EWM21901.1, cds8754 (CDS) Nannochloropsis gaditana

Overview
NameEWM21901.1
Unique Namecds8754
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:153231..154185 -
Alignment locationKK037250.1:152992..153164 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21901.1
Productchaperone protein
Orig transcript idgnl|cribi|Naga_100070g9.4215.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:153231..154185 -
KK037250.1supercontigKK037250.1:152992..153164 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR001623DnaJ_domain
Homology
BLAST of EWM21901.1 vs. NCBI_GenBank
Match: gi|585102247|gb|EWM21901.1| (chaperone protein [Nannochloropsis gaditana])

HSP 1 Score: 757.288 bits (1954), Expect = 0.000e+0
Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0
Query:    1 MKMRLEDAYEVLEIRVGASEEEVRRAFRVKALATHPDRNPDKPDAKAAFQRVSNAYKRITAPDEGEDEGESEDEGEEYMAEEDLFELFESMFGPRRVPFGVARRDPMGETAFQMMFKSGGPFGRFDLFDGGDSSGDYEESCDSEEISYDVELEESESEGDNKLDTFHEILFLQHLMSDGGHSRYGGRGSGRVFDEDDAFDYGNIEVTRRAQSGHGREADNRRGRNRPGSPPARRARDEFHRQGPAARPHPAPHGAVPASCTSGVRDHLDGKEQRKCEPSQSAKRRARRMKARQAGIGVSTSRSDGKREASASAASKTAQKASFRTSAPRSDTLAWVLVKLSSGAFSSAFVSPSVRHDEASEKSAIAVIGDAGPKK 375
            MKMRLEDAYEVLEIRVGASEEEVRRAFRVKALATHPDRNPDKPDAKAAFQRVSNAYKRITAPDEGEDEGESEDEGEEYMAEEDLFELFESMFGPRRVPFGVARRDPMGETAFQMMFKSGGPFGRFDLFDGGDSSGDYEESCDSEEISYDVELEESESEGDNKLDTFHEILFLQHLMSDGGHSRYGGRGSGRVFDEDDAFDYGNIEVTRRAQSGHGREADNRRGRNRPGSPPARRARDEFHRQGPAARPHPAPHGAVPASCTSGVRDHLDGKEQRKCEPSQSAKRRARRMKARQAGIGVSTSRSDGKREASASAASKTAQKASFRTSAPRSDTLAWVLVKLSSGAFSSAFVSPSVRHDEASEKSAIAVIGDAGPKK
Sbjct:    1 MKMRLEDAYEVLEIRVGASEEEVRRAFRVKALATHPDRNPDKPDAKAAFQRVSNAYKRITAPDEGEDEGESEDEGEEYMAEEDLFELFESMFGPRRVPFGVARRDPMGETAFQMMFKSGGPFGRFDLFDGGDSSGDYEESCDSEEISYDVELEESESEGDNKLDTFHEILFLQHLMSDGGHSRYGGRGSGRVFDEDDAFDYGNIEVTRRAQSGHGREADNRRGRNRPGSPPARRARDEFHRQGPAARPHPAPHGAVPASCTSGVRDHLDGKEQRKCEPSQSAKRRARRMKARQAGIGVSTSRSDGKREASASAASKTAQKASFRTSAPRSDTLAWVLVKLSSGAFSSAFVSPSVRHDEASEKSAIAVIGDAGPKK 375          
BLAST of EWM21901.1 vs. NCBI_GenBank
Match: gi|302307349|ref|NP_983985.2| (ADL111Wp [Eremothecium gossypii ATCC 10895] >gi|299788958|gb|AAS51809.2| ADL111Wp [Ashbya gossypii ATCC 10895] >gi|374107199|gb|AEY96107.1| FADL111Wp [Eremothecium gossypii FDAG1])

HSP 1 Score: 80.8777 bits (198), Expect = 5.182e-13
Identity = 50/139 (35.97%), Postives = 81/139 (58.27%), Query Frame = 0
Query:    9 YEVLEIRVGASEEEVRRAFRVKALATHPDRNPDKPDAKAAFQRVSNAYKRITAPD---EGEDEGESEDEGEEYMAEEDLFELFESMFGPRRVPFGVARRDPMGETAFQMMFKSGGPFGRFDLFDGGDSSGDYEESCDSE 144
            Y++L +   AS E++++A+R KA+ THPD+NP+ PDA+A FQ VS AYK ++ PD      + G S++ GE  M EED FE+  ++FG      G + +  +GE +F           + +LF+  D   ++ ES D++
Sbjct:    8 YDILGVTPSASAEQIKKAYRKKAIQTHPDKNPNDPDAQAKFQEVSKAYKVLSDPDLKNRYNEFGLSDERGEMVM-EEDPFEMLMAVFG------GDSFQQWIGEYSFLRNL-----MKQTELFECEDEDDEHGESQDNK 134          
BLAST of EWM21901.1 vs. NCBI_GenBank
Match: gi|513031657|gb|AGO11666.1| (AaceriADL111Wp [Saccharomycetaceae sp. 'Ashbya aceri'])

HSP 1 Score: 80.8777 bits (198), Expect = 5.848e-13
Identity = 50/139 (35.97%), Postives = 81/139 (58.27%), Query Frame = 0
Query:    9 YEVLEIRVGASEEEVRRAFRVKALATHPDRNPDKPDAKAAFQRVSNAYKRITAPD---EGEDEGESEDEGEEYMAEEDLFELFESMFGPRRVPFGVARRDPMGETAFQMMFKSGGPFGRFDLFDGGDSSGDYEESCDSE 144
            Y++L +   AS E++++A+R KA+ THPD+NP+ PDA+A FQ VS AYK ++ PD      + G S++ GE  M EED FE+  ++FG      G + +  +GE +F           + +LF+  D   ++ ES D++
Sbjct:    8 YDILGVTPSASAEQIKKAYRKKAIQTHPDKNPNDPDAQAKFQEVSKAYKVLSDPDLKSRYNEFGLSDERGEMVM-EEDPFEMLMAVFG------GDSFQQWIGEYSFLRNL-----MKQTELFECEDEDDEHGESQDNK 134          
BLAST of EWM21901.1 vs. NCBI_GenBank
Match: gi|1173947664|gb|OQR95885.1| (hypothetical protein THRCLA_07492 [Thraustotheca clavata])

HSP 1 Score: 74.3294 bits (181), Expect = 2.056e-11
Identity = 42/92 (45.65%), Postives = 59/92 (64.13%), Query Frame = 0
Query:    3 MRLEDAYEVLEIRVGASEEEVRRAFRVKALATHPDRNPDKPDAKAAFQRVSNAYKRITAPDEG-EDEGESEDEGEEYMAEEDLFELFESMFG 93
            M+L +AY  L +   AS +EVR A++  AL  HPD+NP++ D  A FQ +S AYKRI+ P    EDE  S  +G ++  EE +F++FE MFG
Sbjct:    1 MKLVEAYRTLGLEASASADEVRLAYKKLALKYHPDKNPNE-DTTAMFQSISAAYKRISDPKSNQEDESFSGFDGMDFPMEE-MFQMFEMMFG 90          
BLAST of EWM21901.1 vs. NCBI_GenBank
Match: gi|363752057|ref|XP_003646245.1| (hypothetical protein Ecym_4372 [Eremothecium cymbalariae DBVPG#7215] >gi|356889880|gb|AET39428.1| hypothetical protein Ecym_4372 [Eremothecium cymbalariae DBVPG#7215])

HSP 1 Score: 75.8702 bits (185), Expect = 2.605e-11
Identity = 43/109 (39.45%), Postives = 69/109 (63.30%), Query Frame = 0
Query:    9 YEVLEIRVGASEEEVRRAFRVKALATHPDRNPDKPDAKAAFQRVSNAYKRITAPDEGE-----DEGESEDEGEEYMAEEDLFELFESMFGPRRVPFGVARRDPMGETAF 112
            Y+VL ++  A+ E++++A+R KA+ THPD+NP+ P+A+A FQ VS AYK ++   +GE     DE    DE  + M EED FE+  ++FG      G + ++ +GE +F
Sbjct:    8 YDVLGVQPDATAEQIKKAYRKKAIQTHPDKNPNDPEAQAKFQEVSKAYKVLS---DGELRSRYDEVGLSDERGDVMMEEDPFEMLMAVFG------GDSFQEWIGEYSF 107          
BLAST of EWM21901.1 vs. NCBI_GenBank
Match: gi|673018456|ref|XP_008863189.1| (hypothetical protein H310_01739 [Aphanomyces invadans] >gi|574482392|gb|ETW09384.1| hypothetical protein H310_01739 [Aphanomyces invadans])

HSP 1 Score: 70.0922 bits (170), Expect = 7.160e-10
Identity = 35/85 (41.18%), Postives = 51/85 (60.00%), Query Frame = 0
Query:    8 AYEVLEIRVGASEEEVRRAFRVKALATHPDRNPDKPDAKAAFQRVSNAYKRITAPDEGEDEGESEDEGEEYMAEEDLFELFESMF 92
            AY  L +  GAS +EVR A++  AL  HPD+N D  D    FQR+S AYK I+ P + + +GE   +  +  A ED  ++F++MF
Sbjct:    6 AYRTLGLAPGASNDEVRLAYKRLALQYHPDKNRDGIDTTEVFQRISAAYKHISDPPQDQHDGEMGSDFHDAAAFEDFMQMFDAMF 90          
BLAST of EWM21901.1 vs. NCBI_GenBank
Match: gi|589275976|ref|XP_007003718.1| (hypothetical protein TREMEDRAFT_68250 [Tremella mesenterica DSM 1558] >gi|392577734|gb|EIW70863.1| hypothetical protein TREMEDRAFT_68250 [Tremella mesenterica DSM 1558])

HSP 1 Score: 69.707 bits (169), Expect = 1.821e-9
Identity = 34/85 (40.00%), Postives = 52/85 (61.18%), Query Frame = 0
Query:    9 YEVLEIRVGASEEEVRRAFRVKALATHPDRNPDKPDAKAAFQRVSNAYKRITAPDEGEDEGESEDEGEEYMAEEDLFELFESMFG 93
            Y++LEI V A E E++RA++ KA+  HPD+NPD P A   FQ++  AY+ ++ P+  E   +   +G       D+ +LF SMFG
Sbjct:    8 YDLLEIHVTADEGEIKRAYKRKAMQHHPDKNPDDPLAHETFQKIGQAYETLSDPNLRESYDKYGPDGPSSSHGADMDDLFASMFG 92          
BLAST of EWM21901.1 vs. NCBI_GenBank
Match: gi|1062151166|gb|ODN97786.1| (chaperone regulator [Cryptococcus depauperatus CBS 7855])

HSP 1 Score: 68.1662 bits (165), Expect = 6.211e-9
Identity = 33/89 (37.08%), Postives = 55/89 (61.80%), Query Frame = 0
Query:    9 YEVLEIRVGASEEEVRRAFRVKALATHPDRNPDKPDAKAAFQRVSNAYKRITAPDEGEDEGESEDEGEE----YMAEEDLFELFESMFG 93
            Y++L + V A+E E+++A++ KA+  HPD+NPD P+A   FQR+  AY+ ++ P++     +   EG        +E D+ +LF SMFG
Sbjct:    8 YDILGVSVDATEIEIKKAYKKKAMQHHPDKNPDSPEAHETFQRIGQAYETLSNPNDRTTYDQFGPEGAPRGGGMPSEMDMEDLFASMFG 96          
BLAST of EWM21901.1 vs. NCBI_GenBank
Match: gi|1062135855|gb|ODN82574.1| (chaperone regulator [Cryptococcus depauperatus CBS 7841])

HSP 1 Score: 68.1662 bits (165), Expect = 6.324e-9
Identity = 33/89 (37.08%), Postives = 55/89 (61.80%), Query Frame = 0
Query:    9 YEVLEIRVGASEEEVRRAFRVKALATHPDRNPDKPDAKAAFQRVSNAYKRITAPDEGEDEGESEDEGEE----YMAEEDLFELFESMFG 93
            Y++L + V A+E E+++A++ KA+  HPD+NPD P+A   FQR+  AY+ ++ P++     +   EG        +E D+ +LF SMFG
Sbjct:    8 YDILGVSVDATEIEIKKAYKKKAMQHHPDKNPDSPEAHETFQRIGQAYETLSNPNDRTTYDQFGPEGAPRGGGMPSEMDMEDLFASMFG 96          
BLAST of EWM21901.1 vs. NCBI_GenBank
Match: gi|655139957|ref|WP_028586819.1| (molecular chaperone DnaJ [Desulfocurvus vexinensis])

HSP 1 Score: 67.781 bits (164), Expect = 6.800e-9
Identity = 43/110 (39.09%), Postives = 59/110 (53.64%), Query Frame = 0
Query:    3 MRLEDAYEVLEIRVGASEEEVRRAFRVKALATHPDRNPDKPDAKAAFQRVSNAYKRITAPDEGE------DEGESEDEGEEYMAEEDLFELFESMFGPRRVPFGVARRDP 106
            M   D YEVL +  GAS++EV+RA+R KA   HPDRNPD P+A+A F+  + AY  +  PD+         EG   +    +   +D+F  F  +FG     FG A R P
Sbjct:    1 MAKADYYEVLGVERGASDDEVKRAYRKKAFEFHPDRNPDDPEAEARFKEAAEAYDVLRDPDKRARYDRFGHEGLGGNGYHGFSNADDIFSSFSDIFG-DLFGFGAASRGP 109          
The following BLAST results are available for this feature:
BLAST of EWM21901.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102247|gb|EWM21901.1|0.000e+0100.00chaperone protein [Nannochloropsis gaditana][more]
gi|302307349|ref|NP_983985.2|5.182e-1335.97ADL111Wp [Eremothecium gossypii ATCC 10895] >gi|29... [more]
gi|513031657|gb|AGO11666.1|5.848e-1335.97AaceriADL111Wp [Saccharomycetaceae sp. 'Ashbya ace... [more]
gi|1173947664|gb|OQR95885.1|2.056e-1145.65hypothetical protein THRCLA_07492 [Thraustotheca c... [more]
gi|363752057|ref|XP_003646245.1|2.605e-1139.45hypothetical protein Ecym_4372 [Eremothecium cymba... [more]
gi|673018456|ref|XP_008863189.1|7.160e-1041.18hypothetical protein H310_01739 [Aphanomyces invad... [more]
gi|589275976|ref|XP_007003718.1|1.821e-940.00hypothetical protein TREMEDRAFT_68250 [Tremella me... [more]
gi|1062151166|gb|ODN97786.1|6.211e-937.08chaperone regulator [Cryptococcus depauperatus CBS... [more]
gi|1062135855|gb|ODN82574.1|6.324e-937.08chaperone regulator [Cryptococcus depauperatus CBS... [more]
gi|655139957|ref|WP_028586819.1|6.800e-939.09molecular chaperone DnaJ [Desulfocurvus vexinensis... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8784rna8784Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications