EWM21928.1, cds8745 (CDS) Nannochloropsis gaditana

Overview
NameEWM21928.1
Unique Namecds8745
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:135427..137967 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21928.1
Productcre-cul-1 protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100220g1.7203.mrna
GbkeyCDS
End range.
End range137967
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:135427..137967 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0007049cell cycle
GO:0009056catabolic process
GO:0007275multicellular organism development
GO:0008219cell death
GO:0019538protein metabolic process
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0031461cullin-RING ubiquitin ligase complex
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0031625ubiquitin protein ligase binding
Vocabulary: INTERPRO
TermDefinition
IPR016159Cullin_repeat-like_dom
IPR011991WHTH_DNA-bd_dom
IPR001373Cullin_N
IPR019559Cullin_neddylation_domain
IPR016158Cullin_homology
Homology
[Close]
BLAST of EWM21928.1 vs. NCBI_GenBank
Match: gi|585102275|gb|EWM21928.1| (cre-cul-1 protein, partial [Nannochloropsis gaditana])

HSP 1 Score: 1744.94 bits (4518), Expect = 0.000e+0
Identity = 846/846 (100.00%), Postives = 846/846 (100.00%), Query Frame = 0 
Query:    1 EHLAVLRRVIGSFVALGTTLEPSHPVGFYKEQLEDHVLREVYLHYVYKAGLFAAEVSAGHADEAAVAKYIRTVEGCVAAEKAIWEPVYPSTSRGAVRVVRKSMLESQPHHQILMAFANAALAFHAERLADLELLYRLLDNEDVEPTKGIEALRNIFFGFVKEVGAREVKRANEEARHRQSSPLRPDMSHMLARSSLPPDYVCSDTIQTMLDLYSHYLTLVRVTFKDDSRFAKAFKTACEHFINALPNMSESLAIHAHYFLDKNCPESRMENVDVALDSIVLLFNFIQDKDLFHRSYARLLAARIISFSSVSDEAERRMMKHLMQVCGFQYAMTFQRMFMDKTLSFELSCEFAEWEREHRAQQQRLLLMRQKQLAEGRGVCLEGGDEVGGADGVTGLEEGGRGGAGGAGGAIGEVGRGGHGRRKSDSAIEFVETESGHVTPRSVSPKLSHGMRFIGLHDSSPLQVLLSKRVFADKVKKYKERGLVSTPASSALAPKGDLPHPSSASPQAAAQGGGGTIGTYSVMSGRTPSYHRGNTFFFGDDDMNSPGTAGAGGGGGGSGGAGFSWSHSVLDAPNAKKGIRQTSGAGGEAEVEFFVFILTGGSWPYPSTGQLVQLPAPLMRCVESFSTFYDAKYKRRRLTWLHELGHGEVLFRCPASDRSYTLLVSTSQICILLLFNSRSAWSVEELQRALDLDLGELVLCLYPLLRSQVLTCRPEVAVASKLTKHHTVVVNEGLSRRGCRLAVPRKCDEAELPSALDSPRSMDPARISPTLLNERKSAIEARVVHLMKKAGSMRHDKLIEAVLQHTRQMNFLPPVDFICEVIRADIDKDFLELAEDGPNPLYRYLA 846
            EHLAVLRRVIGSFVALGTTLEPSHPVGFYKEQLEDHVLREVYLHYVYKAGLFAAEVSAGHADEAAVAKYIRTVEGCVAAEKAIWEPVYPSTSRGAVRVVRKSMLESQPHHQILMAFANAALAFHAERLADLELLYRLLDNEDVEPTKGIEALRNIFFGFVKEVGAREVKRANEEARHRQSSPLRPDMSHMLARSSLPPDYVCSDTIQTMLDLYSHYLTLVRVTFKDDSRFAKAFKTACEHFINALPNMSESLAIHAHYFLDKNCPESRMENVDVALDSIVLLFNFIQDKDLFHRSYARLLAARIISFSSVSDEAERRMMKHLMQVCGFQYAMTFQRMFMDKTLSFELSCEFAEWEREHRAQQQRLLLMRQKQLAEGRGVCLEGGDEVGGADGVTGLEEGGRGGAGGAGGAIGEVGRGGHGRRKSDSAIEFVETESGHVTPRSVSPKLSHGMRFIGLHDSSPLQVLLSKRVFADKVKKYKERGLVSTPASSALAPKGDLPHPSSASPQAAAQGGGGTIGTYSVMSGRTPSYHRGNTFFFGDDDMNSPGTAGAGGGGGGSGGAGFSWSHSVLDAPNAKKGIRQTSGAGGEAEVEFFVFILTGGSWPYPSTGQLVQLPAPLMRCVESFSTFYDAKYKRRRLTWLHELGHGEVLFRCPASDRSYTLLVSTSQICILLLFNSRSAWSVEELQRALDLDLGELVLCLYPLLRSQVLTCRPEVAVASKLTKHHTVVVNEGLSRRGCRLAVPRKCDEAELPSALDSPRSMDPARISPTLLNERKSAIEARVVHLMKKAGSMRHDKLIEAVLQHTRQMNFLPPVDFICEVIRADIDKDFLELAEDGPNPLYRYLA
Sbjct:    1 EHLAVLRRVIGSFVALGTTLEPSHPVGFYKEQLEDHVLREVYLHYVYKAGLFAAEVSAGHADEAAVAKYIRTVEGCVAAEKAIWEPVYPSTSRGAVRVVRKSMLESQPHHQILMAFANAALAFHAERLADLELLYRLLDNEDVEPTKGIEALRNIFFGFVKEVGAREVKRANEEARHRQSSPLRPDMSHMLARSSLPPDYVCSDTIQTMLDLYSHYLTLVRVTFKDDSRFAKAFKTACEHFINALPNMSESLAIHAHYFLDKNCPESRMENVDVALDSIVLLFNFIQDKDLFHRSYARLLAARIISFSSVSDEAERRMMKHLMQVCGFQYAMTFQRMFMDKTLSFELSCEFAEWEREHRAQQQRLLLMRQKQLAEGRGVCLEGGDEVGGADGVTGLEEGGRGGAGGAGGAIGEVGRGGHGRRKSDSAIEFVETESGHVTPRSVSPKLSHGMRFIGLHDSSPLQVLLSKRVFADKVKKYKERGLVSTPASSALAPKGDLPHPSSASPQAAAQGGGGTIGTYSVMSGRTPSYHRGNTFFFGDDDMNSPGTAGAGGGGGGSGGAGFSWSHSVLDAPNAKKGIRQTSGAGGEAEVEFFVFILTGGSWPYPSTGQLVQLPAPLMRCVESFSTFYDAKYKRRRLTWLHELGHGEVLFRCPASDRSYTLLVSTSQICILLLFNSRSAWSVEELQRALDLDLGELVLCLYPLLRSQVLTCRPEVAVASKLTKHHTVVVNEGLSRRGCRLAVPRKCDEAELPSALDSPRSMDPARISPTLLNERKSAIEARVVHLMKKAGSMRHDKLIEAVLQHTRQMNFLPPVDFICEVIRADIDKDFLELAEDGPNPLYRYLA 846
[Close]
BLAST of EWM21928.1 vs. NCBI_GenBank
Match: gi|298710078|emb|CBJ31794.1| (similar to Cullin-1 (CUL-1) isoform 1 [Ectocarpus siliculosus])

