EWM29827.1, cds875 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29827.1 vs. NCBI_GenBank
Match: gi|585112408|gb|EWM29827.1| (hypothetical protein Naga_100017g67 [Nannochloropsis gaditana]) HSP 1 Score: 475.707 bits (1223), Expect = 1.036e-169 Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0
Query: 1 MECSPPSQSKSPRPTEPPLLLYGAASVVGLLTLGSLPFLVIPMLRGNALPYMNIPMSKYKTIFDEVLPRHMPRRRAGSPPLRFIDLGHGMGEAVVNAAQRGYIATGVELNPTLYLLSICNVWRHGLLWPLEPRVRLVYGNMWRKDMELGRQDVILMFGVQSLMTRLAERLRSEAQHDALVVLYRFKLDLRSRASPTGAALREITGRDGSDEQAEIKILEVTEDGFSVYRIKKK 233
MECSPPSQSKSPRPTEPPLLLYGAASVVGLLTLGSLPFLVIPMLRGNALPYMNIPMSKYKTIFDEVLPRHMPRRRAGSPPLRFIDLGHGMGEAVVNAAQRGYIATGVELNPTLYLLSICNVWRHGLLWPLEPRVRLVYGNMWRKDMELGRQDVILMFGVQSLMTRLAERLRSEAQHDALVVLYRFKLDLRSRASPTGAALREITGRDGSDEQAEIKILEVTEDGFSVYRIKKK
Sbjct: 1 MECSPPSQSKSPRPTEPPLLLYGAASVVGLLTLGSLPFLVIPMLRGNALPYMNIPMSKYKTIFDEVLPRHMPRRRAGSPPLRFIDLGHGMGEAVVNAAQRGYIATGVELNPTLYLLSICNVWRHGLLWPLEPRVRLVYGNMWRKDMELGRQDVILMFGVQSLMTRLAERLRSEAQHDALVVLYRFKLDLRSRASPTGAALREITGRDGSDEQAEIKILEVTEDGFSVYRIKKK 233
BLAST of EWM29827.1 vs. NCBI_GenBank
Match: gi|923135501|ref|XP_013761216.1| (hypothetical protein AMSG_02195 [Thecamonas trahens ATCC 50062] >gi|906562937|gb|KNC56180.1| hypothetical protein AMSG_02195 [Thecamonas trahens ATCC 50062]) HSP 1 Score: 87.8113 bits (216), Expect = 1.644e-17 Identity = 53/168 (31.55%), Postives = 90/168 (53.57%), Query Frame = 0
Query: 20 LLYGAASVVGLLTLGSLPFLVIPMLRGNALPYMNIPMSKYKTIFDEVLPRHMPRRRAGSPPLRFIDLGHGMGEAVVNAAQRGYIATGVELNPTLYLLSICNVWRHGLLWPLEPRVRLVYGNMWRKDMELGRQDVILMFGVQSLMTRLAERLRSEAQHDALVVLYRFKL 187
+L G A+V G++ + PFL P+ R +PY+ ++ + + D++ PR G+ R +DLG G G V+ AA+RG +ATG E+N L L S WR G+ + ++W+ D L D I++FGV ++ ++ +L++E +A V+ RFK+
Sbjct: 24 VLLGCAAVTGVMAALAAPFLT-PVFRKFTIPYVPAAPTQVRMVLDQI-----PRLDKGA---RVVDLGSGDGRVVIAAAKRGAMATGYEINYWLVLYSRWRAWREGVW----AQTTFRKADLWKTD--LSGFDAIVVFGVAEMLAQMESKLKAELADNAQVIACRFKM 176
BLAST of EWM29827.1 vs. NCBI_GenBank
Match: gi|1160131416|ref|XP_020391212.1| (protein FAM173B [Rhincodon typus]) HSP 1 Score: 79.7221 bits (195), Expect = 1.149e-14 Identity = 58/178 (32.58%), Postives = 89/178 (50.00%), Query Frame = 0
Query: 9 SKSPRPTEPPLLLYGAASVVGL-LTLGSLPFLVIPMLRGNALPYMNIPMSKYKTIFDEVLPRHMPRRRAGSPPLRFIDLGHGMGEAVVNAAQRGYIATGVELNPTLYLLSICNVWRHGLLWPLEPRVRLVYGNMWRKDMELGRQDVILMFGVQSLMTRLAERLRSEAQHDALVVLYRF 185
++S R L L G S GL L+LG+ PF V P LR LP++ ++ +T+ M + R G + +D+G G G V+ AA++G+ A G ELNP L S W+ G + R ++W+ D +++FGV +MT L E+L+ E + +A VV RF
Sbjct: 8 TRSGRKRHWGLALLGVVSGAGLALSLGAAPF-VAPALRRVCLPFVPASPAQVETVL------QMLKGRRG----KLVDIGSGDGRIVIAAAKQGFRAVGYELNPWLVWYSRYKAWQEG----VHHNTRFYISDLWKVDFS--EYSNVVIFGVPQMMTSLEEKLQRELRSNARVVACRF 168
BLAST of EWM29827.1 vs. NCBI_GenBank
Match: gi|701416642|ref|XP_009999669.1| (PREDICTED: protein FAM173B, partial [Chaetura pelagica]) HSP 1 Score: 77.411 bits (189), Expect = 5.228e-14 Identity = 55/192 (28.65%), Postives = 88/192 (45.83%), Query Frame = 0
Query: 31 LTLGSLPFLVIPMLRGNALPYMNIPMSKYKTIFDEVLPRHMPRRRAGSPPLRFIDLGHGMGEAVVNAAQRGYIATGVELNPTLYLLSICNVWRHGLLWPLEPRVRLVYGNMWRKDMELGRQDVILMFGVQSLMTRLAERLRSEAQHDALVVLYRFKLDLRSRASPTGAALREITGRDGSDEQA-EIKILEVT 221
L G+ PFL P LR LP++ ++ + + M R+GS +D+G G G V+ AA+RG+ A G ELNP L S WR G + + ++W+ + +++FGV +M +L ++L E + +A ++ RF TG + + D + E KILEVT
Sbjct: 6 LYAGAAPFLA-PALRKVCLPFVPATATQVRNVL------RMLENRSGS----LVDIGSGDGRIVIAAAKRGFKAVGYELNPWLVWYSRYRAWRDG----VHQNTKFCISDLWK--VSFSHYTNVVVFGVPQMMPQLGKKLEEELECNARIIACRFPFPCWIPDHTTGEGIDTVWAYDLKHSRGHETKILEVT 180
BLAST of EWM29827.1 vs. NCBI_GenBank
Match: gi|675887006|ref|XP_009029005.1| (hypothetical protein HELRODRAFT_135380, partial [Helobdella robusta] >gi|555689467|gb|ESN92699.1| hypothetical protein HELRODRAFT_135380, partial [Helobdella robusta]) HSP 1 Score: 77.0258 bits (188), Expect = 6.108e-14 Identity = 52/157 (33.12%), Postives = 77/157 (49.04%), Query Frame = 0
Query: 29 GLLTLGSLPFLVIPMLRGNALPYMNIPMSKYKTIFDEVLPRHMPRRRAGSPPLRFIDLGHGMGEAVVNAAQRGYIATGVELNPTLYLLSICNVWRHGLLWPLEPRVRLVYGNMWRKDMELGRQDVILMFGVQSLMTRLAERLRSEAQHDALVVLYRF 185
GLL + PFL +P R LPY+ + K IF + R IDLG G G V+ AA++G++A GVELNP L S + G + N++++ L + D I++FGV SLM L +L++E D+L++ RF
Sbjct: 13 GLLCAATTPFL-LPAFRRICLPYVPATEVQMKNIFQALSGRKG----------NLIDLGSGDGRIVIEAARQGFVAVGVELNPWLVAYSKFRSYLAG----TSKNTKFKTSNLFKE--SLSKYDNIVIFGVDSLMEPLGNKLKAEVTEDSLIIACRF 152
BLAST of EWM29827.1 vs. NCBI_GenBank
Match: gi|817215775|ref|XP_012283997.1| (PREDICTED: protein FAM173B isoform X2 [Orussus abietinus] >gi|817215778|ref|XP_012283998.1| PREDICTED: protein FAM173B isoform X2 [Orussus abietinus]) HSP 1 Score: 74.7146 bits (182), Expect = 7.699e-13 Identity = 56/184 (30.43%), Postives = 90/184 (48.91%), Query Frame = 0
Query: 8 QSKSPRPTEPPLLLYGAASVVG----LLTLGSLPFLVIPMLRGNALPYMNIPMSKYKTIFDEVLPRHMPRRRAGSPPLRFIDLGHGMGEAVVNAAQRGYIATGVELNPTLYLLSICNVWRHGLLWPLEPRVRLVYGNMWRKDMELGRQDVILMFGVQSLMTRLAERLRSEAQHDALVVLYRFKL 187
+++ +P P+ Y +V G L + PF V P LR LPY+ + + + + R R+G+ ID+G G G V+ AA++G+ A GVELNP L S G L + ++W+ L + D I++FGV+ +MT + E+ SE + D++VV+ RF L
Sbjct: 11 KTERGKPKISPVAGYVLITVTGGIGTALLIACAPF-VSPALRKICLPYVPATTVQVENVLSAL------RGRSGN----LIDVGSGDGRIVLAAARKGFKADGVELNPWLIAYSKIKAATQG----LASKTAFFRRDLWK--FNLTKYDNIVIFGVEQMMTEIEEKFISELRKDSVVVVCRFPL 177
BLAST of EWM29827.1 vs. NCBI_GenBank
Match: gi|397598837|gb|EJK57294.1| (hypothetical protein THAOC_22679 [Thalassiosira oceanica]) HSP 1 Score: 77.411 bits (189), Expect = 8.160e-13 Identity = 54/173 (31.21%), Postives = 86/173 (49.71%), Query Frame = 0
Query: 19 LLLYGAASVV--GLLTLGSLPFLVIPMLRGNALPYMNIPMSKYKTIFDEVLPRHMPRRRAGSPPLRFIDLGHGMGEAVVNAAQRGYI--ATGVELNPTLYLLSICNVWRHGLLWPLEPRVRLVYGNMWRKDMELGRQDVILMFGVQSLMTRLAERLRSEAQHDALVVLYRFKL 187
LLL G A+++ L L SLP P+L PY+ +K +F + +R + PL+F+DLG G G V AA+ G + G E+NPTL++ + W P + G++WR D L R DV+ ++G+ +M RL +L+ E + ++VV F +
Sbjct: 291 LLLIGGAAILLPHLAVLLSLP----PVLMKRGAPYLPTFGNKMDVMFGIIRAHIKQQRSKNTKPLKFVDLGSGDGRVVFRAAREGLFKESVGYEINPTLHIFACLRKMITPKYW---PNTKFRMGDLWRTD--LSRFDVVAVYGLSPIMDRLGSKLKDELRPGSIVVSNVFSI 454
BLAST of EWM29827.1 vs. NCBI_GenBank
Match: gi|817215773|ref|XP_012283996.1| (PREDICTED: protein FAM173B isoform X1 [Orussus abietinus]) HSP 1 Score: 74.3294 bits (181), Expect = 9.298e-13 Identity = 56/184 (30.43%), Postives = 90/184 (48.91%), Query Frame = 0
Query: 8 QSKSPRPTEPPLLLYGAASVVG----LLTLGSLPFLVIPMLRGNALPYMNIPMSKYKTIFDEVLPRHMPRRRAGSPPLRFIDLGHGMGEAVVNAAQRGYIATGVELNPTLYLLSICNVWRHGLLWPLEPRVRLVYGNMWRKDMELGRQDVILMFGVQSLMTRLAERLRSEAQHDALVVLYRFKL 187
+++ +P P+ Y +V G L + PF V P LR LPY+ + + + + R R+G+ ID+G G G V+ AA++G+ A GVELNP L S G L + ++W+ L + D I++FGV+ +MT + E+ SE + D++VV+ RF L
Sbjct: 14 KTERGKPKISPVAGYVLITVTGGIGTALLIACAPF-VSPALRKICLPYVPATTVQVENVLSAL------RGRSGN----LIDVGSGDGRIVLAAARKGFKADGVELNPWLIAYSKIKAATQG----LASKTAFFRRDLWK--FNLTKYDNIVIFGVEQMMTEIEEKFISELRKDSVVVVCRFPL 180
BLAST of EWM29827.1 vs. NCBI_GenBank
Match: gi|694857386|ref|XP_009470330.1| (PREDICTED: protein FAM173B [Nipponia nippon]) HSP 1 Score: 74.7146 bits (182), Expect = 9.553e-13 Identity = 55/204 (26.96%), Postives = 91/204 (44.61%), Query Frame = 0
Query: 19 LLLYGAASVVGLLTLGSLPFLVIPMLRGNALPYMNIPMSKYKTIFDEVLPRHMPRRRAGSPPLRFIDLGHGMGEAVVNAAQRGYIATGVELNPTLYLLSICNVWRHGLLWPLEPRVRLVYGNMWRKDMELGRQDVILMFGVQSLMTRLAERLRSEAQHDALVVLYRFKLDLRSRASPTGAALREITGRD-GSDEQAEIKILEVT 221
L+ G + L + PF V P LR LP++ ++ + + M R+GS +D+G G G V+ AA+RG+ A G ELNP L S WR G + + ++W+ + R +++FGV +M +L ++L+ E + +A ++ RF TG + + D E K LE+T
Sbjct: 30 LVTAGVGGTLVALYAAATPF-VTPALRKVCLPFVPATATQIQNVL------KMLENRSGS----LVDIGSGDGRIVIAAAKRGFKAVGYELNPWLVWYSRYRAWRDG----VHQNTKFYISDLWK--VSFSRYTNVVVFGVPQMMPQLEKKLQEELECNARIIACRFPFPCWIPDYTTGEGIDTVWAYDLKHSRGCETKSLEIT 216
BLAST of EWM29827.1 vs. NCBI_GenBank
Match: gi|348561930|ref|XP_003466764.1| (PREDICTED: protein FAM173B [Cavia porcellus]) HSP 1 Score: 74.3294 bits (181), Expect = 1.352e-12 Identity = 61/205 (29.76%), Postives = 95/205 (46.34%), Query Frame = 0
Query: 7 SQSKSPRPTEPPLLLYGAA--SVVGLLTLGSLPFLVIPMLRGNALPYMNIPMSKYKTIFDEVLPRHMPRRRAGSPPLRFIDLGHGMGEAVVNAAQRGYIATGVELNPTLYLLSICNVWRHGLLWPLEPRVRLVYGNMWRKDMELGRQDVILMFGVQSLMTRLAERLRSEAQHDALVVLYRFKLDLRSRASPTGAALREITGRDGS 209
S++ + T LLL G A ++V L + + PFL P LR LP++ + + + M RRR GS +D+G G G V+ AA+ G+ A G ELNP L S WR G + ++W+ + + +++FGV +M +L ++L E Q DA V+ RF + A TG + + D S
Sbjct: 26 SEAGGSQRTSWGLLLTGVAGGALVALYAVAT-PFLT-PALRKVCLPFVPATAKQIENVV------KMLRRRRGS----LVDVGSGDGRVVIAAAKEGFTAVGYELNPWLVWYSRYRAWREG----VRGSTSFYISDLWK--VSFSQYSNVVVFGVPQMMPQLEKKLELELQDDARVIACRFPFPHWTPAHVTGHGVDTVWAYDVS 212 The following BLAST results are available for this feature:
BLAST of EWM29827.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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