQRLNVSQNVQISNSGLHHLASLKDLEALNVSHSQVAAPGALKPLCRLRGLKILAVNGC 534
            LP D+V  I  SL  H AL   TL  LR C++  L LS C+GVTD+WL   + ++           + H C A                 +TD GL+ L +LG L+VA L  C  +   GL     S  + +L+L  CR LTDEA+  +++L +LQ                           L ++ CR  +  S++  +  M  +R L L  C                               ++N  L +L   + LQ +SL  C  +SDAG+  L       S+L+ L  + C     GV+ L    +  ++++   +S ++D  +  L   P L  +NLDSC IG+  +        L  L  L+LAD+ +S+ GM  +AK + L  +SLFY SIS+ G+R LS+L  L  LNLD+RD++D  L HL  L +L+ LD+FS RV+D+G  +++ +  L  LE+CGG + D G   +++L +L  LN+SQN +I+N G   LA+L  L+ALN+SH++V A  AL+    L  L+ LA+ GC
Sbjct:    1 LPQDVVDDILQSLIRHSALNATTLRILRNCELGVLSLSGCRGVTDEWLEALSAESSDSPPHLRTALMWHPCAASSALTNTTLLDLRGSQRLTDRGLMQLHDLGRLEVAKLDNCHSVVGRGLVVLSSSPRLHTLSLTNCRRLTDEAIVNISHLQSLQ--------------------------ALSLDGCRCITDFSLA-ALADMYNLRKLGLSQCDL-----------------------------ITNEGLKALEHLQRLQEISLGWCRQVSDAGIQTLTAQPGRSSNLQILRLARCPITDEGVQYLG--KIRNVKTLELCYSAVKDIHLTKLVNLPMLEELNLDSCPIGDLAIQHFANHNVLPNLVSLDLADSDISDLGMVQIAKFTKLKRLSLFYCSISNRGLRHLSILTELRVLNLDSRDISDDGLRHLQHLKQLKSLDIFSGRVTDLGCTYLSKIKTLESLELCGGGVRDAGCASLAKLENLTSLNLSQNERITNRGAAALAALSKLKALNLSHTRVNAS-ALRYFSGLMNLQSLALYGC 486          
BLAST of EWM21918.1 vs. NCBI_GenBank
Match: gi|1072236393|gb|OEU21121.1| (RNI-like protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 226.868 bits (577), Expect = 3.214e-61
Identity = 179/475 (37.68%), Postives = 276/475 (58.11%), Query Frame = 0
Query:   93 ITDAGLLNLTELGGLQVADLTACAGLRTGGLAAFRESWSMTSLTLNGCRNLTDEAVKPLAYLSALQHLRLRGCWQLSDAALNALAPLMPQLKTLDVNACRQFSSTSISFCVGKMREIRHLDLGYCPRGVGGGALEVLTRGPAPTTLQVLILDSSR-SLSNADLFSLGKFRCLQRLSLRNCTTISDAGLCQLP---SSLETLDASHCRGVRRLPAQ-SLPCLRSVNFAHSGLRDSDVGSLAVFPALVNINLDSCSIGN---SGLVSLLPLKKLKRLNLADTGVSNGGMDVLAKLSSLSVISLFYTSISDSGVRQLSVLQNLTDLNLDNRDLTDTSLLHLSSLTKLRRLDMFSSRVSDVGLCFITSLVELVDLEICGGRITDKGLEYISQLPSLQRLNVSQNVQISNSGLHHLASLKDLEALNVSHSQVAAPGALKPLCRLRGLKILAVNGCRGMDDT---TLHQIQSSLPNLRTVR 556
            +TD GLL L++L  L++A L  C  ++  GL AF  S  + +L+L  CR L+DEA+  +++L +L+ L L GC  L+D +L A+  L+ ++K LD++ C   + T +   +  ++ I  L LG+C R +    +E+L      +   + IL  +R  +++  +  L     L+ L L  C+ I  + L       + LE LD S+C G+ R   Q  +  L++++  +S +RDS +  L    AL  INLDSC IG+   S L     +  L  L+LADT +S+ GM  LAK   L  +SLFY +++++ +R L+ L NL  LNLD+R++ D  L HL SL  L+ LD+FS RV+D G C I  +  L  LE+CGG +TD G   ++ L +L  LN+SQN +I+N G   LA+L +L+ALN+S+++V + GAL     L  LK LA+ GC+GM +T    L ++QS LPNL+ VR
Sbjct:  307 LTDKGLLQLSDLSSLKIAKLDNCHSIQGRGLVAFSRSHHLHTLSLANCRRLSDEAIINISHLISLEALSLDGCRCLTDRSLAAIGNLI-RIKKLDLSQCDLITDTGLQE-LEHIQNIEELSLGWC-RSITDDGIELLANQLGRSK-NMRILSVARIPITDTGIKHLSLLSALEELDLNGCSNIGSSSLGNTLAKLTKLERLDVSYCPGILRSSWQGKIKSLKTLDACYSAVRDSHISRLTDLSALEEINLDSCPIGDWTISHLADNTVVPNLVSLDLADTDLSDLGMVHLAKFKKLKRLSLFYCNLTNASLRHLTSLSNLEVLNLDSREIGDNGLWHLRSLQNLKSLDIFSGRVTDTGCCHIAQIKSLESLELCGGGVTDTGCSILAALENLISLNLSQNERITNRGAAALAALSNLKALNLSNTRVNS-GALIHFSDLMNLKSLALYGCQGMKETRNDMLDRLQSGLPNLKCVR 776          
BLAST of EWM21918.1 vs. NCBI_GenBank
Match: gi|698502162|ref|XP_009796748.1| (PREDICTED: F-box/LRR-repeat protein 14 isoform X1 [Nicotiana sylvestris] >gi|1025325270|ref|XP_016504875.1| PREDICTED: F-box/LRR-repeat protein 14-like isoform X1 [Nicotiana tabacum])

HSP 1 Score: 211.46 bits (537), Expect = 2.094e-57
Identity = 183/570 (32.11%), Postives = 290/570 (50.88%), Query Frame = 0
Query:    2 SLIDLCIDSICQNILCYEVPPSFDVLPPDLVRRIFDSLTSHKALTKLTLLPLRYCDVTRLDLSPCKGVTDQWLRPFTDKTLTHLCLAF-CNAITDAGLLNLTELGGLQVADLTACAGLRTGGLAAFRESWSMTSLTLNGCRNLTDEAVKPLAYLSALQHLRLRGCWQLSDAALNALAPLMPQLKTLDVNACRQFSSTSISFCVGKMREIRHLDLGYCPRGVGGGALEVLTRGPAPTTLQVLILDSSRSLSNADLFSLGKFRCLQRLSLRNCTTISDAGLCQLPSSLETLDASHC-------------RGVRRLPAQSLPCLRSVNFAHSGLRDSDVGSLAVFPALVNINLDSCSIGNSGLVSLLPLKKLKRLNLADTGVSNGGMDVLAKLSSLSVISLFYTSISDSGVRQLSVLQNLTDLNLDNRDLTDTSLLHLSSLTKLRRLDMFSSRVSDVGLCFITSLVELVDLEICGGRITDKGLEYISQLPSLQRLNVSQNVQISNSGLHHLASLKDLEALNVSHSQVAAPGALKPLCRLRGLKILAVNGCRGMDDTTLHQIQSS-LPNLRTVR 556
            SL++LCI  IC++I  Y    +F VLP D+ ++IFD L   + LT ++L   R C +  LD+    G+ DQW+   + +  + L L    + +TD+GL NL +   LQ                         +L LN C  +TD  V+ ++ LS L  L  R    L+   ++ALA L+  LK LD+  C +     +   +  +  +  L++  C   +    ++ L      T L+VL + SS+       F     + L++L+L N         C     LE+L A H               G  +    SL  L+ +N   + + D+ +  L  F  L ++NLDSC I + GL++L  L +LK L L+DT V N G+  L+ L +L  ++L +T ++DSG+R+L  L +L  LNLD R +TDT L  L+SLT L  LD+F +R++D G  ++     L  LEICGG +TD G++ I  L SL  LN+SQN  +++  L  ++ L  L +LNVS+S++ + G L+ L +L+ LK L +  C+ +    + ++QS+ LPNL   R
Sbjct:   54 SLMELCIRKICEDIDKYN---TFSVLPRDISQQIFDELVGTQRLTDVSLEAFRDCALQDLDMGEYPGLNDQWMDVISSQGPSLLSLDVSASDVTDSGLTNLKDCKNLQ-------------------------ALNLNYCDQITDRGVENISGLSNLTTLSFRRNNILTAQGMSALAELINLLK-LDLERCPKIHGGMVH--LKGLTRLESLNIN-CCNCITDSDMKPL---AGLTNLKVLQISSSKVTDYGVTF----LKALEKLTLLNMEGCPVTAAC-----LESLSALHALLYLNLSRCCLTDDGCEKFS--SLQSLKVLNLGFNEITDAILVHLKGFTNLESLNLDSCRIKDEGLINLSGLHRLKSLELSDTEVGNNGIRHLSGLRNLDSLNLSFTVVTDSGLRKLCGLSSLRSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGTSYLRHFKNLRSLEICGGGLTDAGVKNIKDLTSLTLLNLSQNSHLTDKSLEAISGLTQLVSLNVSNSRITSAG-LQHLKQLKNLKSLTLESCK-VTANDIKKLQSTELPNLVNYR 575          
BLAST of EWM21918.1 vs. NCBI_GenBank
Match: gi|661898218|emb|CDO98185.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 209.92 bits (533), Expect = 7.400e-57
Identity = 176/563 (31.26%), Postives = 276/563 (49.02%), Query Frame = 0
Query:    2 SLIDLCIDSICQNILCYEVPPSFDVLPPDLVRRIFDSLTSHKALTKLTLLPLRYCDVTRLDLSPCKGVTDQWLRPFTDKTLTHLCLAFCNA-ITDAGLLNLTELGGLQVADLTACAGLRTGGLAAFRESWSMTSLTLNGCRNLTDEAVKPLAYLSALQHLRLRGCWQLSDAALNALAPLMPQLKTLDVNACRQFSSTSISFCVG--KMREIRHLDLGYCPRGVGG----GALEVLTRGPAPTTLQVLILDSSRSLSNADLFSLGKFRCLQRLSLRNCTTISDAGLCQLPSSLETLDASHCRGVRRLPAQSLPCLRSVNFAHSGLRDSDVGSLAVFPALVNINLDSCSIGNSGLVSLLPLKKLKRLNLADTGVSNGGMDVLAKLSSLSVISLFYTSISDSGVRQLSVLQNLTDLNLDNRDLTDTSLLHLSSLTKLRRLDMFSSRVSDVGLCFITSLVELVDLEICGGRITDKGLEYISQLPSLQRLNVSQNVQISNSGLHHLASLKDLEALNVSHSQVAAPGALKPLCRLRGLKILAVNGCRGMDDTTLHQIQSS-LPNLRTVR 556
            SL++LC   IC+ I  Y    SF +LP D+ ++IFD L   + L  + L   R C +  L+L    G  D W+     +  + L + F  + +TDAGL +L +  GLQ  +   C  +   G+A      +MT+L+      +T + +  L+ L  L  L L  C ++    ++     + +L++L++N C   + T +    G   ++ ++         GV        LE+L     P T              A L SL     L  L+L  C    D                 C    RL A     L+ +N   + + D+ +  L     L ++NLDSCSI + GLV+L  L +LK L L+DT V + G+  L+ L +L  ++L +T ++D G+R+LS L  L  LNLD R +TDT L  L+SLT L  LD+F +R++D G  ++     L  LEICGG +TD G++ I  L SL  LN+SQN  +++  L  ++ L  L +LNVS+S+V + G L+ L  L+ LK L +  C+ +    L ++Q++ LPNL   R
Sbjct:   55 SLMELCTYKICEAIHNY---GSFSMLPRDVSQQIFDELVYSQRLNDVILQAFRDCALQDLNLGEYPGFNDSWMDMIASQGSSLLSVDFSGSDVTDAGLSHLKDCTGLQALNFNYCDKISDNGMAHISGLSNMTTLSFRRNNMITAQGMSALSGLVNLVKLDLERCPKIHGGLVHLKG--LTKLESLNINCCNCITDTDMKPLQGLANLKALQISSSKVTDHGVNFLKALHKLELLNMEGCPVTA-------------ACLESLSALGALLYLNLSRCNLADDG----------------CDKFSRLQA-----LKVLNLGFNEISDAILVYLKGLTNLESLNLDSCSIRDEGLVNLAGLSRLKCLELSDTEVGSSGLRHLSGLGNLESLNLSFTVVTDGGLRKLSGLSCLRSLNLDVRQITDTGLAALTSLTGLTHLDLFGARITDSGTNYLKCFRNLRSLEICGGGLTDAGVKNIKDLTSLALLNLSQNSHLTDKSLEAISGLTQLVSLNVSNSRVTSAG-LQHLKPLKNLKSLTLESCK-VTANDLKKLQATHLPNLVNFR 576          
BLAST of EWM21918.1 vs. NCBI_GenBank
Match: gi|586754442|ref|XP_006852826.1| (F-box/LRR-repeat protein 14 [Amborella trichopoda] >gi|769802012|ref|XP_011626398.1| F-box/LRR-repeat protein 14 [Amborella trichopoda] >gi|769802014|ref|XP_011626399.1| F-box/LRR-repeat protein 14 [Amborella trichopoda] >gi|1173116530|ref|XP_020528072.1| F-box/LRR-repeat protein 14 [Amborella trichopoda] >gi|1173116533|ref|XP_020528073.1| F-box/LRR-repeat protein 14 [Amborella trichopoda] >gi|1173116535|ref|XP_020528074.1| F-box/LRR-repeat protein 14 [Amborella trichopoda] >gi|548856440|gb|ERN14293.1| hypothetical protein AMTR_s00033p00180120 [Amborella trichopoda])

HSP 1 Score: 208.764 bits (530), Expect = 1.648e-56
Identity = 182/567 (32.10%), Postives = 283/567 (49.91%), Query Frame = 0
Query:    2 SLIDLCIDSICQNILCYEVPPSFDVLPPDLVRRIFDSLTSHKALTKLTLLPLRYCDVTRLDLSPCKGVTDQWLRPFTDKTLTHLCLAFCNA-ITDAGLLNLTELGGLQVADLTACAGLRTGGLAAFRESWSMTSLTLNGCRNLTDEAVKPLAYLSALQHLRLRGCWQLSDAALNALAPLMPQLKTLDVNACRQFSSTSISFCVG--KMREI-----RHLDLGY-CPRGVGGGALEVLTRGPAPTTLQVLILDSSRSLSNADLFSLGKFRCLQRLSLRNCTTISDAGLCQLPSSLETLDASHCRGVRRLPAQSLPCLRSVNFAHSGLRDSDVGSLAVFPALVNINLDSCSIGNSGLVSLLPLKKLKRLNLADTGVSNGGMDVLAKLSSLSVISLFYTSISDSGVRQLSVLQNLTDLNLDNRDLTDTSLLHLSSLTKLRRLDMFSSRVSDVGLCFITSLVELVDLEICGGRITDKGLEYISQLPSLQRLNVSQNVQISNSGLHHLASLKDLEALNVSHSQVAAPG--ALKPLCRLRGLKILAVNGCRGMDDTTLHQIQ-SSLPNLRTVR 556
            SL++LCI  IC+ I  Y+   SF +LP DL ++IF+ L + + L  ++L   + C +  + L    GV D W+R    +  + L +    + +TD+GL  L E   LQ  +   C  +   GLA      ++TSL+     ++T   ++  A L  L++L L  C ++    ++     + +L+ L++  C   ++  +    G   +RE+     +  D G  C RG+    L VL     P T              A L +L     L  L+L  C  ISD G C+                       L  L+ +N   + + D+ +  L     L  +NLDSC IG+ GL +L    +LKRL L+DT V N G+  L+ L +L  I+L +T I+DSG+R+LS L +L  LNLD R +TD  L  L+ LT L  LD+F +R+SD+G   +     L  LE+CGG ITD  L+ I  L SL+ LN+SQN  +++  L  ++ L  L +LNVS+S+V   G   LKP   L+ LK L++  C+ +  + L ++Q ++LPNL   R
Sbjct:   55 SLMELCIRKICEEIKGYK---SFSILPRDLSQQIFNELVNSQGLNDVSLEAFQDCALQDVFLGDYPGVKDSWIRTIASQGPSLLSVDISGSDVTDSGLSLLMECVNLQSLNCNYCDHISDLGLAYLSGLTNLTSLSFKKNNSITAPGMEAFAALINLRNLDLERCSRIHGGLVHLKG--LTRLEYLNIGWCNCITNADMMPLSGLTNLRELQISRSKVTDAGIACLRGMS--KLYVLNIEGCPVT-------------GACLETLSGLGALSYLNLNACG-ISDGG-CE-------------------KFAGLVNLKFLNLGFNNITDTCLVHLKGLTKLEMLNLDSCKIGDEGLNNLEGHVQLKRLELSDTEVGNNGLRHLSVLRNLESINLSFTQITDSGLRRLSGLTSLKSLNLDTRQITDAGLAALTGLTGLTHLDLFGARISDIGTSCLRYFKNLESLELCGGLITDDALKNIKDLTSLRLLNLSQNCNLTDKALESISGLTALVSLNVSNSRVTNAGLHHLKP---LKNLKSLSLEACK-VTASELKKLQMTALPNLVNYR 576          
BLAST of EWM21918.1 vs. NCBI_GenBank
Match: gi|1044540566|ref|XP_017441025.1| (PREDICTED: F-box/LRR-repeat protein 14 [Vigna angularis])

HSP 1 Score: 208.764 bits (530), Expect = 1.784e-56
Identity = 166/566 (29.33%), Postives = 290/566 (51.24%), Query Frame = 0
Query:    2 SLIDLCIDSICQNILCYEVPPSFDVLPPDLVRRIFDSLTSHKALTKLTLLPLRYCDVTRLDLSPCKGVTDQWLRPFTDKTLTHLCLAFCNAITDAGLLNLTELGGLQVADLTACAGLRTGGLAAFRESWSMTSLTLNGCRNLTDEAVKPLAYLSALQHLRLRGCWQLSDAALNALAPLMPQLKTLDVNACRQFSSTSISFCVGKMREIRHLDLGYCPRGVGGGALEVLTRGPAPTTLQVLILDSSRSLSNADLFSLG--KFRCLQRLSLRNCTTISDAGLC----QLPSSLETLDASHC----RGVRRLPAQSLPCLRSVNFAHSGLRDSDVGSLAVFPALVNINLDSCSIGNSGLVSLLPLKKLKRLNLADTGVSNGGMDVLAKLSSLSVISLFYTSISDSGVRQLSVLQNLTDLNLDNRDLTDTSLLHLSSLTKLRRLDMFSSRVSDVGLCFITSLVELVDLEICGGRITDKGLEYISQLPSLQRLNVSQNVQISNSGLHHLASLKDLEALNVSHSQVAAPGALKPLCRLRGLKILAVNGCRGMDDTTLHQIQSS-LPNLRTVR 556
            SL+DLCI+ I ++   YE   SF +LP D+ ++IF+ L     LT+ +L   R C +  +DL    GV D W+   + + L+ L +               ++ G QV D          GL   ++  ++ +LTLN C   ++  +K ++ LS L  L +R    +    + A + L   L+ LD+  C +     +   +  ++++  L++G C         + +T     +  +++ L     +SN+ +  +G    R L++L+  N    +  G C       +SL  L+ S C     G  ++    L  L+ ++ A + + D+ +  L     L  +NLDSC IG+ GL +L  L  LK L L+DT + N G   L+ L+ L  ++L +T+++D+G+++LS L  L  LNLD R +TD  L +L  L+ L  LD+F + +SD G  ++ S   L  LEICGG +TD G++ I ++ SL +LN+SQN  +++  L  ++ +  L +LNVS+S++   G L+ L  L+ L+ L +  C+ +  + + ++QS+ LPNL + R
Sbjct:   57 SLMDLCINRIREDFHKYE---SFSILPRDISQQIFNELVDSHCLTEASLEAFRDCALQDIDLGEYSGVDDNWMDVISSQGLSLLSV---------------DVSGSQVTD---------NGLRLLKDCSNLQALTLNYCDQFSEYGLKHISGLSNLDSLSIRKSSSVKPDGMRAFSNLF-NLEKLDLERCSEIHGGFVH--LKGLKKLEFLNIGCC---------KCVTDSDMKSISELINL-KELHISNSSITDIGISYLRGLEKLTTLNVEGCNITGACLESIHALASLACLNLSRCGLSNDGFEKIAG--LKSLKRLSLAFNRITDASLVHLKGLTNLEYLNLDSCRIGDDGLANLTGLTLLKSLVLSDTDIGNSGTKYLSSLNKLEDLNLSFTTVTDNGLKRLSRLTQLKSLNLDTRLITDNGLSNLIGLSGLVTLDLFGAHISDHGTAYLRSFKNLQSLEICGGGLTDDGVKNIREIVSLTQLNLSQNCNLTDKTLELISGMTALRSLNVSNSRI-TNGGLRYLKPLKNLRSLTLESCK-VTASEIKKLQSTDLPNLISFR 578          
BLAST of EWM21918.1 vs. NCBI_GenBank
Match: gi|965659852|dbj|BAT76271.1| (hypothetical protein VIGAN_01424900 [Vigna angularis var. angularis])

HSP 1 Score: 207.994 bits (528), Expect = 3.200e-56
Identity = 165/566 (29.15%), Postives = 291/566 (51.41%), Query Frame = 0
Query:    2 SLIDLCIDSICQNILCYEVPPSFDVLPPDLVRRIFDSLTSHKALTKLTLLPLRYCDVTRLDLSPCKGVTDQWLRPFTDKTLTHLCLAFCNAITDAGLLNLTELGGLQVADLTACAGLRTGGLAAFRESWSMTSLTLNGCRNLTDEAVKPLAYLSALQHLRLRGCWQLSDAALNALAPLMPQLKTLDVNACRQFSSTSISFCVGKMREIRHLDLGYCPRGVGGGALEVLTRGPAPTTLQVLILDSSRSLSNADLFSLG--KFRCLQRLSLRNCTTISDAGLC----QLPSSLETLDASHC----RGVRRLPAQSLPCLRSVNFAHSGLRDSDVGSLAVFPALVNINLDSCSIGNSGLVSLLPLKKLKRLNLADTGVSNGGMDVLAKLSSLSVISLFYTSISDSGVRQLSVLQNLTDLNLDNRDLTDTSLLHLSSLTKLRRLDMFSSRVSDVGLCFITSLVELVDLEICGGRITDKGLEYISQLPSLQRLNVSQNVQISNSGLHHLASLKDLEALNVSHSQVAAPGALKPLCRLRGLKILAVNGCRGMDDTTLHQIQSS-LPNLRTVR 556
            SL+DLCI+ I ++   YE   SF +LP D+ ++IF+ L     LT+ +L   R C +  +DL    GV D W+   + + L+ L +               ++ G QV D          GL   ++  ++ +LTLN C   ++  +K ++ LS L  L +R    +    + A + L   L+ LD+  C +     +   +  ++++  L++G C         + +T     +  +++ L     +SN+ +  +G    R L++L+  N    +  G C       +SL  L+ S C     G  ++    L  L+ ++ A + + D+ +  L     L  +NLDSC IG+ GL +L  L  LK L L+DT + N G+  ++ L+ L  ++L +T+++D+G+++LS L  L  LNLD R +TD  L +L  L+ L  LD+F + +SD G  ++ S   L  LEICGG +TD G++ I ++ SL +LN+SQN  +++  L  ++ +  L +LNVS+S++   G L+ L  L+ L+ L +  C+ +  + + ++QS+ LPNL + R
Sbjct:   57 SLMDLCINRIREDFHKYE---SFSILPRDISQQIFNELVDSHCLTEASLEAFRDCALQDIDLGEYSGVDDNWMDVISSQGLSLLSV---------------DVSGSQVTD---------NGLRLLKDCSNLQALTLNYCDQFSEYGLKHISGLSNLDSLSIRKSSSVKPDGMRAFSNLF-NLEKLDLERCSEIHGGFVH--LKGLKKLEFLNIGCC---------KCVTDSDMKSISELINL-KELHISNSSITDIGISYLRGLEKLTTLNVEGCNITGACLESIHALASLACLNLSRCGLSNDGFEKIAG--LKSLKRLSLAFNRITDASLVHLKGLTNLEYLNLDSCRIGDDGLANLTGLTLLKSLVLSDTDIGNSGLRYISGLNKLEDLNLSFTTVTDNGLKRLSRLTQLKSLNLDTRLITDNGLSNLIGLSGLVTLDLFGAHISDHGTAYLRSFKNLQSLEICGGGLTDDGVKNIREIVSLTQLNLSQNCNLTDKTLELISGMTALRSLNVSNSRI-TNGGLRYLKPLKNLRSLTLESCK-VTVSEIKKLQSTDLPNLISFR 578          
The following BLAST results are available for this feature:
BLAST of EWM21918.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102264|gb|EWM21918.1|0.000e+0100.00Leucine-rich repeat, cysteine-containing subtype [... [more]
gi|1210513598|dbj|GAX27470.1|8.966e-6934.54F-box and leucine-rich repeat protein 14 [Fistulif... [more]
gi|1210514582|dbj|GAX26539.1|2.261e-6234.82F-box and leucine-rich repeat protein 14 [Fistulif... [more]
gi|219122964|ref|XP_002181805.1|7.015e-6232.66predicted protein, partial [Phaeodactylum tricornu... [more]
gi|1072236393|gb|OEU21121.1|3.214e-6137.68RNI-like protein [Fragilariopsis cylindrus CCMP110... [more]
gi|698502162|ref|XP_009796748.1|2.094e-5732.11PREDICTED: F-box/LRR-repeat protein 14 isoform X1 ... [more]
gi|661898218|emb|CDO98185.1|7.400e-5731.26unnamed protein product [Coffea canephora][more]
gi|586754442|ref|XP_006852826.1|1.648e-5632.10F-box/LRR-repeat protein 14 [Amborella trichopoda]... [more]
gi|1044540566|ref|XP_017441025.1|1.784e-5629.33PREDICTED: F-box/LRR-repeat protein 14 [Vigna angu... [more]
gi|965659852|dbj|BAT76271.1|3.200e-5629.15hypothetical protein VIGAN_01424900 [Vigna angular... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8792rna8792Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications