EWM21934.1, cds8744 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21934.1 vs. NCBI_GenBank
Match: gi|585102281|gb|EWM21934.1| (hypothetical protein Naga_100220g2 [Nannochloropsis gaditana]) HSP 1 Score: 715.687 bits (1846), Expect = 0.000e+0 Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 0
Query: 1 MWKGSASKRPKCHYQKRLFRMLVVFLLKSISCAFQGMPSLVNSGRGIDRRGPHTHVTSSIRGQADTSNVLVTSYAEDAVIWDVPVGIQRGEPPSDLKPNYVTFLGLAEVFQDQDGIKLADLFDTDDGFRHAIRVAMREDLFIPDPTRSEKVNRFLKDLGSSLHVCWEKSPTGYANLSRVFKQYGIGNLDGATFIKKLGGMAGGGPQIKDSDGFLLRQKRFGSLIDIVTAGSRLKPAHSWHQDCNLPQMTVMLGFPKTSGYLGTGVFSHAIKLSHPLKDQVPGGGQVVQYDEYEGVGKDPKLPNILPESVILRPRYGKGREIMIYDDSWHIHSAPDHIYRTSVWRFM 346
MWKGSASKRPKCHYQKRLFRMLVVFLLKSISCAFQGMPSLVNSGRGIDRRGPHTHVTSSIRGQADTSNVLVTSYAEDAVIWDVPVGIQRGEPPSDLKPNYVTFLGLAEVFQDQDGIKLADLFDTDDGFRHAIRVAMREDLFIPDPTRSEKVNRFLKDLGSSLHVCWEKSPTGYANLSRVFKQYGIGNLDGATFIKKLGGMAGGGPQIKDSDGFLLRQKRFGSLIDIVTAGSRLKPAHSWHQDCNLPQMTVMLGFPKTSGYLGTGVFSHAIKLSHPLKDQVPGGGQVVQYDEYEGVGKDPKLPNILPESVILRPRYGKGREIMIYDDSWHIHSAPDHIYRTSVWRFM
Sbjct: 1 MWKGSASKRPKCHYQKRLFRMLVVFLLKSISCAFQGMPSLVNSGRGIDRRGPHTHVTSSIRGQADTSNVLVTSYAEDAVIWDVPVGIQRGEPPSDLKPNYVTFLGLAEVFQDQDGIKLADLFDTDDGFRHAIRVAMREDLFIPDPTRSEKVNRFLKDLGSSLHVCWEKSPTGYANLSRVFKQYGIGNLDGATFIKKLGGMAGGGPQIKDSDGFLLRQKRFGSLIDIVTAGSRLKPAHSWHQDCNLPQMTVMLGFPKTSGYLGTGVFSHAIKLSHPLKDQVPGGGQVVQYDEYEGVGKDPKLPNILPESVILRPRYGKGREIMIYDDSWHIHSAPDHIYRTSVWRFM 346
BLAST of EWM21934.1 vs. NCBI_GenBank
Match: gi|303290066|ref|XP_003064320.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226453918|gb|EEH51225.1| predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 214.542 bits (545), Expect = 5.069e-63 Identity = 118/273 (43.22%), Postives = 160/273 (58.61%), Query Frame = 0
Query: 76 EDAVIWDVPVGIQRGEPPSDLKPNYVTFLGLAEVFQDQDGIKLADLFDTDDGFRHAIRVAMREDLFIPDPTRSEKVNRFLKDLGSSLHVCWEKSPTGYANLSRVFKQYGIGNLDGATFIKKLGGMAGGGPQIKDSDGFLLRQKRFGSLIDIVTAGSRLKPAHSWHQDCNLPQMTVMLGFPKTSGYLGTGVFSHAIKLSHPLK--DQVPGGGQVVQYDEYEGVGKDPKLPNILPESVILRPRYGKGREIMIYDDSWHIHSAPDHIYRTSVWRFM 346
+D +++VP ++R S +VTF GL E+F G L + F+ FR AIR AMRED+F+PDP++S+K+N + LG S+ V W++S +GYA L++VF+ G+ + G FI LGG+ G + GSLIDI G R K HSWHQD L + TVMLGFP + G+ G GVFSHA KLSHPL+ D G V+Q+++++ LP VI RP Y G E+M+Y D+ H+HSAPD R SVWRFM
Sbjct: 146 DDVEVYEVPDDLRRAG--SSRVEEHVTFYGLDELFP---GSGLGETFNASAAFRTAIRAAMREDMFVPDPSKSDKINTAISSLGCSVMVNWKRSKSGYAALTKVFESNGVRGVTGEAFILALGGLCG--------------TESHGSLIDITGTGRR-KERHSWHQDSGLDRRTVMLGFPPSDGFDGVGVFSHAAKLSHPLRRADGDDAEGAVIQWEDFDA--------GELPVEVIGRPEYRPGHEVMVYCDATHVHSAPDETNRESVWRFM 390
BLAST of EWM21934.1 vs. NCBI_GenBank
Match: gi|255074771|ref|XP_002501060.1| (predicted protein [Micromonas commoda] >gi|226516323|gb|ACO62318.1| predicted protein [Micromonas commoda]) HSP 1 Score: 205.682 bits (522), Expect = 1.409e-60 Identity = 120/270 (44.44%), Postives = 158/270 (58.52%), Query Frame = 0
Query: 77 DAVIWDVPVGIQRGEPPSDLKPNYVTFLGLAEVFQDQDGIKLADLFDTDDGFRHAIRVAMREDLFIPDPTRSEKVNRFLKDLGSSLHVCWEKSPTGYANLSRVFKQYGIGNLDGATFIKKLGGMAGGGPQIKDSDGFLLRQKRFGSLIDIVTAGSRLKPAHSWHQDCNLPQMTVMLGFPKTSGYLGTGVFSHAIKLSHPLKDQVPGGGQVVQYDEYEGVGKDPKLPNILPESVILRPRYGKGREIMIYDDSWHIHSAPDHIYRTSVWRFM 346
D ++DVP ++R P ++ +V F GL E+F L + F+ D FR AIR A+R+DLF+PDP S+KVN + L SSL V W+ S TGYA+L++VF + NL G FI+ LG + G GSLIDI + G R + HSWHQD L + TVM+GFP S + G GVFSH+ KLSHPL+ Q G+V+Q+++YE LP S I RP Y GRE+M+Y D+ H+HSAPD R SVWRFM
Sbjct: 58 DVEVFDVPSDLRR--PGAEAVVEHVKFFGLEELFP---STGLQEKFNADAAFRTAIRRAIRDDLFVPDPNASDKVNAAISSLSSSLMVNWKSSRTGYASLTKVFADNAVQNLTGENFIQTLGKLCG--------------PVSHGSLIDITSTG-RKQERHSWHQDSGLDRFTVMVGFPPESNWTGVGVFSHSCKLSHPLR-QDGDEGEVIQWEDYEA--------GELPVSAIGRPEYSPGREVMVYCDATHLHSAPDETNRESVWRFM 298
BLAST of EWM21934.1 vs. NCBI_GenBank
Match: gi|308808294|ref|XP_003081457.1| (unnamed protein product [Ostreococcus tauri] >gi|116059920|emb|CAL55979.1| unnamed product [Ostreococcus tauri]) HSP 1 Score: 181.415 bits (459), Expect = 1.013e-50 Identity = 113/275 (41.09%), Postives = 156/275 (56.73%), Query Frame = 0
Query: 76 EDAVIWDVPVGIQRGEPPSDLKPNYVTFLGLAEVFQDQDGIKLADLFDTDDGFRHAIRVAMREDLFIPDPTRSEKVNRFLKDLGSSLHVCWEKSPTGYANLSRVFKQYGIGNLDGATFIKKLGGMAGGGPQIKDSDGFLLRQKRFGSLIDIVTAGSRLKPAHSWHQDCNLPQMTVMLGFPKTSGYL----GTGVFSHAIKLSHPLKDQVPGGGQVVQYDEYEGVGKDPKLPNILPESVILRPRYGKGREIMIYDDSWHIHSAPDHIYRTSVWRFM 346
EDA +++VP ++R P S +V L +VF G LAD F D FR +R+AMR+DLF+P+ SE N ++ L SS+HV W +S TGYA LS F ++G+ NL G FIK LG + G + G+LIDI + G + K HSWHQD + TVMLGFP ++ G GVF+HA+KLSHPL Q+ G V+Q++++ D + + RP + +G+EIM+Y DS IHSAPD +R +VWRFM
Sbjct: 92 EDARVYEVPERLRR--PGSVENDTFVVHKSLEDVFP---GSGLADAFHGDGRFRTGVRLAMRDDLFVPNEKLSEARNATMRALSSSVHVNWFESRTGYAALSAHFARHGV-NLTGERFIKGLGALCG--------------EPCHGTLIDIASIG-KQKIRHSWHQDSGYDRFTVMLGFPASTPSEDPPPGVGVFTHAVKLSHPLV-QLGDDGSVIQWEDFVPYEGD------FADEYVARPVFKRGQEIMVYRDSAIIHSAPDQSHREAVWRFM 338
BLAST of EWM21934.1 vs. NCBI_GenBank
Match: gi|1199288338|gb|OUS43480.1| (hypothetical protein BE221DRAFT_194926 [Ostreococcus tauri]) HSP 1 Score: 181.03 bits (458), Expect = 1.104e-50 Identity = 113/275 (41.09%), Postives = 156/275 (56.73%), Query Frame = 0
Query: 76 EDAVIWDVPVGIQRGEPPSDLKPNYVTFLGLAEVFQDQDGIKLADLFDTDDGFRHAIRVAMREDLFIPDPTRSEKVNRFLKDLGSSLHVCWEKSPTGYANLSRVFKQYGIGNLDGATFIKKLGGMAGGGPQIKDSDGFLLRQKRFGSLIDIVTAGSRLKPAHSWHQDCNLPQMTVMLGFPKTSGYL----GTGVFSHAIKLSHPLKDQVPGGGQVVQYDEYEGVGKDPKLPNILPESVILRPRYGKGREIMIYDDSWHIHSAPDHIYRTSVWRFM 346
EDA +++VP ++R P S +V L +VF G LAD F D FR +R+AMR+DLF+P+ SE N ++ L SS+HV W +S TGYA LS F ++G+ NL G FIK LG + G + G+LIDI + G + K HSWHQD + TVMLGFP ++ G GVF+HA+KLSHPL Q+ G V+Q++++ D + + RP + +G+EIM+Y DS IHSAPD +R +VWRFM
Sbjct: 90 EDARVYEVPERLRR--PGSVENDTFVVHKSLEDVFP---GSGLADAFHGDGRFRTGVRLAMRDDLFVPNEKLSEARNAAMRALSSSVHVNWFESRTGYAALSAHFARHGV-NLTGERFIKGLGALCG--------------EPCHGTLIDIASIG-KQKIRHSWHQDSGYDRFTVMLGFPASTPSEDPPPGVGVFTHAVKLSHPLV-QLGDDGSVIQWEDFVPYEGD------FADEYVARPVFKRGQEIMVYRDSAIIHSAPDQSHREAVWRFM 336
BLAST of EWM21934.1 vs. NCBI_GenBank
Match: gi|145351016|ref|XP_001419884.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144580117|gb|ABO98177.1| predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 174.866 bits (442), Expect = 1.305e-48 Identity = 105/277 (37.91%), Postives = 151/277 (54.51%), Query Frame = 0
Query: 76 EDAVIWDVPVGIQRGEPPSDLKPNYVTFLGLAEVFQDQDGIKLADLFDTDDGFRHAIRVAMREDLFIPDPTRSEKVNRFLKDLGSSLHVCWEKSPTGYANLSRVFKQYGIGNLDGATFIKKLGGMAGGGPQIKDSDGFLLRQKRFGSLIDIVTAGSRLKPAHSWHQDCNLPQMTVMLGFPKTSGY------LGTGVFSHAIKLSHPLKDQVPGGGQVVQYDEYEGVGKDPKLPNILPESVILRPRYGKGREIMIYDDSWHIHSAPDHIYRTSVWRFM 346
+D +++VP ++R + + +V + L +F G AD F D FR +R AMR+DLF+PD S + N + L SS+HV W +S TGYA LS +F GI ++ G FI+ LGG+ G + R G+LIDI + K +HSWHQD ++TVMLGFP + G GVFSHA+KLSH L+ P G V+Q+++ +D +L + RP + + REI++Y DS +HSAPD +R +VWRFM
Sbjct: 54 DDVEVFEVPETLRRDGAARNER--FVEHVSLEGLF----GATFADAFHDDASFRTDVRRAMRKDLFVPDENLSAEANAAMSALSSSVHVNWFESRTGYAALSALFASRGIEDVTGERFIRALGGLCG--------------EPRHGTLIDIASPVGARKISHSWHQDSGYDRLTVMLGFPAAAPSESMGLPSGVGVFSHAVKLSHALRRPSPPGA-VLQWEDVAS-ARDVRLDARF----VARPAFARHREIIVYRDSSILHSAPDVAHREAVWRFM 304
BLAST of EWM21934.1 vs. NCBI_GenBank
Match: gi|612389622|ref|XP_007510332.1| (predicted protein [Bathycoccus prasinos] >gi|412992697|emb|CCO18677.1| predicted protein [Bathycoccus prasinos]) HSP 1 Score: 159.073 bits (401), Expect = 6.198e-42 Identity = 102/258 (39.53%), Postives = 145/258 (56.20%), Query Frame = 0
Query: 101 VTFLGLAEVFQDQDGIKLADLFDTDDGFRHAIRVAMREDLFIPDPTRSEKVNRFLKDLGSSLHVCWEKSP--TGYANLSRVFKQYGIGNLDGATFIKKLGGMAGGGPQIKDSDGFLLRQKRFGSLIDIVT-AGSRLKPAHSWHQDCNLP-QMTVMLGFP----KTSGYLGTGVFSHAIKLSHPL---KDQVPGGGQVVQYDEYE-GVGKDPKLPNILPESVILRPRYGKGREIMIYDDSWHIHSAPDHIYRTSVWRFM 346
+ F+ L+E+F + + +F + FR A+R AMREDLF SE N+ +K L SSL V W + P + L+++FK+Y I +L G FI+++ + G P GSLIDI A +R K HSWHQD L + TVMLGFP + + L GVFSHA++LSH + D+V G V++++ + G +D ++ ES I+RP YG +EIM+Y D+ IHSAPD I R +VWRFM
Sbjct: 141 IRFVSLSELFPE---TGFSQIFHREACFRTAVRAAMREDLFKESALLSENQNKAIKSLNSSLMVPWGQIPKDSELNALTKLFKEYKISDLTGKKFIEEITKLCGSNPH--------------GSLIDISNPALNRKKMKHSWHQDSGLDDRFTVMLGFPSENLRNANELKEGVFSHAVRLSHRVFWPNDEV---GSVIEWESFPCGEPRDHEIA----ESYIIRPLYGINQEIMVYCDAKVIHSAPDFINREAVWRFM 374
BLAST of EWM21934.1 vs. NCBI_GenBank
Match: gi|551543997|ref|XP_005760114.1| (hypothetical protein EMIHUDRAFT_218205 [Emiliania huxleyi CCMP1516] >gi|485608386|gb|EOD07685.1| hypothetical protein EMIHUDRAFT_218205 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 146.747 bits (369), Expect = 3.479e-38 Identity = 91/245 (37.14%), Postives = 127/245 (51.84%), Query Frame = 0
Query: 115 GIKLADLFDTDDGFRHAIRVAMREDLFIP------DPTRSEKVNRFLKDLGSSLHVCWEKSPTGYAN-------LSRVFKQYGIGNLDGATFIKKLGGMAGGGPQIKDSDGFLLRQKRFGSLIDIVTAGSRLKPAHSWHQDCNLPQMTVMLGFPKTSGYLGTGVFSHAIKLSHPLKDQVPGGGQVVQYDEYEGVGKDPKLPNILPESVILRPRYGKGREIMIYDDSWHIHSAPDHIYRTSVWRFM 346
G LAD +D R A+R A+R+DL P P R+ ++ LG++ V W + +A + F +G+ L G FI+ LG + G P GSLIDI+ R+ AHSWHQD LP+ TV+LGFP GY G GVFSH ++LSHPL+ G + EYE + P P+ + ++ +LRP Y KGRE+ + +D+ H+HS PD R +VWRFM
Sbjct: 59 GSGLADAWDERASLRTAVRQALRDDLMAPLLRGVGGPKRACALS-----LGTACMVSWSNALAAHAEGKVDFSRFTAAFADHGV-RLSGEAFIRSLGELCGATPH--------------GSLIDIIPLDRRV--AHSWHQDSGLPRDTVLLGFPPRDGYEGGGVFSHCVQLSHPLRPS--AGDEHGAVVEYERLSDPP--PDRIDDAFVLRPLYSKGREVWVSNDAHHLHSTPDRQLREAVWRFM 277
BLAST of EWM21934.1 vs. NCBI_GenBank
Match: gi|223996347|ref|XP_002287847.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976963|gb|EED95290.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 115.161 bits (287), Expect = 1.935e-25 Identity = 105/328 (32.01%), Postives = 139/328 (42.38%), Query Frame = 0
Query: 46 GIDRRGPHT--HVTSSIRGQADTSNVLVTSYA--EDAVIWDVPVGIQRGEPPSDLKPNYVTFLGLAEVFQDQDGIKLADLFDTDDGFRHAIRVAMREDLFIPDPT---RSEKVNRFLKDLGSSLHVCWEKSPTGYANLSRVFKQYGIGNLDGAT-----------FIKKLGGMAGGGPQIKDSDGFLLRQKRFGSLIDIVTAGSRLKPAHSWHQDCNLP----QMTVMLGFPKTSGYLGTGVFSHAIKLSHPLKDQVPGGGQVVQYDEYEGVGKDPKLPNILP-----ESVILRPRYGKGREIMIYDDSWHIHSAPDHIYRTSVWRFM 346
G RR PH H R D V S EDA ++ P + + + ++V + L ++F G+ +D F +D FR AIR AMRED+F P SEK L SSL W+ A+ G+ DGA+ LG A G + + G L K IDIV R P HSWHQD TV+LGFPK Y G GVFSH++ L +Y+ P P I P E I+RP++ KGRE++++ D +HS+PD YR SV RFM
Sbjct: 79 GERRRAPHQFDHTKEEARPFLDDPVAFVKSQTANEDAPLYVFPEDENNTQLTAIPEGSHVVSMSLDDLFP---GLDFSDKFFSDGEFRTAIRGAMREDVFDSTPQYSGMSEKARNMLLLPDSSLQGSWKCKHLTEAS----------GSEDGASPALRMRKLTDVLKANLGDDAPTGDEFMEKIGSLCGSKPSTHWIDIVGVLDRRIP-HSWHQDTGRSYGGDSKTVLLGFPKEDKYEGVGVFSHSVNL---------------KYERIASNEHPPNEPVIYPGLTIDEEYIVRPKFAKGRELILFRDIDTLHSSPDVAYRASVMRFM 377
BLAST of EWM21934.1 vs. NCBI_GenBank
Match: gi|397635279|gb|EJK71796.1| (hypothetical protein THAOC_06730, partial [Thalassiosira oceanica]) HSP 1 Score: 107.457 bits (267), Expect = 1.178e-23 Identity = 83/243 (34.16%), Postives = 115/243 (47.33%), Query Frame = 0
Query: 122 FDTDDGFRHAIRVAMREDLFIPDPTRS---EKVNRFLKDLGSSLHVCW-------EKSPTGYANLSRVFKQYGIGNL--DGATFIKKLGGMAGGGPQIKDSDGFLLRQKRFGSLIDIVTAGSRLKPAHSWHQDC----NLPQMTVMLGFPKTSGYLGTGVFSHAIKLSHP--LKDQVPGGGQVVQYDEYEGVGKDPKLPNILPESVILRPRYGKGREIMIYDDSWHIHSAPDHIYRTSVWRFM 346
F + + FR A+R AMRED+F P+ S EK R L SS+ W E L+ V K+Y ++ G F++ +G + G P IDIV R P HSWHQD N TV+LGFPK Y G GVFSHA+KL + + P VV PKL + ++ +++PR+ +G EI+++ D +HSAPD +R+SV RFM
Sbjct: 38 FCSSNSFRSAMRHAMREDIFDSTPSYSGLSEKARRMLLLPDSSIQGSWNCKQFTSEDGQCRMKKLTEVLKEYLGEDVAPSGDEFMETVGALCGSKPSTH--------------WIDIVGVLDRRVP-HSWHQDTGRSPNGDTKTVLLGFPKEDNYDGAGVFSHAVKLKYERVAPEDHPTNEPVVY----------PKLE--VDDAYVVKPRFAEGSEIVVFRDIDIVHSAPDVAFRSSVMRFM 253 The following BLAST results are available for this feature:
BLAST of EWM21934.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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