EWM21918.1, cds8762 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21918.1 vs. NCBI_GenBank
Match: gi|585102264|gb|EWM21918.1| (Leucine-rich repeat, cysteine-containing subtype [Nannochloropsis gaditana]) HSP 1 Score: 1110.52 bits (2871), Expect = 0.000e+0 Identity = 559/559 (100.00%), Postives = 559/559 (100.00%), Query Frame = 0
Query: 1 MSLIDLCIDSICQNILCYEVPPSFDVLPPDLVRRIFDSLTSHKALTKLTLLPLRYCDVTRLDLSPCKGVTDQWLRPFTDKTLTHLCLAFCNAITDAGLLNLTELGGLQVADLTACAGLRTGGLAAFRESWSMTSLTLNGCRNLTDEAVKPLAYLSALQHLRLRGCWQLSDAALNALAPLMPQLKTLDVNACRQFSSTSISFCVGKMREIRHLDLGYCPRGVGGGALEVLTRGPAPTTLQVLILDSSRSLSNADLFSLGKFRCLQRLSLRNCTTISDAGLCQLPSSLETLDASHCRGVRRLPAQSLPCLRSVNFAHSGLRDSDVGSLAVFPALVNINLDSCSIGNSGLVSLLPLKKLKRLNLADTGVSNGGMDVLAKLSSLSVISLFYTSISDSGVRQLSVLQNLTDLNLDNRDLTDTSLLHLSSLTKLRRLDMFSSRVSDVGLCFITSLVELVDLEICGGRITDKGLEYISQLPSLQRLNVSQNVQISNSGLHHLASLKDLEALNVSHSQVAAPGALKPLCRLRGLKILAVNGCRGMDDTTLHQIQSSLPNLRTVRAVS 559
MSLIDLCIDSICQNILCYEVPPSFDVLPPDLVRRIFDSLTSHKALTKLTLLPLRYCDVTRLDLSPCKGVTDQWLRPFTDKTLTHLCLAFCNAITDAGLLNLTELGGLQVADLTACAGLRTGGLAAFRESWSMTSLTLNGCRNLTDEAVKPLAYLSALQHLRLRGCWQLSDAALNALAPLMPQLKTLDVNACRQFSSTSISFCVGKMREIRHLDLGYCPRGVGGGALEVLTRGPAPTTLQVLILDSSRSLSNADLFSLGKFRCLQRLSLRNCTTISDAGLCQLPSSLETLDASHCRGVRRLPAQSLPCLRSVNFAHSGLRDSDVGSLAVFPALVNINLDSCSIGNSGLVSLLPLKKLKRLNLADTGVSNGGMDVLAKLSSLSVISLFYTSISDSGVRQLSVLQNLTDLNLDNRDLTDTSLLHLSSLTKLRRLDMFSSRVSDVGLCFITSLVELVDLEICGGRITDKGLEYISQLPSLQRLNVSQNVQISNSGLHHLASLKDLEALNVSHSQVAAPGALKPLCRLRGLKILAVNGCRGMDDTTLHQIQSSLPNLRTVRAVS
Sbjct: 1 MSLIDLCIDSICQNILCYEVPPSFDVLPPDLVRRIFDSLTSHKALTKLTLLPLRYCDVTRLDLSPCKGVTDQWLRPFTDKTLTHLCLAFCNAITDAGLLNLTELGGLQVADLTACAGLRTGGLAAFRESWSMTSLTLNGCRNLTDEAVKPLAYLSALQHLRLRGCWQLSDAALNALAPLMPQLKTLDVNACRQFSSTSISFCVGKMREIRHLDLGYCPRGVGGGALEVLTRGPAPTTLQVLILDSSRSLSNADLFSLGKFRCLQRLSLRNCTTISDAGLCQLPSSLETLDASHCRGVRRLPAQSLPCLRSVNFAHSGLRDSDVGSLAVFPALVNINLDSCSIGNSGLVSLLPLKKLKRLNLADTGVSNGGMDVLAKLSSLSVISLFYTSISDSGVRQLSVLQNLTDLNLDNRDLTDTSLLHLSSLTKLRRLDMFSSRVSDVGLCFITSLVELVDLEICGGRITDKGLEYISQLPSLQRLNVSQNVQISNSGLHHLASLKDLEALNVSHSQVAAPGALKPLCRLRGLKILAVNGCRGMDDTTLHQIQSSLPNLRTVRAVS 559
BLAST of EWM21918.1 vs. NCBI_GenBank
Match: gi|1210513598|dbj|GAX27470.1| (F-box and leucine-rich repeat protein 14 [Fistulifera solaris]) HSP 1 Score: 244.202 bits (622), Expect = 8.966e-69 Identity = 201/582 (34.54%), Postives = 305/582 (52.41%), Query Frame = 0
Query: 2 SLIDLCIDSICQNILCYEVPPSFDVLPPDLVRRIFDSLTSHKALTKLTLLPLRYCDVTRLDLSPCKG-VTDQWLRPF--------------TDKTLTHLCLAFCNAITDAGLLNLTELGGLQVADLTACAGLR-TGGLAAFR--ESWSMTSLTLNGCRNLTDEAVKPLAYL--SALQHLRLRGCWQLSDAALNALAPLMPQLKTLDVNACRQFSSTSISFCVGKMREIRHLDLGYCPRGVGGGALEVLTRGPAPTTLQVLILDSSRSLSNADLFSLGKFRCLQRLSLRNCTTISDAGLCQ----LPSSLETLDASHCRGVRRLPAQS-LPCLRSVNFAHSGLRDSDVGSLAVFPALVNINLDSCS-IGNSGLVSLLPLK-KLKRLNLADTGVSNGGMDVLAKLSSLSVISLFYTSISDSGVRQLSVLQNLTDLNLDNRDLTDTSLLHLSSLTKLRRLDMFSSRVSDVGLCFITSLVELVDLEICGGRITDKGLEYISQLPSLQRLNVSQNVQISNSGLHHLASLKDLEALNVSHSQVAAPGALKPLCRLRGLKILAVNGCRGMDDTTLHQIQSSLPNLRTVR 556
SL L +++C+N L P LPPD+V + ++L A TL L+ + +LDLS + VTD+W+ F T L HL L+ + ITD GLL + + L+ L C L + AF S + S++L CR L D AV L+ +L+ L L GC L+D +L A M QL++L + AC + + + E+ L+LG+C + + +E+L + P LQ L L R L + L L L L C +S L + LP L LD SH G+ R Q +P L+++ ++S +RDS + + F LV +NL+SCS + +S L L+ L+RL +AD +S+ GM +AK ++ + LFY IS+ G+R LS L +L L++D+RD+TD+ L++L + +L +LD+FS V+D G +++ L L L +CGG I D G EY+S+L LQ LN+S+N I+ G+ H SL L +LN+S + V ++ PL L+ L+ L V GCRGM D LH +++ LP LR +R
Sbjct: 63 SLATLAAEAVCRN-LATNTAPLPGPLPPDVVEELTNTLRMALAYNSTTLEALQDSEWMQLDLSQVRNSVTDEWIHRFLGGRIKRSSQDTSPTTAYLKHLDLS-GSQITDEGLLAMGRMVFLETVVLDQCHYLMGSEDSKAFHVFASPRLQSVSLQDCRRLEDAAVLALSLYGRDSLRDLNLSGCRCLTDQSLVACGT-MWQLESLQLEACDMITDAGLEHL--QHLELVELNLGWCTK-ISDRGMELLLQQHMP--LQRLRLARCRMLKQPEWLYL-ICNTLSDLDLTGCLQLSSTSLGKALQGLPHLLH-LDVSHIPGIIRSGWQGRVPKLQTLVLSYSAVRDSHLTEWSDFRELVELNLESCSNVSDSSLRHLISAAPNLQRLVVADCAISDAGMVHIAKFKQMTHLDLFYCQISNRGLRCLSELADLQVLSIDSRDVTDSGLVYLQNFKQLVQLDLFSGHVTDRGCQYLSHLTSLESLALCGGGIGDAGCEYLSRLTRLQHLNLSENEDITEQGIAHFKSLSQLRSLNISQTSVT---SVMPLSSLKQLQSLCVYGCRGMAD--LHSLETKLPQLRCLR 629
BLAST of EWM21918.1 vs. NCBI_GenBank
Match: gi|1210514582|dbj|GAX26539.1| (F-box and leucine-rich repeat protein 14 [Fistulifera solaris]) HSP 1 Score: 226.868 bits (577), Expect = 2.261e-62 Identity = 203/583 (34.82%), Postives = 307/583 (52.66%), Query Frame = 0
Query: 2 SLIDLCIDSICQNILCYEVP-PSFDVLPPDLVRRIFDSLTSHKALTKLTLLPLRYCDVTRLDLSPCKG-VTDQWLRPF--------------TDKTLTHLCLAFCNAITDAGLLNLTELGGLQVADLTACAGLR-TGGLAAFR--ESWSMTSLTLNGCRNLTDEAVKPLAYL--SALQHLRLRGCWQLSDAALNALAPLMPQLKTLDVNACRQFSSTSISFCVGKMREIRHLDLGYCPRGVGGGALEVLTRGPAPTTLQVLILDSSRSLSNADLFSLGKFRCLQRLSLRNCTTISDAGLCQ----LPSSLETLDASHCRGVRRLPAQS-LPCLRSVNFAHSGLRDSDVGSLAVFPALVNINLDSCS-IGNSGLVSLLPLK-KLKRLNLADTGVSNGGMDVLAKLSSLSVISLFYTSISDSGVRQLSVLQNLTDLNLDNRDLTDTSLLHLSSLTKLRRLDMFSSRVSDVGLCFITSLVELVDLEICGGRITDKGLEYISQLPSLQRLNVSQNVQISNSGLHHLASLKDLEALNVSHSQVAAPGALKPLCRLRGLKILAVNGCRGMDDTTLHQIQSSLPNLRTVR 556
SL L +++C+N+ VP P LPPD+V + +L A TL + + LDLS + VTD+W+ F T L HL L+ + ITD GL + + L+ L C L + AF S + S++L CR L D AV L+ +L+ L L GC L+D +L A M QL++L + AC + + E+ L+LG+C + + +E+L + P LQ L + R L + L L L L C +S + L + LP L LD SH G+ R Q +P L+++ ++S +RDS + + F LV +NLDSCS + +S L L+ L+RL +AD +S+GGM +AK L+ + LFY IS+ G+R LS L NL L++D+RD+TD+ L++L ++ +L +LD+FS V+D G +++ L L L +CGG I D G EY+S+L LQ LN+S+N I++ G+ H SL L +LN+S + V ++ PL L+ L+ L+V GCRGM D LH +++ LP LR +R
Sbjct: 63 SLATLAAEAVCRNLATSTVPLPG--PLPPDVVEELTTTLRMTLAYNPTTLEAFQDNEWMHLDLSQVRNSVTDEWIHRFLGGRIKRSIQDTSPTTAYLKHLDLS-GSQITDEGLSAMGRMVFLETVVLDQCHYLMGSEDCRAFHVFASPRLQSVSLQDCRRLEDAAVLALSLYGRDSLRALNLSGCRCLTDQSLVACGT-MWQLESLQLEACDMITDAGLERL--HHLELAELNLGWCTK-ISDRGMELLLQQHMP--LQRLRVARCRMLKQPEWLYL-ICSTLSDLDLTGCLQLSSSSLGKTLQGLPHLLH-LDVSHIPGIIRSGWQGRVPKLQTLVLSYSAVRDSHLTKWSDFRELVELNLDSCSNVSDSSLRHLVSAAPNLQRLVVADCAISDGGMVHIAKFKQLTHLDLFYCQISNRGLRCLSELTNLQVLSIDSRDVTDSGLIYLQNIKQLVQLDLFSGHVTDRGCQYLSHLTSLESLALCGGGIGDIGCEYLSRLIRLQHLNLSENEDITDQGIAHFKSLSQLRSLNISQTSVT---SVMPLASLKQLQSLSVYGCRGMAD--LHSLETKLPKLRCLR 629
BLAST of EWM21918.1 vs. NCBI_GenBank
Match: gi|219122964|ref|XP_002181805.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407081|gb|EEC47019.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 221.09 bits (562), Expect = 7.015e-62 Identity = 178/545 (32.66%), Postives = 269/545 (49.36%), Query Frame = 0
Query: 27 LPPDLVRRIFDSLTSHKALTKLTLLPLRYCDVTRLDLSPCKGVTDQWLRPFTDKT-----------LTHLCLAFC-------------NAITDAGLLNLTELGGLQVADLTACAGLRTGGLAAFRESWSMTSLTLNGCRNLTDEAVKPLAYLSALQHLRLRGCWQLSDAALNALAPLMPQLKTLDVNACRQFSSTSISFCVGKMREIRHLDLGYCPRGVGGGALEVLTRGPAPTTLQVLILDSSRSLSNADLFSLGKFRCLQRLSLRNCTTISDAGLCQL------PSSLETLDASHC----RGVRRLPAQSLPCLRSVNFAHSGLRDSDVGSLAVFPALVNINLDSCSIGNSGLVSLLP---LKKLKRLNLADTGVSNGGMDVLAKLSSLSVISLFYTSISDSGVRQLSVLQNLTDLNLDNRDLTDTSLLHLSSLTKLRRLDMFSSRVSDVGLCFITSLVELVDLEICGGRITDKGLEYISQLPSLQRLNVSQNVQISNSGLHHLASLKDLEALNVSHSQVAAPGALKPLCRLRGLKILAVNGC 534
LP D+V I SL H AL TL LR C++ L LS C+GVTD+WL + ++ + H C A +TD GL+ L +LG L+VA L C + GL S + +L+L CR LTDEA+ +++L +LQ L ++ CR + S++ + M +R L L C ++N L +L + LQ +SL C +SDAG+ L S+L+ L + C GV+ L + ++++ +S ++D + L P L +NLDSC IG+ + L L L+LAD+ +S+ GM +AK + L +SLFY SIS+ G+R LS+L L LNLD+RD++D L HL L +L+ LD+FS RV+D+G +++ + L LE+CGG + D G +++L +L LN+SQN +I+N G LA+L L+ALN+SH++V A AL+ L L+ LA+ GC
Sbjct: 1 LPQDVVDDILQSLIRHSALNATTLRILRNCELGVLSLSGCRGVTDEWLEALSAESSDSPPHLRTALMWHPCAASSALTNTTLLDLRGSQRLTDRGLMQLHDLGRLEVAKLDNCHSVVGRGLVVLSSSPRLHTLSLTNCRRLTDEAIVNISHLQSLQ--------------------------ALSLDGCRCITDFSLA-ALADMYNLRKLGLSQCDL-----------------------------ITNEGLKALEHLQRLQEISLGWCRQVSDAGIQTLTAQPGRSSNLQILRLARCPITDEGVQYLG--KIRNVKTLELCYSAVKDIHLTKLVNLPMLEELNLDSCPIGDLAIQHFANHNVLPNLVSLDLADSDISDLGMVQIAKFTKLKRLSLFYCSISNRGLRHLSILTELRVLNLDSRDISDDGLRHLQHLKQLKSLDIFSGRVTDLGCTYLSKIKTLESLELCGGGVRDAGCASLAKLENLTSLNLSQNERITNRGAAALAALSKLKALNLSHTRVNAS-ALRYFSGLMNLQSLALYGC 486
BLAST of EWM21918.1 vs. NCBI_GenBank
Match: gi|1072236393|gb|OEU21121.1| (RNI-like protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 226.868 bits (577), Expect = 3.214e-61 Identity = 179/475 (37.68%), Postives = 276/475 (58.11%), Query Frame = 0
Query: 93 ITDAGLLNLTELGGLQVADLTACAGLRTGGLAAFRESWSMTSLTLNGCRNLTDEAVKPLAYLSALQHLRLRGCWQLSDAALNALAPLMPQLKTLDVNACRQFSSTSISFCVGKMREIRHLDLGYCPRGVGGGALEVLTRGPAPTTLQVLILDSSR-SLSNADLFSLGKFRCLQRLSLRNCTTISDAGLCQLP---SSLETLDASHCRGVRRLPAQ-SLPCLRSVNFAHSGLRDSDVGSLAVFPALVNINLDSCSIGN---SGLVSLLPLKKLKRLNLADTGVSNGGMDVLAKLSSLSVISLFYTSISDSGVRQLSVLQNLTDLNLDNRDLTDTSLLHLSSLTKLRRLDMFSSRVSDVGLCFITSLVELVDLEICGGRITDKGLEYISQLPSLQRLNVSQNVQISNSGLHHLASLKDLEALNVSHSQVAAPGALKPLCRLRGLKILAVNGCRGMDDT---TLHQIQSSLPNLRTVR 556
+TD GLL L++L L++A L C ++ GL AF S + +L+L CR L+DEA+ +++L +L+ L L GC L+D +L A+ L+ ++K LD++ C + T + + ++ I L LG+C R + +E+L + + IL +R +++ + L L+ L L C+ I + L + LE LD S+C G+ R Q + L++++ +S +RDS + L AL INLDSC IG+ S L + L L+LADT +S+ GM LAK L +SLFY +++++ +R L+ L NL LNLD+R++ D L HL SL L+ LD+FS RV+D G C I + L LE+CGG +TD G ++ L +L LN+SQN +I+N G LA+L +L+ALN+S+++V + GAL L LK LA+ GC+GM +T L ++QS LPNL+ VR
Sbjct: 307 LTDKGLLQLSDLSSLKIAKLDNCHSIQGRGLVAFSRSHHLHTLSLANCRRLSDEAIINISHLISLEALSLDGCRCLTDRSLAAIGNLI-RIKKLDLSQCDLITDTGLQE-LEHIQNIEELSLGWC-RSITDDGIELLANQLGRSK-NMRILSVARIPITDTGIKHLSLLSALEELDLNGCSNIGSSSLGNTLAKLTKLERLDVSYCPGILRSSWQGKIKSLKTLDACYSAVRDSHISRLTDLSALEEINLDSCPIGDWTISHLADNTVVPNLVSLDLADTDLSDLGMVHLAKFKKLKRLSLFYCNLTNASLRHLTSLSNLEVLNLDSREIGDNGLWHLRSLQNLKSLDIFSGRVTDTGCCHIAQIKSLESLELCGGGVTDTGCSILAALENLISLNLSQNERITNRGAAALAALSNLKALNLSNTRVNS-GALIHFSDLMNLKSLALYGCQGMKETRNDMLDRLQSGLPNLKCVR 776
BLAST of EWM21918.1 vs. NCBI_GenBank
Match: gi|698502162|ref|XP_009796748.1| (PREDICTED: F-box/LRR-repeat protein 14 isoform X1 [Nicotiana sylvestris] >gi|1025325270|ref|XP_016504875.1| PREDICTED: F-box/LRR-repeat protein 14-like isoform X1 [Nicotiana tabacum]) HSP 1 Score: 211.46 bits (537), Expect = 2.094e-57 Identity = 183/570 (32.11%), Postives = 290/570 (50.88%), Query Frame = 0
Query: 2 SLIDLCIDSICQNILCYEVPPSFDVLPPDLVRRIFDSLTSHKALTKLTLLPLRYCDVTRLDLSPCKGVTDQWLRPFTDKTLTHLCLAF-CNAITDAGLLNLTELGGLQVADLTACAGLRTGGLAAFRESWSMTSLTLNGCRNLTDEAVKPLAYLSALQHLRLRGCWQLSDAALNALAPLMPQLKTLDVNACRQFSSTSISFCVGKMREIRHLDLGYCPRGVGGGALEVLTRGPAPTTLQVLILDSSRSLSNADLFSLGKFRCLQRLSLRNCTTISDAGLCQLPSSLETLDASHC-------------RGVRRLPAQSLPCLRSVNFAHSGLRDSDVGSLAVFPALVNINLDSCSIGNSGLVSLLPLKKLKRLNLADTGVSNGGMDVLAKLSSLSVISLFYTSISDSGVRQLSVLQNLTDLNLDNRDLTDTSLLHLSSLTKLRRLDMFSSRVSDVGLCFITSLVELVDLEICGGRITDKGLEYISQLPSLQRLNVSQNVQISNSGLHHLASLKDLEALNVSHSQVAAPGALKPLCRLRGLKILAVNGCRGMDDTTLHQIQSS-LPNLRTVR 556
SL++LCI IC++I Y +F VLP D+ ++IFD L + LT ++L R C + LD+ G+ DQW+ + + + L L + +TD+GL NL + LQ +L LN C +TD V+ ++ LS L L R L+ ++ALA L+ LK LD+ C + + + + + L++ C + ++ L T L+VL + SS+ F + L++L+L N C LE+L A H G + SL L+ +N + + D+ + L F L ++NLDSC I + GL++L L +LK L L+DT V N G+ L+ L +L ++L +T ++DSG+R+L L +L LNLD R +TDT L L+SLT L LD+F +R++D G ++ L LEICGG +TD G++ I L SL LN+SQN +++ L ++ L L +LNVS+S++ + G L+ L +L+ LK L + C+ + + ++QS+ LPNL R
Sbjct: 54 SLMELCIRKICEDIDKYN---TFSVLPRDISQQIFDELVGTQRLTDVSLEAFRDCALQDLDMGEYPGLNDQWMDVISSQGPSLLSLDVSASDVTDSGLTNLKDCKNLQ-------------------------ALNLNYCDQITDRGVENISGLSNLTTLSFRRNNILTAQGMSALAELINLLK-LDLERCPKIHGGMVH--LKGLTRLESLNIN-CCNCITDSDMKPL---AGLTNLKVLQISSSKVTDYGVTF----LKALEKLTLLNMEGCPVTAAC-----LESLSALHALLYLNLSRCCLTDDGCEKFS--SLQSLKVLNLGFNEITDAILVHLKGFTNLESLNLDSCRIKDEGLINLSGLHRLKSLELSDTEVGNNGIRHLSGLRNLDSLNLSFTVVTDSGLRKLCGLSSLRSLNLDARQITDTGLAALTSLTGLTHLDLFGARITDSGTSYLRHFKNLRSLEICGGGLTDAGVKNIKDLTSLTLLNLSQNSHLTDKSLEAISGLTQLVSLNVSNSRITSAG-LQHLKQLKNLKSLTLESCK-VTANDIKKLQSTELPNLVNYR 575
BLAST of EWM21918.1 vs. NCBI_GenBank
Match: gi|661898218|emb|CDO98185.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 209.92 bits (533), Expect = 7.400e-57 Identity = 176/563 (31.26%), Postives = 276/563 (49.02%), Query Frame = 0
Query: 2 SLIDLCIDSICQNILCYEVPPSFDVLPPDLVRRIFDSLTSHKALTKLTLLPLRYCDVTRLDLSPCKGVTDQWLRPFTDKTLTHLCLAFCNA-ITDAGLLNLTELGGLQVADLTACAGLRTGGLAAFRESWSMTSLTLNGCRNLTDEAVKPLAYLSALQHLRLRGCWQLSDAALNALAPLMPQLKTLDVNACRQFSSTSISFCVG--KMREIRHLDLGYCPRGVGG----GALEVLTRGPAPTTLQVLILDSSRSLSNADLFSLGKFRCLQRLSLRNCTTISDAGLCQLPSSLETLDASHCRGVRRLPAQSLPCLRSVNFAHSGLRDSDVGSLAVFPALVNINLDSCSIGNSGLVSLLPLKKLKRLNLADTGVSNGGMDVLAKLSSLSVISLFYTSISDSGVRQLSVLQNLTDLNLDNRDLTDTSLLHLSSLTKLRRLDMFSSRVSDVGLCFITSLVELVDLEICGGRITDKGLEYISQLPSLQRLNVSQNVQISNSGLHHLASLKDLEALNVSHSQVAAPGALKPLCRLRGLKILAVNGCRGMDDTTLHQIQSS-LPNLRTVR 556
SL++LC IC+ I Y SF +LP D+ ++IFD L + L + L R C + L+L G D W+ + + L + F + +TDAGL +L + GLQ + C + G+A +MT+L+ +T + + L+ L L L L C ++ ++ + +L++L++N C + T + G ++ ++ GV LE+L P T A L SL L L+L C D C RL A L+ +N + + D+ + L L ++NLDSCSI + GLV+L L +LK L L+DT V + G+ L+ L +L ++L +T ++D G+R+LS L L LNLD R +TDT L L+SLT L LD+F +R++D G ++ L LEICGG +TD G++ I L SL LN+SQN +++ L ++ L L +LNVS+S+V + G L+ L L+ LK L + C+ + L ++Q++ LPNL R
Sbjct: 55 SLMELCTYKICEAIHNY---GSFSMLPRDVSQQIFDELVYSQRLNDVILQAFRDCALQDLNLGEYPGFNDSWMDMIASQGSSLLSVDFSGSDVTDAGLSHLKDCTGLQALNFNYCDKISDNGMAHISGLSNMTTLSFRRNNMITAQGMSALSGLVNLVKLDLERCPKIHGGLVHLKG--LTKLESLNINCCNCITDTDMKPLQGLANLKALQISSSKVTDHGVNFLKALHKLELLNMEGCPVTA-------------ACLESLSALGALLYLNLSRCNLADDG----------------CDKFSRLQA-----LKVLNLGFNEISDAILVYLKGLTNLESLNLDSCSIRDEGLVNLAGLSRLKCLELSDTEVGSSGLRHLSGLGNLESLNLSFTVVTDGGLRKLSGLSCLRSLNLDVRQITDTGLAALTSLTGLTHLDLFGARITDSGTNYLKCFRNLRSLEICGGGLTDAGVKNIKDLTSLALLNLSQNSHLTDKSLEAISGLTQLVSLNVSNSRVTSAG-LQHLKPLKNLKSLTLESCK-VTANDLKKLQATHLPNLVNFR 576
BLAST of EWM21918.1 vs. NCBI_GenBank
Match: gi|586754442|ref|XP_006852826.1| (F-box/LRR-repeat protein 14 [Amborella trichopoda] >gi|769802012|ref|XP_011626398.1| F-box/LRR-repeat protein 14 [Amborella trichopoda] >gi|769802014|ref|XP_011626399.1| F-box/LRR-repeat protein 14 [Amborella trichopoda] >gi|1173116530|ref|XP_020528072.1| F-box/LRR-repeat protein 14 [Amborella trichopoda] >gi|1173116533|ref|XP_020528073.1| F-box/LRR-repeat protein 14 [Amborella trichopoda] >gi|1173116535|ref|XP_020528074.1| F-box/LRR-repeat protein 14 [Amborella trichopoda] >gi|548856440|gb|ERN14293.1| hypothetical protein AMTR_s00033p00180120 [Amborella trichopoda]) HSP 1 Score: 208.764 bits (530), Expect = 1.648e-56 Identity = 182/567 (32.10%), Postives = 283/567 (49.91%), Query Frame = 0
Query: 2 SLIDLCIDSICQNILCYEVPPSFDVLPPDLVRRIFDSLTSHKALTKLTLLPLRYCDVTRLDLSPCKGVTDQWLRPFTDKTLTHLCLAFCNA-ITDAGLLNLTELGGLQVADLTACAGLRTGGLAAFRESWSMTSLTLNGCRNLTDEAVKPLAYLSALQHLRLRGCWQLSDAALNALAPLMPQLKTLDVNACRQFSSTSISFCVG--KMREI-----RHLDLGY-CPRGVGGGALEVLTRGPAPTTLQVLILDSSRSLSNADLFSLGKFRCLQRLSLRNCTTISDAGLCQLPSSLETLDASHCRGVRRLPAQSLPCLRSVNFAHSGLRDSDVGSLAVFPALVNINLDSCSIGNSGLVSLLPLKKLKRLNLADTGVSNGGMDVLAKLSSLSVISLFYTSISDSGVRQLSVLQNLTDLNLDNRDLTDTSLLHLSSLTKLRRLDMFSSRVSDVGLCFITSLVELVDLEICGGRITDKGLEYISQLPSLQRLNVSQNVQISNSGLHHLASLKDLEALNVSHSQVAAPG--ALKPLCRLRGLKILAVNGCRGMDDTTLHQIQ-SSLPNLRTVR 556
SL++LCI IC+ I Y+ SF +LP DL ++IF+ L + + L ++L + C + + L GV D W+R + + L + + +TD+GL L E LQ + C + GLA ++TSL+ ++T ++ A L L++L L C ++ ++ + +L+ L++ C ++ + G +RE+ + D G C RG+ L VL P T A L +L L L+L C ISD G C+ L L+ +N + + D+ + L L +NLDSC IG+ GL +L +LKRL L+DT V N G+ L+ L +L I+L +T I+DSG+R+LS L +L LNLD R +TD L L+ LT L LD+F +R+SD+G + L LE+CGG ITD L+ I L SL+ LN+SQN +++ L ++ L L +LNVS+S+V G LKP L+ LK L++ C+ + + L ++Q ++LPNL R
Sbjct: 55 SLMELCIRKICEEIKGYK---SFSILPRDLSQQIFNELVNSQGLNDVSLEAFQDCALQDVFLGDYPGVKDSWIRTIASQGPSLLSVDISGSDVTDSGLSLLMECVNLQSLNCNYCDHISDLGLAYLSGLTNLTSLSFKKNNSITAPGMEAFAALINLRNLDLERCSRIHGGLVHLKG--LTRLEYLNIGWCNCITNADMMPLSGLTNLRELQISRSKVTDAGIACLRGMS--KLYVLNIEGCPVT-------------GACLETLSGLGALSYLNLNACG-ISDGG-CE-------------------KFAGLVNLKFLNLGFNNITDTCLVHLKGLTKLEMLNLDSCKIGDEGLNNLEGHVQLKRLELSDTEVGNNGLRHLSVLRNLESINLSFTQITDSGLRRLSGLTSLKSLNLDTRQITDAGLAALTGLTGLTHLDLFGARISDIGTSCLRYFKNLESLELCGGLITDDALKNIKDLTSLRLLNLSQNCNLTDKALESISGLTALVSLNVSNSRVTNAGLHHLKP---LKNLKSLSLEACK-VTASELKKLQMTALPNLVNYR 576
BLAST of EWM21918.1 vs. NCBI_GenBank
Match: gi|1044540566|ref|XP_017441025.1| (PREDICTED: F-box/LRR-repeat protein 14 [Vigna angularis]) HSP 1 Score: 208.764 bits (530), Expect = 1.784e-56 Identity = 166/566 (29.33%), Postives = 290/566 (51.24%), Query Frame = 0
Query: 2 SLIDLCIDSICQNILCYEVPPSFDVLPPDLVRRIFDSLTSHKALTKLTLLPLRYCDVTRLDLSPCKGVTDQWLRPFTDKTLTHLCLAFCNAITDAGLLNLTELGGLQVADLTACAGLRTGGLAAFRESWSMTSLTLNGCRNLTDEAVKPLAYLSALQHLRLRGCWQLSDAALNALAPLMPQLKTLDVNACRQFSSTSISFCVGKMREIRHLDLGYCPRGVGGGALEVLTRGPAPTTLQVLILDSSRSLSNADLFSLG--KFRCLQRLSLRNCTTISDAGLC----QLPSSLETLDASHC----RGVRRLPAQSLPCLRSVNFAHSGLRDSDVGSLAVFPALVNINLDSCSIGNSGLVSLLPLKKLKRLNLADTGVSNGGMDVLAKLSSLSVISLFYTSISDSGVRQLSVLQNLTDLNLDNRDLTDTSLLHLSSLTKLRRLDMFSSRVSDVGLCFITSLVELVDLEICGGRITDKGLEYISQLPSLQRLNVSQNVQISNSGLHHLASLKDLEALNVSHSQVAAPGALKPLCRLRGLKILAVNGCRGMDDTTLHQIQSS-LPNLRTVR 556
SL+DLCI+ I ++ YE SF +LP D+ ++IF+ L LT+ +L R C + +DL GV D W+ + + L+ L + ++ G QV D GL ++ ++ +LTLN C ++ +K ++ LS L L +R + + A + L L+ LD+ C + + + ++++ L++G C + +T + +++ L +SN+ + +G R L++L+ N + G C +SL L+ S C G ++ L L+ ++ A + + D+ + L L +NLDSC IG+ GL +L L LK L L+DT + N G L+ L+ L ++L +T+++D+G+++LS L L LNLD R +TD L +L L+ L LD+F + +SD G ++ S L LEICGG +TD G++ I ++ SL +LN+SQN +++ L ++ + L +LNVS+S++ G L+ L L+ L+ L + C+ + + + ++QS+ LPNL + R
Sbjct: 57 SLMDLCINRIREDFHKYE---SFSILPRDISQQIFNELVDSHCLTEASLEAFRDCALQDIDLGEYSGVDDNWMDVISSQGLSLLSV---------------DVSGSQVTD---------NGLRLLKDCSNLQALTLNYCDQFSEYGLKHISGLSNLDSLSIRKSSSVKPDGMRAFSNLF-NLEKLDLERCSEIHGGFVH--LKGLKKLEFLNIGCC---------KCVTDSDMKSISELINL-KELHISNSSITDIGISYLRGLEKLTTLNVEGCNITGACLESIHALASLACLNLSRCGLSNDGFEKIAG--LKSLKRLSLAFNRITDASLVHLKGLTNLEYLNLDSCRIGDDGLANLTGLTLLKSLVLSDTDIGNSGTKYLSSLNKLEDLNLSFTTVTDNGLKRLSRLTQLKSLNLDTRLITDNGLSNLIGLSGLVTLDLFGAHISDHGTAYLRSFKNLQSLEICGGGLTDDGVKNIREIVSLTQLNLSQNCNLTDKTLELISGMTALRSLNVSNSRI-TNGGLRYLKPLKNLRSLTLESCK-VTASEIKKLQSTDLPNLISFR 578
BLAST of EWM21918.1 vs. NCBI_GenBank
Match: gi|965659852|dbj|BAT76271.1| (hypothetical protein VIGAN_01424900 [Vigna angularis var. angularis]) HSP 1 Score: 207.994 bits (528), Expect = 3.200e-56 Identity = 165/566 (29.15%), Postives = 291/566 (51.41%), Query Frame = 0
Query: 2 SLIDLCIDSICQNILCYEVPPSFDVLPPDLVRRIFDSLTSHKALTKLTLLPLRYCDVTRLDLSPCKGVTDQWLRPFTDKTLTHLCLAFCNAITDAGLLNLTELGGLQVADLTACAGLRTGGLAAFRESWSMTSLTLNGCRNLTDEAVKPLAYLSALQHLRLRGCWQLSDAALNALAPLMPQLKTLDVNACRQFSSTSISFCVGKMREIRHLDLGYCPRGVGGGALEVLTRGPAPTTLQVLILDSSRSLSNADLFSLG--KFRCLQRLSLRNCTTISDAGLC----QLPSSLETLDASHC----RGVRRLPAQSLPCLRSVNFAHSGLRDSDVGSLAVFPALVNINLDSCSIGNSGLVSLLPLKKLKRLNLADTGVSNGGMDVLAKLSSLSVISLFYTSISDSGVRQLSVLQNLTDLNLDNRDLTDTSLLHLSSLTKLRRLDMFSSRVSDVGLCFITSLVELVDLEICGGRITDKGLEYISQLPSLQRLNVSQNVQISNSGLHHLASLKDLEALNVSHSQVAAPGALKPLCRLRGLKILAVNGCRGMDDTTLHQIQSS-LPNLRTVR 556
SL+DLCI+ I ++ YE SF +LP D+ ++IF+ L LT+ +L R C + +DL GV D W+ + + L+ L + ++ G QV D GL ++ ++ +LTLN C ++ +K ++ LS L L +R + + A + L L+ LD+ C + + + ++++ L++G C + +T + +++ L +SN+ + +G R L++L+ N + G C +SL L+ S C G ++ L L+ ++ A + + D+ + L L +NLDSC IG+ GL +L L LK L L+DT + N G+ ++ L+ L ++L +T+++D+G+++LS L L LNLD R +TD L +L L+ L LD+F + +SD G ++ S L LEICGG +TD G++ I ++ SL +LN+SQN +++ L ++ + L +LNVS+S++ G L+ L L+ L+ L + C+ + + + ++QS+ LPNL + R
Sbjct: 57 SLMDLCINRIREDFHKYE---SFSILPRDISQQIFNELVDSHCLTEASLEAFRDCALQDIDLGEYSGVDDNWMDVISSQGLSLLSV---------------DVSGSQVTD---------NGLRLLKDCSNLQALTLNYCDQFSEYGLKHISGLSNLDSLSIRKSSSVKPDGMRAFSNLF-NLEKLDLERCSEIHGGFVH--LKGLKKLEFLNIGCC---------KCVTDSDMKSISELINL-KELHISNSSITDIGISYLRGLEKLTTLNVEGCNITGACLESIHALASLACLNLSRCGLSNDGFEKIAG--LKSLKRLSLAFNRITDASLVHLKGLTNLEYLNLDSCRIGDDGLANLTGLTLLKSLVLSDTDIGNSGLRYISGLNKLEDLNLSFTTVTDNGLKRLSRLTQLKSLNLDTRLITDNGLSNLIGLSGLVTLDLFGAHISDHGTAYLRSFKNLQSLEICGGGLTDDGVKNIREIVSLTQLNLSQNCNLTDKTLELISGMTALRSLNVSNSRI-TNGGLRYLKPLKNLRSLTLESCK-VTVSEIKKLQSTDLPNLISFR 578 The following BLAST results are available for this feature:
BLAST of EWM21918.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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