EWM21930.1, cds8742 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21930.1 vs. NCBI_GenBank
Match: gi|585102277|gb|EWM21930.1| (Protein of unknown function DUF3611 [Nannochloropsis gaditana]) HSP 1 Score: 580.096 bits (1494), Expect = 0.000e+0 Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0 Query: 1 MVRRLSSFLPCLAVASIFLFSVGHAYFLSNIPARLVHAQQALHLYPRHNLKLAPPSLFATQKGFGVLPALKAASLNADSDPAATLKSDGLKIELRQYSKFLHSTAWFSWWAQVICNTVAGVILFFTNSFVAPSGGGPSLAAKSIFSNGYIFAAGGLCLGAISIFWTWGFTGVAKRIRRAVLEPPTSLAMVRRVVRTAIVINLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVINQSAMGGAIASPTVQPVDIFVIQANTNILLSHFISLVSSLLLLLRYSKISRAARGSG 291 MVRRLSSFLPCLAVASIFLFSVGHAYFLSNIPARLVHAQQALHLYPRHNLKLAPPSLFATQKGFGVLPALKAASLNADSDPAATLKSDGLKIELRQYSKFLHSTAWFSWWAQVICNTVAGVILFFTNSFVAPSGGGPSLAAKSIFSNGYIFAAGGLCLGAISIFWTWGFTGVAKRIRRAVLEPPTSLAMVRRVVRTAIVINLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVINQSAMGGAIASPTVQPVDIFVIQANTNILLSHFISLVSSLLLLLRYSKISRAARGSG Sbjct: 1 MVRRLSSFLPCLAVASIFLFSVGHAYFLSNIPARLVHAQQALHLYPRHNLKLAPPSLFATQKGFGVLPALKAASLNADSDPAATLKSDGLKIELRQYSKFLHSTAWFSWWAQVICNTVAGVILFFTNSFVAPSGGGPSLAAKSIFSNGYIFAAGGLCLGAISIFWTWGFTGVAKRIRRAVLEPPTSLAMVRRVVRTAIVINLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVINQSAMGGAIASPTVQPVDIFVIQANTNILLSHFISLVSSLLLLLRYSKISRAARGSG 291
BLAST of EWM21930.1 vs. NCBI_GenBank
Match: gi|553182023|ref|XP_005853665.1| (hypothetical protein NGA_0454000 [Nannochloropsis gaditana CCMP526] >gi|422295398|gb|EKU22697.1| hypothetical protein NGA_0454000 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 578.941 bits (1491), Expect = 0.000e+0 Identity = 290/291 (99.66%), Postives = 291/291 (100.00%), Query Frame = 0 Query: 1 MVRRLSSFLPCLAVASIFLFSVGHAYFLSNIPARLVHAQQALHLYPRHNLKLAPPSLFATQKGFGVLPALKAASLNADSDPAATLKSDGLKIELRQYSKFLHSTAWFSWWAQVICNTVAGVILFFTNSFVAPSGGGPSLAAKSIFSNGYIFAAGGLCLGAISIFWTWGFTGVAKRIRRAVLEPPTSLAMVRRVVRTAIVINLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVINQSAMGGAIASPTVQPVDIFVIQANTNILLSHFISLVSSLLLLLRYSKISRAARGSG 291 MVRRLSSFLPCLAVASIFLFSVGHAYFLSNIPARLVHAQQALHLYPRHNLKLAPPSLFATQKGFGVLPAL+AASLNADSDPAATLKSDGLKIELRQYSKFLHSTAWFSWWAQVICNTVAGVILFFTNSFVAPSGGGPSLAAKSIFSNGYIFAAGGLCLGAISIFWTWGFTGVAKRIRRAVLEPPTSLAMVRRVVRTAIVINLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVINQSAMGGAIASPTVQPVDIFVIQANTNILLSHFISLVSSLLLLLRYSKISRAARGSG Sbjct: 1 MVRRLSSFLPCLAVASIFLFSVGHAYFLSNIPARLVHAQQALHLYPRHNLKLAPPSLFATQKGFGVLPALEAASLNADSDPAATLKSDGLKIELRQYSKFLHSTAWFSWWAQVICNTVAGVILFFTNSFVAPSGGGPSLAAKSIFSNGYIFAAGGLCLGAISIFWTWGFTGVAKRIRRAVLEPPTSLAMVRRVVRTAIVINLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVINQSAMGGAIASPTVQPVDIFVIQANTNILLSHFISLVSSLLLLLRYSKISRAARGSG 291
BLAST of EWM21930.1 vs. NCBI_GenBank
Match: gi|298705310|emb|CBJ49000.1| (CHloroplast inner membrane protein TIC 21 [Ectocarpus siliculosus]) HSP 1 Score: 141.354 bits (355), Expect = 7.435e-37 Identity = 83/211 (39.34%), Postives = 118/211 (55.92%), Query Frame = 0 Query: 87 SDGLKI-------ELRQYSKFLHSTAWFSWWAQVICNTVAGVILFFTNSFVAPSGGGPSLAAKSIFSNGYIFAAGGLCLGAISIFWTWGFTGVAKRIRR--AVLEPPTSLAMVRRVVRTAIVINLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVINQSAMGGAIASPTVQPVDIFVIQANTNILLSHFISLVSSLLLLLRYSKISRAAR 288 SDG +I +L++ + +W SWWAQ I +TVA +IL F+N+ S G +I NG A L A SI WTWG+ AK R + E + +R +R + IN+ G+L AL+GAEQ VG L+A+VL QGF P V+ +A +A + +D+F++QANTN LLSHF SL +SL LL R K+++ A+ Sbjct: 60 SDGEEILDRSVVKQLKRSTTVFRQVSWLSWWAQTILSTVAFIILLFSNAVTNRSTRG------NILGNGVALAVASLACSAASICWTWGYNLKAKGWRNLGTLAEVDDAQVRMRSSLRMGLYINVAGMLLALVGAEQIVGTLVAKVLYAQGFQPSVMVGTAGAAEVAQAQFRALDVFIVQANTNTLLSHFCSLAASLWLLARTPKLAKLAK 264
BLAST of EWM21930.1 vs. NCBI_GenBank
Match: gi|219127240|ref|XP_002183847.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404570|gb|EEC44516.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 121.709 bits (304), Expect = 2.159e-28 Identity = 78/205 (38.05%), Postives = 111/205 (54.15%), Query Frame = 0 Query: 76 NADSDPAATLKSDGLKIELRQYSKFLHSTAWFSWWAQVICNTVAGVILFFTNSFV---APSGGGPSLAAKSIFSNGYIFAAGGLCLGAISIFWTWGFTGVAKRIRRAVLEPPTSLA-MVRRVVRTAIVINLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVINQSAMGGAIASPTVQPVDIFVIQANTNILLSHFISLVSSLLL 276 + D +P +D + +++ S L +WFSWW+Q+I TV+ VIL F+ S V A G PS ++ + G+ + A SI WTWG R + A M RR VR + +NL+GLL L+ AE+ VG L +VL+ + F P Q+A+ G++ +QP+DI V+QANTN LLSHF SLVS L L Sbjct: 179 DGDEEPPFQATTD---LVVKETSLVLKRVSWFSWWSQIILTTVSAVILSFSRSVVGRNATVGPVPS----------FLLSGAGVLISACSIIWTWGNGARLSRRLLRRPTTRSQAADMFRRAVRVGVTLNLIGLLVTLLAAEEIVGALAIKVLTNRNFGP----QAALLGSVEG-QLQPLDILVVQANTNTLLSHFCSLVSLLYL 365
BLAST of EWM21930.1 vs. NCBI_GenBank
Match: gi|1210513841|dbj|GAX27140.1| (hypothetical protein FisN_13Lh310 [Fistulifera solaris]) HSP 1 Score: 108.997 bits (271), Expect = 1.247e-24 Identity = 75/187 (40.11%), Postives = 96/187 (51.34%), Query Frame = 0 Query: 98 SKFLHSTAWFSWWAQVICNTVAGVILFFTNSFVAPSGGGPSLAAKSIFSNGYIFAAG-GLCLGAISIFWTWGFTGVAKRIRRAVLEPPTSLA-MVRRVVRTAIVINLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVINQSAMGGAIASPTVQPVDIFVIQANTNILLSHFISLVSSLLLLLRYSK 282 SK L +WFSWW+QVI +V+GVIL F + S S F F +G GL + A+SI WTWG R P A M+RR V+ + INL+GLL L+ AE+ VG L VL+ + S+ VQP+D+ V+QANTN LLSHF SL S LL Y+K Sbjct: 78 SKSLRRVSWFSWWSQVILTSVSGVILGFARRTLVQRSTALSTGGTSSF-----FLSGIGLLVSAVSILWTWGNGSRLSRRLVRRSLPRAKAAHMLRRAVQVGVTINLVGLLVHLLAAEEIVGTLALHVLT---------SSSSRNAMFPEGLVQPLDVLVVQANTNSLLSHFCSLAS----LLFYTK 246
BLAST of EWM21930.1 vs. NCBI_GenBank
Match: gi|551661148|ref|XP_005833341.1| (translocon at the inner envelope membrane of chloroplast 21 like protein, partial [Guillardia theta CCMP2712] >gi|428177481|gb|EKX46361.1| translocon at the inner envelope membrane of chloroplast 21 like protein, partial [Guillardia theta CCMP2712]) HSP 1 Score: 105.531 bits (262), Expect = 4.801e-24 Identity = 73/202 (36.14%), Postives = 102/202 (50.50%), Query Frame = 0 Query: 101 LHSTAWFSWWAQVICNTVAGVILFFTNSFVAPSGGGPSLAAKSIFSNGYIFAAGGLCLGAISIFWTWGFTGVAKRIRRAVLEPPTSLAMVR---RVVRTAIVINLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVINQSAMGGAIASPTV-----------------------QPVDIFVIQANTNILLSHFISLVSSLLL 276 + ++W SWWAQVI + ++ + LFF N+ P G +I +NG A GL L I++ WT G+ +RI LE P + R R VR +++ L G+ L+GAEQ VG L+A+ +S S L+ N GG IA+ T Q +DIFV+QANTN LLSH SLV+SL + Sbjct: 1 IRQSSWLSWWAQVILSVISAITLFFANAVRGPMQG-------NILANGVFMAGLGLALSFINVIWTTGY----QRIAAKQLETPEAAMSFRSFSRTVRVGVIVALTGMFLTLLGAEQIVGTLVAKSISG---SILIAN----GGGIAAQTASLQLQVCSFIDPRQLGFRTECCWQALDIFVVQANTNTLLSHLSSLVNSLFI 184
BLAST of EWM21930.1 vs. NCBI_GenBank
Match: gi|1210513204|dbj|GAX27601.1| (hypothetical protein FisN_13Hh310 [Fistulifera solaris]) HSP 1 Score: 106.686 bits (265), Expect = 7.609e-24 Identity = 77/188 (40.96%), Postives = 99/188 (52.66%), Query Frame = 0 Query: 98 SKFLHSTAWFSWWAQVICNTVAGVILFFTNSFVAPSGGGPSLAAKSIFSNGYIFAAG-GLCLGAISIFWTWGFTGVAKRIRRAVLEPPTSLA--MVRRVVRTAIVINLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVINQSAMGGAIASPTVQPVDIFVIQANTNILLSHFISLVSSLLLLLRYSK 282 SK L +WFSWW+QVI +V+GVIL F + S S F F +G GL + A+SI WTWG G R P + A M+RR V+ + INL+GLL L+ AE+ VG L +VL+ + S+ VQP+DI V+QANTN LLSHF SL S LL Y+K Sbjct: 69 SKSLRRVSWFSWWSQVILTSVSGVILGFARRTLVQRNTALSTGGTSSF-----FLSGIGLIVSAVSILWTWG-NGSRLSRRLIRRPLPRAKAAHMLRRAVQVGVTINLVGLLVHLLAAEEIVGTLALQVLT---------SSSSRNAMFPEGLVQPLDILVVQANTNSLLSHFCSLAS----LLFYTK 237
BLAST of EWM21930.1 vs. NCBI_GenBank
Match: gi|223998748|ref|XP_002289047.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976155|gb|EED94483.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 98.5969 bits (244), Expect = 1.116e-20 Identity = 65/191 (34.03%), Postives = 100/191 (52.36%), Query Frame = 0 Query: 98 SKFLHSTAWFSWWAQVICNTVAGVILFFTNSFVAPSGGGPSLAAKSIFSNGYIFAAGGLCLGAISIFWTWG---------FTGVAKRIRRAVLEPPTSLAMVRRVVRTAIVINLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVINQSAMGGAIASPTVQPVDIFVIQANTNILLSHFISLVSSLLLLLR 279 SK L +++W SWW+Q+I V+ + F + + P +K ++ ++ G+ +SI WTWG R+ A L +RRV+ + INL+GLLT+L+GA+ VG L+A+ + MGG +AS T+QP+D+ V+QANTNIL SHF+S+ + LL L R Sbjct: 86 SKSLTASSWLSWWSQLILTVVSSITFVFARNVMESQTVSPLEFSK--VASKFVLPGVGIVTSVMSIIWTWGGRRLARRFVRRSQTSRVEAANL--------LRRVITVGVTINLIGLLTSLLGAQYIVGTLVAKAMQNVVGF-----GGGMGGMVASQTLQPLDVLVVQANTNILTSHFVSM-ACLLWLTR 260
BLAST of EWM21930.1 vs. NCBI_GenBank
Match: gi|873241537|emb|CEL92434.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 97.4413 bits (241), Expect = 3.632e-20 Identity = 63/211 (29.86%), Postives = 107/211 (50.71%), Query Frame = 0 Query: 77 ADSDPAATLKSDGLKIELRQYSKFLHSTAWFSWWAQVICNTVAGVILFFTNSFVAPSGGGPSLAAKSIFSNGYIFAAGGLCLGAISIFWTWGFTGVAKRIRRAVLEPPTSLAMVRRVVRTAIVINLLGLLTALIGAEQFVGNLMARVL--SQQGFSPLVINQSAMGGAIASPTVQPVDIFVIQANTNILLSHFISLVSSLLLLLRYSKISR 285 AD AA + ++ +L+ + L + AW+SWW Q+ V+ IL F N+ L NG A + +S+ WT+G+T ++ +RR P ++ ++ +R+ + INL+GLL +++ AEQ VG L +++L SQ F T+QP+DI V+QANTN ++H + L++SL L R ++ + Sbjct: 18 ADRSSAAPKERTAVQ-QLQVVRRALWNVAWWSWWPQLALTVVSASILIFANTI------SEYLTLTQAILNGTALAGVAVFFSILSLIWTYGYTRLSLDLRRTA--PSKAVVSIKHWLRSGVWINLIGLLLSMVSAEQIVGVLFSKILRMSQLVFGGGPGGVVRFSAPTGGLTLQPLDILVVQANTNTSVAHLVGLLTSLWLATRNERLQQ 219
BLAST of EWM21930.1 vs. NCBI_GenBank
Match: gi|504987065|ref|WP_015174167.1| (DUF3611 domain-containing protein [Oscillatoria nigro-viridis] >gi|428239045|gb|AFZ04831.1| hypothetical protein Osc7112_0198 [Oscillatoria nigro-viridis PCC 7112]) HSP 1 Score: 95.5153 bits (236), Expect = 3.950e-20 Identity = 63/199 (31.66%), Postives = 106/199 (53.27%), Query Frame = 0 Query: 85 LKSDGLKIELRQYSKFLHSTAWFSWWAQVICNTVAGVILFFTNSFVAPSGGGPSLAAKSIFSNGYIFAAGGLCLGAISIFWTWGFTGVAKRIRRAVLEPPTSLAMVRRVVRTAIVINLLGLLTALIGAEQFVGNLMARVLSQQGFSPLVINQSAMGGAIA-SPTVQPVDIFVIQANTNILLSHFISLVSSLLLLLRYSK 282 L +D L + +++ + L +T W +W Q++ VAG+IL F F PS + + + G FA GL + A S++ ++ FT +++++R A + VR +++ NL G+L LIGAE G L+A+ L+Q Q+ G A+ +QP+DIFV+ ANT+ ++HF+ + +L LL R K Sbjct: 5 LDNDKLPVAVQRVAFALRTTGWVCFWVQLVLAVVAGIILLFAIPFAIPSATTAAGSNSAGTGGGVFFAICGLAVLAYSVYRSFRFTRLSRQLRSPANAVRPKKADTIKEVRLSLMSNLSGMLLTLIGAEAISGTLLAKSLAQP--------QALFGAAVDLGRFIQPLDIFVVLANTHATVAHFVGIFGALWLLDRIHK 195 The following BLAST results are available for this feature:
BLAST of EWM21930.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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