HSP 1 Score: 145.591 bits (366), Expect = 3.229e-32
Identity = 107/367 (29.16%), Postives = 178/367 (48.50%), Query Frame = 0 
Query:    6 LRRVIGSFVALGTTLEPSHPVGFYKEQLEDHVLREVYLHYVYKAGLFAAEVSAGHADEAAVAKYIRTVEGCVAAEKAIWEPVYPSTSRGAVRVVRKSMLESQPHHQILMAFANAALAFHAERLADLELLYRLLDNEDVEPTKG---------IEALRNIFFGFVKEVGAREVKRANEEARHRQSSPLRPDMSHMLARSSLPPD------YVCSDTIQTMLDLYSHYLTLVRVTFKDDSRFAKAFKTACEHFINALPNMSESLAIHAHYFLDKNCPESRME--NVDVALDSIVLLFNFIQDKDLFHRSYARLLAARIISFSSVSDEAERRMMKHLMQVCGFQYAMTFQRMFMDKTLSFELSCEFAEWE 355
            +R ++ ++  LG   E       ++ +LED ++ +   +Y  +       +S        V +Y++ VE  +  E +  E    S S   + V  +  L  + H   L+  A   L+   E+  DL  L+ L+   +   T+G         ++AL  +    V+ VG   VK    + + + +  +  D + +     LP            D +  ML++Y HY  L+  +F     F      AC+ F+NA+P  SE LA +AH  LDK   ES+++      +LD +  LF +I DKD+FH+ Y++LL+ RII  +SVSDEAE RM+K++ ++ GF+Y    QRMF+DKTLS +L   + EW+
Sbjct:  186 VRSLLKTYETLG--FEKRDRSHLFQTELEDFLVTDTGRYYSRRGSDLLQHMS--------VPRYLQEVERYLQEEASRCESFVGSYSARRILVAAQEAL-IKAHSSRLVEEARGMLSASPEKRVDLRRLFTLISYLEDGETRGGGGAVENNAMKALEEVVRDHVRSVGLTVVK----DLQAKGAMDVSDDEAGVRDNDLLPAGGGKAAVVTSDDVVAAMLEVYEHYKGLMADSFDSSPGFRAVLDEACKSFVNAVPQASEWLARYAHCLLDKGFKESKVDEGTRQESLDHVGFLFAYIADKDIFHKYYSKLLSKRIIQLTSVSDEAEERMLKNMRKISGFEYTSKLQRMFVDKTLSRDLHTGYVEWQ 537

HSP 2 Score: 101.293 bits (251), Expect = 2.951e-18
Identity = 77/265 (29.06%), Postives = 126/265 (47.55%), Query Frame = 0 
Query:  592 EFFVFILTGGSWPYPSTGQLVQLPAPLMRCVESFSTFYDAKYKRRRLTWLHELGHGEVLFRCPASDRSYTLLVSTSQICILLLFNSRSAWSVEELQRALDLDLGELVLCLYPLLRSQVLTCRPEVAVASKLTKHHTV------VVNEGLSRRGCRLAVPRKCDEAELPSALDSPRSMDPARISPTLLNERKSAIEARVVHLMKKAGSMRHDKLIEAVLQHTRQM-NFLPPVDFICEVIRADIDKDFLELAEDGPNP---LYRYLA 846
            E F F+LT G WP  S     + PAP+   V SF  FY   +  R+L WL+ LGHGE++  C   D++Y +  ST Q+ +L  FN  +  +V EL R +++   E+V  L+PL+++ +L          K T    +       +N   S +  R+ +    D +  P        +  A+ S  ++ +RK +++A +  +MK      H  L+  V +  R + +  PP  F+   I   I+KD+L   E G  P    Y+Y+A
Sbjct:  586 EAFTFVLTAGCWPLQSVSSSFKPPAPIEDYVVSFLDFYSEVHSGRKLEWLYHLGHGEMVTHC--FDKTYRIYSSTFQMGLLHQFNDSTEIAVSELARGINVSDTEIVRHLFPLIKAGLLRLHGADGADLKPTSCDDIPPGARARLNASFSHKRTRVKI-NIVDHSRQP--------LKEAKPSTEIIQDRKMSVQAAISRVMKIRKEASHRDLVVQVREQLRHLFDVDPP--FVKRNIEDLINKDYLHRLE-GREPGKEGYKYVA 836
[Close]
BLAST of EWM21928.1 vs. NCBI_GenBank
Match: gi|748481042|ref|XP_011106675.1| (hypothetical protein H072_683 [Dactylellina haptotyla CBS 200.50] >gi|526205161|gb|EPS45320.1| hypothetical protein H072_683 [Dactylellina haptotyla CBS 200.50])

HSP 1 Score: 133.65 bits (335), Expect = 1.639e-28
Identity = 97/362 (26.80%), Postives = 176/362 (48.62%), Query Frame = 0 
Query:    4 AVLRRVIGSFVALGTTLEPSHP--VGFYKEQLEDHVLREVYLHYVYKAGLFAAEVSAGHADEAAVAKYIRTVEGCVAAEKA-IWEPVYPSTSRGAVRVVRKSMLESQPHHQILMAFANAALAFHAERLADLELLYRLLDNEDVEPTKGIEALRNIFFGFVKEVGAREVKR-ANEEARHRQSSPLRPDMSHMLARSSLPPDYVCSDTIQTMLDLYSHYLTLVRVTFKDDSRFAKAFKTACEHFIN-------ALPNMSESLAIHAHYFLDKNCPESRMENVDVALDSIVLLFNFIQDKDLFHRSYARLLAARIISFSSVSDEAERRMMKHLMQVCGFQYAMTFQRMFMDKTLSFELSCEFAEW 354
            A+++ ++ SFV+LG     S    +  Y+E  E   L +   +Y  ++  F AE S        V +Y++  E  ++ E+  +   ++P      ++  ++ +++    H+ L+      L  + +R  DL+ +Y LL       T G+E LR  F   V++ G   +++ ANE A       L P +                  +  +L+++  Y +LV++ FK+D+ F ++   AC  F+N       A     E LA +A   L K+   +   +++  LDSI+ +F +++DKD+F + Y+R+LA R++  +S SD+AE  M+  L   CGF+Y    QRMF D  +S +L+  + EW
Sbjct:  192 AMVKSIVDSFVSLGLDENDSSKSTLEVYREYFEKPFLDKTNNYYQLESKQFVAENS--------VVEYMKKAETRLSEEEGRVHVYLHPDIMVPLMKTCQRVLIQE---HKTLLHDEFQVL-LNNDRQDDLKRMYNLLS----RITDGLEPLRTKFEAHVRKAGLEAIEKVANENA----DDNLEPKVY-----------------VDALLEVHEKYSSLVKIAFKEDTEFVRSLDNACREFVNRNKVCKAASSKSPELLAKYADSLLKKSAKAAEEADLESKLDSIMTVFKYVEDKDVFQKFYSRMLAKRLVHATSASDDAETSMIGKLKDACGFEYTNKLQRMFQDMQISKDLNDSYKEW 516

HSP 2 Score: 78.1814 bits (191), Expect = 4.151e-11
Identity = 62/269 (23.05%), Postives = 115/269 (42.75%), Query Frame = 0 
Query:  565 WSHSVLDAPNAKKGIRQTSGAGGEAEVEFFVFILTGGSWPYPSTGQLVQLPAPLMRCVESFSTFYDAKYKRRRLTWLHELGHGEVLFRCPASDR-SYTLLVSTSQICILLLFNSRSAWSVEELQRALDLDLGELVLCLYPLLRSQVLTCRPEVAVASKLTKHHTVVVNEGLSRRGCRLAVPRKCDEAELPSALDSPRSMDPARISPTLLNERKSAIEARVVHLMKKAGSMRHDKLIEAVLQHTRQMNFLPPVDFICEVIRADIDKDFLE 832
            W ++ LD  + K              V+F + +L    WP         +P  + +  + F TFY  K+  R+L WL  L  G+V      S +  +T  VST Q+ ILL+FN  +++  + ++    L    L   L   ++++VL   P     SK+    T+ +N     +  R+          L  A+ + +  +      T+  +RK  +++ +V +MK    ++H  L+   +   +   F P V  I + I   ++K++LE
Sbjct:  516 WMNNTLDEESLKTA------------VDFSIQVLGTSFWPLTPPNTPFNIPQVITKTYDRFQTFYFQKHSGRKLNWLWHLCKGDVKATFAKSSKVPFTFHVSTYQMAILLMFNDATSYPYDNIEATTGLSKDYLDPSLGVFIKAKVLNIEP---AGSKVGPGTTLTLNTDFKSKKIRV---------NLNMAVRAEQKQETEDTHKTIEEDRKLLMQSAIVRIMKSRKVLKHAVLVSETIAQIK-TRFTPKVPDIKKCIDILLEKEYLE 759
[Close]
BLAST of EWM21928.1 vs. NCBI_GenBank
Match: gi|748516770|ref|XP_011124812.1| (hypothetical protein AOL_s00109g29 [Arthrobotrys oligospora ATCC 24927] >gi|345563457|gb|EGX46457.1| hypothetical protein AOL_s00109g29 [Arthrobotrys oligospora ATCC 24927])

HSP 1 Score: 133.65 bits (335), Expect = 1.683e-28
Identity = 97/362 (26.80%), Postives = 177/362 (48.90%), Query Frame = 0 
Query:    4 AVLRRVIGSFVALGTTLEPSHP--VGFYKEQLEDHVLREVYLHYVYKAGLFAAEVSAGHADEAAVAKYIRTVEGCVAAEKA-IWEPVYPSTSRGAVRVVRKSMLESQPHHQILMAFANAALAFHAERLADLELLYRLLDNEDVEPTKGIEALRNIFFGFVKEVGAREVKR-ANEEARHRQSSPLRPDMSHMLARSSLPPDYVCSDTIQTMLDLYSHYLTLVRVTFKDDSRFAKAFKTACEHFIN-------ALPNMSESLAIHAHYFLDKNCPESRMENVDVALDSIVLLFNFIQDKDLFHRSYARLLAARIISFSSVSDEAERRMMKHLMQVCGFQYAMTFQRMFMDKTLSFELSCEFAEW 354
            A+++ ++ SFV+LG     S    +  Y+E  E   L    ++Y  ++  F AE S        V +Y++  E  ++ E+  +   ++P      ++  ++ +++    H+ L+      L  + +R  DL+ +Y LL       T+G+E LR  F   V++ G   +++ ANE A       L P +                  +  +L+++  Y +LV++ FK+D+ F ++   AC  F+N       A     E LA +A   L K+   +   +++  LDSI+ +F +++DKD+F + Y+R+LA R++  +S SD+AE  M+  L   CGF+Y    QRMF D  +S +L+  + EW
Sbjct:  192 AMVKSIVDSFVSLGLDENDSSKSTLDVYREFFEKPFLEITNVYYQLESKQFVAENS--------VVEYMKKAETRLSEEEGRVHVYLHPDIMIPLMKTCQRVLIQE---HKTLLHDEFQVL-LNNDRQDDLKRMYNLLS----RITEGLEPLRTKFEAHVRKAGLEAIEKVANENA----DDNLEPKVY-----------------VDALLEVHEKYSSLVKIAFKEDTEFVRSLDNACREFVNRNKVCKAASSKSPELLAKYADSLLKKSAKAAEEADLESKLDSIMTVFKYVEDKDVFQKFYSRMLAKRLVHATSASDDAETSMIGKLKDACGFEYTNKLQRMFQDMQISKDLNDSYKEW 516

HSP 2 Score: 82.4185 bits (202), Expect = 2.182e-12
Identity = 63/269 (23.42%), Postives = 118/269 (43.87%), Query Frame = 0 
Query:  565 WSHSVLDAPNAKKGIRQTSGAGGEAEVEFFVFILTGGSWPYPSTGQLVQLPAPLMRCVESFSTFYDAKYKRRRLTWLHELGHGEVLFRCPASDR-SYTLLVSTSQICILLLFNSRSAWSVEELQRALDLDLGELVLCLYPLLRSQVLTCRPEVAVASKLTKHHTVVVNEGLSRRGCRLAVPRKCDEAELPSALDSPRSMDPARISPTLLNERKSAIEARVVHLMKKAGSMRHDKLIEAVLQHTRQMNFLPPVDFICEVIRADIDKDFLE 832
            W ++ LD  + K              V+F + +L    WP         +P  + +  + F TFY  K+  R+L WL  L  G+V      S +  +T  VST Q+ ILL+FN  ++++ E+++    L    L   L   ++++VL   P    +SK+    T+ +N     +  R+          L  A+ + +  +      T+  +RK  +++ +V +MK    ++H  L+   +   +   F P V  I + I   ++K++LE
Sbjct:  516 WMNNTLDEESLKTA------------VDFSIQVLGTSFWPLTPPNTPFNIPQVITKTYDRFQTFYFQKHSGRKLNWLWHLCKGDVKATFAKSSKVPFTFHVSTYQMAILLMFNDATSYTYEDIESTTSLSRDYLDPSLGVFIKAKVLNIEP---ASSKVGPGTTLTLNTDFKSKKIRV---------NLNMAVRAEQKQETEDTHKTIEEDRKLLMQSAIVRIMKSRKKLKHAVLVLETIAQIKS-RFTPKVPDIKKCIDILLEKEYLE 759
[Close]
BLAST of EWM21928.1 vs. NCBI_GenBank
Match: gi|582955219|gb|EWC43472.1| (hypothetical protein DRE_07551 [Drechslerella stenobrocha 248])

HSP 1 Score: 132.494 bits (332), Expect = 4.268e-28
Identity = 95/361 (26.32%), Postives = 172/361 (47.65%), Query Frame = 0 
Query:    4 AVLRRVIGSFVALGTTLEPSHP--VGFYKEQLEDHVLREVYLHYVYKAGLFAAEVSAGHADEAAVAKYIRTVEGCVAAEKA-IWEPVYPSTSRGAVRVVRKSMLESQPHHQILMAFANAALAFHAERLADLELLYRLLDNEDVEPTKGIEALRNIFFGFVKEVGAREVKRANEEARHRQSSPLRPDMSHMLARSSLPPDYVCSDTIQTMLDLYSHYLTLVRVTFKDDSRFAKAFKTACEHFIN-------ALPNMSESLAIHAHYFLDKNCPESRMENVDVALDSIVLLFNFIQDKDLFHRSYARLLAARIISFSSVSDEAERRMMKHLMQVCGFQYAMTFQRMFMDKTLSFELSCEFAEW 354
            A+++ ++ SFV+LG     S    +  Y+E  E   L     +Y +++  F AE S        V +Y++  E  ++ E+  +   ++P      ++  ++ ++  Q H  +L       L  + +R  DL+ +Y LL       T G+E LR  F   V++ G   +++    A       L P +                  +  +L+++  Y +LV++ FK+D+ F ++   AC  F+N       A     E LA +A   L K+   +   +++  LDSI+ +F +++DKD+F + Y+R+LA R++  +S SD+AE  M+  L   CGF+Y    QRMF D  +S +L+  + EW
Sbjct:  192 AMVKSIVDSFVSLGLDENDSSKSTLEVYREYFEKPFLESTNNYYQFESKQFVAENS--------VVEYMKKAETRLSEEEGRVHVYLHPDIMVPLMKTCQRVLI--QEHAPLLRDEFQVLL--NNDRQDDLKRMYNLLS----RITDGLEPLRTKFEAHVRKAGLEAIEKV---ANENTDDNLEPKVY-----------------VDALLEVHEKYSSLVKIAFKEDTEFVRSLDNACREFVNRNKVCKSASSKSPELLAKYADSLLKKSAKAAEEADLESKLDSIMTVFKYVEDKDVFQKFYSRMLAKRLVHATSASDDAETSMIGKLKDACGFEYTNKLQRMFQDMQISKDLNDSYKEW 516

HSP 2 Score: 82.4185 bits (202), Expect = 2.020e-12
Identity = 60/243 (24.69%), Postives = 111/243 (45.68%), Query Frame = 0 
Query:  591 VEFFVFILTGGSWPYPSTGQLVQLPAPLMRCVESFSTFYDAKYKRRRLTWLHELGHGEVLFRCPASDR-SYTLLVSTSQICILLLFNSRSAWSVEELQRALDLDLGELVLCLYPLLRSQVLTCRPEVAVASKLTKHHTVVVNEGLSRRGCRLAVPRKCDEAELPSALDSPRSMDPARISPTLLNERKSAIEARVVHLMKKAGSMRHDKLIEAVLQHTRQMNFLPPVDFICEVIRADIDKDFLE 832
            V+F + +L    WP         +P  + +  + F TFY  K+  R+L WL  L  G+V      S +  +T  VST Q+ ILL+FN  +++S EE++    L    L   L   ++++VL   P    + K+    T+ +N     +  R+          L  A+ + +  +      T+  +RK  +++ +V +MK    ++H  L++  +   +   F P V  I + I   ++K++LE
Sbjct:  530 VDFSIQVLGTSFWPLTPPNTPFHIPQVITKTYDRFQTFYFQKHSGRKLNWLWHLCKGDVKATFAKSSKVPFTFHVSTYQMAILLMFNDATSYSYEEIETTTGLSRDYLDPSLGVFIKAKVLNLEP---ASGKVGPGTTLTLNTDFKSKKIRV---------NLNMAVRTEQKQEAEDTHKTIEEDRKLLMQSAIVRIMKSRKVLKHVVLVQETIAQIKS-RFTPKVPDIKKCIDILLEKEYLE 759
[Close]
BLAST of EWM21928.1 vs. NCBI_GenBank
Match: gi|296412591|ref|XP_002836006.1| (hypothetical protein [Tuber melanosporum Mel28] >gi|295629806|emb|CAZ80163.1| unnamed protein product [Tuber melanosporum])

HSP 1 Score: 124.405 bits (311), Expect = 1.385e-25
Identity = 93/361 (25.76%), Postives = 168/361 (46.54%), Query Frame = 0 
Query:    4 AVLRRVIGSFVALGTTLEPSHP--VGFYKEQLEDHVLREVYLHYVYKAGLFAAEVSAGHADEAAVAKYIRTVEGCVAAEKA-IWEPVYPSTSRGAVRVVRKSMLESQPHHQILMAFANAALAFHAERLADLELLYRLLDNEDVEPTKGIEALRNIFFGFVKEVGAREVKRANEEARHRQSSPLRPDMSHMLARSSLPPDYVCSDTIQTMLDLYSHYLTLVRVTFKDDSRFAKAFKTACEHFIN-------ALPNMSESLAIHAHYFLDKNCPESRMENVDVALDSIVLLFNFIQDKDLFHRSYARLLAARIISFSSVSDEAERRMMKHLMQVCGFQYAMTFQRMFMDKTLSFELSCEFAEW 354
            A+++ ++ SFV+LG     S    +  Y++  E   L     +Y  ++  F AE S        V +Y++  E  +A E+  +   ++P      ++  +K ++  Q H  +L       L    +R +DL+ +Y LL         G+E LR  F   V+  G   V +  +E        L P +                  +  +L++++ Y  LV V FK ++ F ++   AC  F+N       A     E LA +A   L K+   +   +++  L +I+ +F +++DKD+F + Y+++LA R+++F+S SD+AE  M+  L + CGF+Y    QRMF D  +S +L+  +  W
Sbjct:  193 AMVKSIVDSFVSLGLDESDSSKSTLDVYRQFFEKPFLEATTAYYQMESKQFVAENS--------VVEYMKKAETRLAEEEGRVQMYLHPDIYGPLMKTCQKVLI--QEHAPLLREEFQVLL--DNDRQSDLQRMYNLLS----RIPDGLEPLRTKFEAHVRRAGTSAVDKIADEG----GDNLDPKVY-----------------VDALLEVHTQYQNLVNVAFKGEAEFVRSLDNACREFVNRNKVCKSASTKSPELLAKYADSLLRKSAKSAEESDLENKLTAIMTVFKYVEDKDVFQKFYSKMLAKRLVNFTSASDDAETSMIGKLKEACGFEYTNKLQRMFQDMQISKDLNDNYKAW 516

HSP 2 Score: 84.3445 bits (207), Expect = 5.365e-13
Identity = 65/263 (24.71%), Postives = 115/263 (43.73%), Query Frame = 0 
Query:  571 DAPNAKKGIRQTSGAGGEAEVEFFVFILTGGSWPYPSTGQLVQLPAPLMRCVESFSTFYDAKYKRRRLTWLHELGHGEVLFR-CPASDRSYTLLVSTSQICILLLFNSRSAWSVEELQRALDLDLGELVLCLYPLLRSQVLTCRPEVAVASKLTKHHTVVVNEGLSRRGCRLAVPRKCDEAELPSALDSPRSMDPARISPTLLNERKSAIEARVVHLMKKAGSMRHDKLIEAVLQHTRQMNFLPPVDFICEVIRADIDKDFLE 832
            D  +  K   +  G      V+F   +L    WP         +P  +++    F  FY+ K+  R+LTWL  L  GE+    C A+   YT  VST Q+ +LLLFN  +  S EE +++  L    +   L   L+++VLT  P     SK+       +N     +  R+          L  A+ + +  +      T+  +RK  +++ +V +MK    ++H  L++  +   +   F P +  I + I   ++K++LE
Sbjct:  508 DLNDNYKAWLEGKGESASNGVDFSCQVLGTSFWPLNPPTTPFNIPEVIVQTYTRFVEFYNGKHNGRKLTWLWHLCKGELKASYCKATKTPYTFQVSTYQMAMLLLFNDATKISYEEFEKSTGLSKEYMEPALAVFLKAKVLTISPP---GSKIGPGTQYSLNFDFKSKKIRV---------NLNMAVRAEQKQEVEETHKTIEEDRKLLMQSAIVRIMKARKVLKHVVLVQETIGQIKS-RFTPKIPDIKKCIDILLEKEYLE 757
[Close]
BLAST of EWM21928.1 vs. NCBI_GenBank
Match: gi|17552768|ref|NP_499309.1| (Cullin-1 [Caenorhabditis elegans] >gi|2493900|sp|Q17389.1|CUL1_CAEEL RecName: Full=Cullin-1; Short=CUL-1; AltName: Full=Abnormal cell lineage protein 19 >gi|1381134|gb|AAC47120.1| CUL-1 [Caenorhabditis elegans] >gi|15718119|emb|CAA84695.2| Cullin-1 [Caenorhabditis elegans])

HSP 1 Score: 122.094 bits (305), Expect = 8.778e-25
Identity = 77/261 (29.50%), Postives = 133/261 (50.96%), Query Frame = 0 
Query:  587 GEAEVEFFVFILTGGSWP-YPSTGQLVQLPAPLMRCVESFSTFYDAKYKRRRLTWLHELGHGEVLFRCPASDRSYTLLVSTSQICILLLFNSRSAWSVEELQRALDLDLGELVLCLYPLLRSQVLTCRPEVAVASKLTKHHTVVVNEGLSRRGCRLAVPRKCDEAELPSALDSPRSMDPARISPTLLNERKSAIEARVVHLMKKAGSMRHDKLIEAVLQHTRQMNFLPPVDFICEVIRADIDKDFLELAEDGPNPLYRYLA 846
            G+  VEF V +L+ GSWP +P+T   + LP  L + +E F  FY+ K+  RRLTW++    GE+     A  + Y    +T+Q+C +LLFN + +++VE++  A  +D       +  L+++ VL    E+    ++    TV +N+    +  R+      D ++     D+ R  D   +   +  +RKS I A +V +MK    ++H +L+  V+       F P V+ I   I + I+K+++ L  +G   LY YLA
Sbjct:  534 GQKSVEFNVLVLSSGSWPTFPTTP--ITLPQQLSKTIEIFGQFYNEKFNGRRLTWVYSQSRGEIT--STAFPKKYVFTATTAQMCTMLLFNEQDSYTVEQIAAATKMDEKSAPAIVGSLIKNLVLKADTELQKEDEVPMTATVSLNKAYMNKKVRV------DLSKFTMKQDAVR--DTENVQKNVEEDRKSVISACIVRIMKTRKRVQHQQLMTEVITQLSG-RFKPKVEMIKRCIGSLIEKEYM-LRTEGQKDLYEYLA 780

HSP 2 Score: 79.337 bits (194), Expect = 1.575e-11
Identity = 47/163 (28.83%), Postives = 84/163 (51.53%), Query Frame = 0 
Query:  206 IQTMLDLYSHYLTLVRVTFKDDSRFAKAFKTACEHFIN------------ALPNMSESLAIHAHYFLDKNCP---ESRMENVDVALDSIVLLFNFIQDKDLFHRSYARLLAARIISFSSVSDEAERRMMKHLMQVCGFQYAMTFQRMFMDKTLSFELSCEFAE 353
            ++T+L+++  Y +LV  +FK++  F ++   A   FIN             L   +E LA +    L K+     E+ +E +      I+++F +I DKD+F + Y ++ + R+IS  S SDEAE   +  L  +CG++Y     +M  D  +S +L+ +F E
Sbjct:  368 VKTLLEVHERYQSLVNRSFKNEPGFMQSLDKAATSFINNNAVTKRAPPQAQLTKSAELLARYCDQLLRKSSKMPDEAELEELQT---KIMVVFKYIDDKDVFSKFYTKMFSKRLISELSASDEAEANFITKLKSMCGYEYTARLSKMVNDTQVSKDLTADFKE 527
[Close]
BLAST of EWM21928.1 vs. NCBI_GenBank
Match: gi|268533888|ref|XP_002632074.1| (Hypothetical protein CBG17038 [Caenorhabditis briggsae])

HSP 1 Score: 121.709 bits (304), Expect = 9.664e-25
Identity = 78/269 (29.00%), Postives = 141/269 (52.42%), Query Frame = 0 
Query:  580 RQTSGAGGEAEVEFFVFILTGGSWPYPSTGQLVQLPAPLMRCVESFSTFYDAKYKRRRLTWLHELGHGEVLFRCPASDRSYTLLVSTSQICILLLFNSRSAWSVEELQRALDLDLGELVLCLYPLLRSQVLTCR--PEVAVASKLTKHHTVVVNEGLSRRGCRLAVPRKCDEAELPSALDSPRSMDPARISPTLLNERKSAIEARVVHLMKKAGSMRHDKLIEAVLQHTRQMNFLPPVDFICEVIRADIDKDFLELAEDGPNPLYRYLA 846
            +Q   +  +  +EF + +L+ G+WP      L  LP  L   VE F+ FY+ K+  R+L+W++    GE+        + Y    +T+Q+C LLLFN +  +S E++Q A  LD     + L  L+++QVL  +   +V  A K++ +  +V+N G S +  R+      D +++  A+ + +  D   +  ++  +RK+ I+A +V +MK      H KL+  +++      F P V+ I + I + I+K++L+  ED  + LY YLA
Sbjct:  517 QQLESSRSKKSIEFGIQVLSTGTWPSMMLVNL-NLPRDLSTTVEGFTAFYNTKFTGRKLSWIYNQSRGEIT-STAFKGKKYVFGATTTQMCTLLLFNEQLEYSAEKIQEATGLDTKTTQMVLGSLVKNQVLKIKGAEDVKDADKVSMNADLVLNMGYSNKKVRV------DLSKMTMAVQTAK--DQESVQKSMEEDRKNIIQAAIVRIMKTRKQCSHQKLMVELIEQL-STRFKPKVELIKKCIGSLIEKEYLKRNEDQRD-LYDYLA 773

HSP 2 Score: 80.8777 bits (198), Expect = 6.516e-12
Identity = 58/222 (26.13%), Postives = 99/222 (44.59%), Query Frame = 0 
Query:  147 KGIEALRNIFFGFVKEVGAREVKRANEEARHRQSSPLRPDMSHMLARSSLPPDYVCSDTIQTMLDLYSHYLTLVRVTFKDDSRFAKAFKTACEHFINA-----------LPNMSESLAIHAHYFLDKNCPESRMENVDVALDSIVLLFNFIQDKDLFHRSYARLLAARIISFSSVSDEAERRMMKHLMQVCGFQYAMTFQRMFMDKTLSFELSCEFAEWERE 357
            KG+EALR     +V +VG   +++  +EA                     P  YV      T+L+++  Y  LV  +F  +  F K+  TA   FIN            +    E +A +    + KN        +DV   +++ +F +++DKD+F + Y +  + R+++  S SDEAE   +  L + CGF+Y     +M  D  +S +LS  F + + E
Sbjct:  322 KGLEALRQALQDYVTKVGREALEQRCQEALQD------------------PKIYV-----HTILEVHQRYQGLVERSFSKEVGFVKSLDTAAIAFINRNAVTEKAPETRVLKSPELIARYCDLLMKKNSKMPDEMEMDVLQKNVITIFKYLEDKDIFMKFYTKHFSKRLLNEQSASDEAESSFISKLTECCGFEYTSRLAKMVQDTQVSKDLSSGFKDQQLE 520
[Close]
BLAST of EWM21928.1 vs. NCBI_GenBank
Match: gi|309357940|emb|CAP34853.2| (Protein CBG17038 [Caenorhabditis briggsae])

HSP 1 Score: 121.709 bits (304), Expect = 9.785e-25
Identity = 78/269 (29.00%), Postives = 141/269 (52.42%), Query Frame = 0 
Query:  580 RQTSGAGGEAEVEFFVFILTGGSWPYPSTGQLVQLPAPLMRCVESFSTFYDAKYKRRRLTWLHELGHGEVLFRCPASDRSYTLLVSTSQICILLLFNSRSAWSVEELQRALDLDLGELVLCLYPLLRSQVLTCR--PEVAVASKLTKHHTVVVNEGLSRRGCRLAVPRKCDEAELPSALDSPRSMDPARISPTLLNERKSAIEARVVHLMKKAGSMRHDKLIEAVLQHTRQMNFLPPVDFICEVIRADIDKDFLELAEDGPNPLYRYLA 846
            +Q   +  +  +EF + +L+ G+WP      L  LP  L   VE F+ FY+ K+  R+L+W++    GE+        + Y    +T+Q+C LLLFN +  +S E++Q A  LD     + L  L+++QVL  +   +V  A K++ +  +V+N G S +  R+      D +++  A+ + +  D   +  ++  +RK+ I+A +V +MK      H KL+  +++      F P V+ I + I + I+K++L+  ED  + LY YLA
Sbjct:  515 QQLESSRSKKSIEFGIQVLSTGTWPSMMLVNL-NLPRDLSTTVEGFTAFYNTKFTGRKLSWIYNQSRGEIT-STAFKGKKYVFGATTTQMCTLLLFNEQLEYSAEKIQEATGLDTKTTQMVLGSLVKNQVLKIKGAEDVKDADKVSMNADLVLNMGYSNKKVRV------DLSKMTMAVQTAK--DQESVQKSMEEDRKNIIQAAIVRIMKTRKQCSHQKLMVELIEQL-STRFKPKVELIKKCIGSLIEKEYLKRNEDQRD-LYDYLA 771

HSP 2 Score: 80.4925 bits (197), Expect = 6.847e-12
Identity = 58/222 (26.13%), Postives = 99/222 (44.59%), Query Frame = 0 
Query:  147 KGIEALRNIFFGFVKEVGAREVKRANEEARHRQSSPLRPDMSHMLARSSLPPDYVCSDTIQTMLDLYSHYLTLVRVTFKDDSRFAKAFKTACEHFINA-----------LPNMSESLAIHAHYFLDKNCPESRMENVDVALDSIVLLFNFIQDKDLFHRSYARLLAARIISFSSVSDEAERRMMKHLMQVCGFQYAMTFQRMFMDKTLSFELSCEFAEWERE 357
            KG+EALR     +V +VG   +++  +EA                     P  YV      T+L+++  Y  LV  +F  +  F K+  TA   FIN            +    E +A +    + KN        +DV   +++ +F +++DKD+F + Y +  + R+++  S SDEAE   +  L + CGF+Y     +M  D  +S +LS  F + + E
Sbjct:  320 KGLEALRQALQDYVTKVGREALEQRCQEALQD------------------PKIYV-----HTILEVHQRYQGLVERSFSKEVGFVKSLDTAAIAFINRNAVTEKAPETRVLKSPELIARYCDLLMKKNSKMPDEMEMDVLQKNVITIFKYLEDKDIFMKFYTKHFSKRLLNEQSASDEAESSFISKLTECCGFEYTSRLAKMVQDTQVSKDLSSGFKDQQLE 518
[Close]
BLAST of EWM21928.1 vs. NCBI_GenBank
Match: gi|551561063|ref|XP_005767425.1| (hypothetical protein EMIHUDRAFT_445703 [Emiliania huxleyi CCMP1516] >gi|551593191|ref|XP_005780572.1| hypothetical protein EMIHUDRAFT_443003 [Emiliania huxleyi CCMP1516] >gi|485617831|gb|EOD14996.1| hypothetical protein EMIHUDRAFT_445703 [Emiliania huxleyi CCMP1516] >gi|485633241|gb|EOD28143.1| hypothetical protein EMIHUDRAFT_443003 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 121.709 bits (304), Expect = 1.209e-24
Identity = 93/267 (34.83%), Postives = 134/267 (50.19%), Query Frame = 0 
Query:  588 EAEVEFFVFILTGGSWPYPSTGQLVQLPAPLMRCVESFSTFYDAKYKRRRLTWLHELGHGEVL--FRCPASDRSYTLLVSTSQICILLLFNSRSAWSVEELQRALDLDLGELVLCLYPLL--RSQVLTCRP---EVAVASKLTKHHTVVVNEGLSRRGCRLAVPRKCDEAELPSALDSPRSMDPARISPTLLNERKSAIEARVVHLMKKAGSMRHDKLI-EAVLQHTRQMNFLPPVDFICEVIRADIDKDFLELAEDGPNPLYRYLA 846
            E + +  V +LT G WP   + +L  LP  +++C+E+F  FYD +   RRL W+H LG   V+  F      + + LLVST Q CILLLFN   + +  ++Q  L+L   EL   +  L   + ++LT  P   EVA   K+T       N   S R  R+ VP       + +A  +    D  R   T+  +RK AIEA +V +MK   S+ H KL+ EA  Q  R  +F P    I + I   I +++LE     PN LY+YLA
Sbjct:  532 ELDTDLTVQVLTTGFWPTYKSDEL-NLPKEMLQCIETFKAFYDLRTSHRRLRWVHSLGSATVVGKFTPSGKSKEHDLLVSTYQACILLLFNEADSMTFSDIQGHLNLPAEELKRYVLSLCVGKYKILTKDPAGKEVAPTDKIT------YNAAFSDRARRIKVP-------MIAAKITQEEKDATR--ATVDEDRKHAIEAAIVRIMKTRKSLDHQKLVLEASTQLMR--HFKPDPKQIKKRIEDLIHREYLERDPSNPN-LYKYLA 779

HSP 2 Score: 76.6406 bits (187), Expect = 1.094e-10
Identity = 88/359 (24.51%), Postives = 154/359 (42.90%), Query Frame = 0 
Query:    5 VLRRVIGSFVALGTTLEPSHPVGFYKEQLEDHVLREVYLHYVYKAGLFAAEVSAGHADEAAVAKYIRTVEGCVAAEKA-IWEPVYPSTSRGAVRVVRKSMLESQPHHQIL-MAFANAALAFHAERLADLELLYRLLDNEDVEPTKGIEALRNIFFGFVKEVGAREVKRANEEARHRQSSPLRPDMSHMLARSSLPPDYVCSDTIQTMLDLYSHYLTLV-----RVTFKDDSRFAKAFKTACEHFINALPNMSESLAIHAHY---FLDKNCPESRMENVDVALDSIVLLFNFIQDKDLFHRSYARLLAARIISFSSVSDEAERRMMKHLMQVCGFQYAMTFQRMFMDKTLSFELSCEFAE 353
            +++ VI  FV +G +      +  Y    E+ +L     +Y        +  SA  A   +  +Y+R  E  +  E+  +   ++ ST    ++V  + +L++ P  Q+L    +         +  DL  ++RL       PT G+  + NI    + +VG   VK+ +                 + A   L P       +Q +LD++  Y  LV     +  F+  + F KA K A E F+N     S +  + +++    L K+      E ++  L+ +V LF ++ DKD+F   Y + LA R++   S SD+AER M+  L   CG Q+    + M  D  LS ++   FAE
Sbjct:  205 LIKSVIDIFVEMGGS---RASLETYATDFEEMLLSTTADYY--------SRESAKWAGNDSFPEYMRKAEDRLKQEQDRVANYLHSSTEEKLLKVCEEQLLQN-PEQQLLEKEHSGCEKLLLDNKTEDLSRMFRLFSRI---PT-GLPPIANIVRKHITDVGLALVKKQS-----------------VNAEGDLMP------YVQELLDIHDKYTELVGSGPEKGCFQGHNIFHKAMKEAFEVFVNKDIGKSATAELLSNFCDNLLKKSGERLSDEALEDKLEKVVRLFGYLSDKDIFAEFYKKQLAKRLLLARSSSDDAERSMIAKLKLRCGAQFTSKLEGMVTDMNLSQDIQSAFAE 524
The following BLAST results are available for this feature:
BLAST of EWM21928.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102275|gb|EWM21928.1|0.000e+0100.00cre-cul-1 protein, partial [Nannochloropsis gadita... [more]
gi|298710078|emb|CBJ31794.1|3.229e-3229.16similar to Cullin-1 (CUL-1) isoform 1 [Ectocarpus ... [more]
gi|748481042|ref|XP_011106675.1|1.639e-2826.80hypothetical protein H072_683 [Dactylellina haptot... [more]
gi|748516770|ref|XP_011124812.1|1.683e-2826.80hypothetical protein AOL_s00109g29 [Arthrobotrys o... [more]
gi|582955219|gb|EWC43472.1|4.268e-2826.32hypothetical protein DRE_07551 [Drechslerella sten... [more]
gi|296412591|ref|XP_002836006.1|1.385e-2525.76hypothetical protein [Tuber melanosporum Mel28] >g... [more]
gi|17552768|ref|NP_499309.1|8.778e-2529.50Cullin-1 [Caenorhabditis elegans] >gi|2493900|sp|Q... [more]
gi|268533888|ref|XP_002632074.1|9.664e-2529.00Hypothetical protein CBG17038 [Caenorhabditis brig... [more]
gi|309357940|emb|CAP34853.2|9.785e-2529.00Protein CBG17038 [Caenorhabditis briggsae][more]
gi|551561063|ref|XP_005767425.1|1.209e-2434.83hypothetical protein EMIHUDRAFT_445703 [Emiliania ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8775rna8775Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications