EWM21940.1, cds8733 (CDS) Nannochloropsis gaditana

Overview
NameEWM21940.1
Unique Namecds8733
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:110021..110497 -
Alignment locationKK037250.1:108974..109504 -
Alignment locationKK037250.1:108762..108863 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21940.1
Producte1a binding protein p400
Orig transcript idgnl|cribi|Naga_101595g1.2717.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:110021..110497 -
KK037250.1supercontigKK037250.1:108974..109504 -
KK037250.1supercontigKK037250.1:108762..108863 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR000330SNF2_N
IPR001650Helicase_C
Homology
BLAST of EWM21940.1 vs. NCBI_GenBank
Match: gi|585102289|gb|EWM21940.1| (e1a binding protein p400 [Nannochloropsis gaditana])

HSP 1 Score: 748.814 bits (1932), Expect = 0.000e+0
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0
Query:    1 MELWSLMHFLMPHLFRSRKEFSYWFSNPLNSMVQGARALSDGLIRRLHTIMRPFLLRRLKKDVEKQLPGKFEHVVLCPLSRRQAHLYEEFMARSSTRAALAGGNFMGMMNVLMQLRKVCNHPDLFEARPIRSPYAMDPLALPVPALALDLLSPSSPLARALLHALKLDQDRARDLGPLIERFTCVVPRVRSSFPILLSSSARPPSLPPALHPPLRHLRTRLLRPYHPAALRQSLLFPDKWLVQFDAGKLQTLARLLLSLKRGHHRVLIFTQMTKMLDVLEQFLNLNGHVYLRLDGATGVDRRQKLMDRFNNDERIFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYR 369
            MELWSLMHFLMPHLFRSRKEFSYWFSNPLNSMVQGARALSDGLIRRLHTIMRPFLLRRLKKDVEKQLPGKFEHVVLCPLSRRQAHLYEEFMARSSTRAALAGGNFMGMMNVLMQLRKVCNHPDLFEARPIRSPYAMDPLALPVPALALDLLSPSSPLARALLHALKLDQDRARDLGPLIERFTCVVPRVRSSFPILLSSSARPPSLPPALHPPLRHLRTRLLRPYHPAALRQSLLFPDKWLVQFDAGKLQTLARLLLSLKRGHHRVLIFTQMTKMLDVLEQFLNLNGHVYLRLDGATGVDRRQKLMDRFNNDERIFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYR
Sbjct:    1 MELWSLMHFLMPHLFRSRKEFSYWFSNPLNSMVQGARALSDGLIRRLHTIMRPFLLRRLKKDVEKQLPGKFEHVVLCPLSRRQAHLYEEFMARSSTRAALAGGNFMGMMNVLMQLRKVCNHPDLFEARPIRSPYAMDPLALPVPALALDLLSPSSPLARALLHALKLDQDRARDLGPLIERFTCVVPRVRSSFPILLSSSARPPSLPPALHPPLRHLRTRLLRPYHPAALRQSLLFPDKWLVQFDAGKLQTLARLLLSLKRGHHRVLIFTQMTKMLDVLEQFLNLNGHVYLRLDGATGVDRRQKLMDRFNNDERIFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYR 369          
BLAST of EWM21940.1 vs. NCBI_GenBank
Match: gi|950883976|ref|XP_014525145.1| (hypothetical protein JH06_4839 [Blastocystis sp. subtype 4] >gi|902859756|gb|KNB41702.1| hypothetical protein JH06_4839 [Blastocystis sp. subtype 4])

HSP 1 Score: 364.77 bits (935), Expect = 6.529e-116
Identity = 190/390 (48.72%), Postives = 252/390 (64.62%), Query Frame = 0
Query:    1 MELWSLMHFLMPHLFRSRKEFSYWFSNPLNSMVQGARALSDGLIRRLHTIMRPFLLRRLKKDVEKQLPGKFEHVVLCPLSRRQAHLYEEFMARSSTRAALAGGNFMGMMNVLMQLRKVCNHPDLFEARPIRSPYAMDPLALPVPALALDL--------------LSPSSPLARALL------HALKLDQDRARDLGPLIERFTCVVPRVRSSFPILLSSSARPPSLPPALHPPLRHLRTRLLRPYHPAALR-QSLLFPDKWLVQFDAGKLQTLARLLLSLKRGHHRVLIFTQMTKMLDVLEQFLNLNGHVYLRLDGATGVDRRQKLMDRFNNDERIFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYR 369
            MELWSLMHFLMP LFRSR EF++WFSNP+N MV+G  +++  L+RRLH ++RPF+LRRLK +VEK++P K+ H+V CPLS+RQ  LYE++++R +T+  LA G+F+ MM VLMQLRKVCNHPDLFE RPI +P+  + L    P   L +              +  S+ L    L      HAL+   D  RD+    E     +    +     L+S  R    P     P   +R RL  P +      +   F  ++  + D       + +L  L+R  HR L+FTQM++MLD+ E FLN++   YLR+DG+T + +RQK+M++FNND ++F FILSTR+GGLGINL GADTVIFYDSDWNPAMDAQAQDRAHRIGQTR+VHIYR
Sbjct:  200 MELWSLMHFLMPALFRSRGEFAFWFSNPMNQMVEGESSVNAKLVRRLHEVLRPFILRRLKSEVEKEMPKKYFHIVSCPLSKRQRFLYEDYISRRNTKEQLASGSFLSMMGVLMQLRKVCNHPDLFETRPITTPFICEKLDPMYPRCVLKMKVRGRIQSHSFNQAIFQSNDLTDEALDELDWRHALRFFPDDCRDVSICEETLLWKMEEGNA-----LASVMRKEMKP----KPNEFVRERLFSPCNELLHEVEETEFNYRFGSEID-------SEMLPQLRREGHRCLLFTQMSRMLDIFETFLNMHHFSYLRMDGSTSLPQRQKMMEKFNNDNQVFIFILSTRAGGLGINLVGADTVIFYDSDWNPAMDAQAQDRAHRIGQTRDVHIYR 573          
BLAST of EWM21940.1 vs. NCBI_GenBank
Match: gi|1210520273|dbj|GAX20704.1| (hypothetical protein FisN_7Hh013 [Fistulifera solaris])

HSP 1 Score: 271.552 bits (693), Expect = 5.866e-78
Identity = 142/230 (61.74%), Postives = 163/230 (70.87%), Query Frame = 0
Query:  142 PVPALALDLLSPSSPLARALLHALKLDQDRARDLGPLIERFTCVVPRVRSSFPILLSSSARPPSLPPA--LHPPLRHLRTRLLRPYHPAALRQSLLFPDKWLVQFDAGKLQTLARLLLSLKRGHHRVLIFTQMTKMLDVLEQFLNLNGHVYLRLDGATGVDRRQKLMDRFNNDERIFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYR 369
            P+    LD +S  S     LL   +  Q+RA DL  LI +F   VP+       +L +S   P++ P       L H+  + L  +  A    +  FPDK LVQFD+GKLQTLA LL  LKRG HR LIFTQM+KMLD+LE FLNLNGH YLRLDGATGVDRRQ+LMDRFNND R+FCFILSTRSGG+GINLTGADTVIFYD+DWNPAMDAQA DRAHRIGQTREVHIYR
Sbjct: 1158 PMKIWQLDEMSSPS----QLLALRRTQQERADDLDILIRKFVFCVPKAGGQPARILCAS---PNVQPVKDAKEELAHVLEQNLSSFQRAHTALTSFFPDKKLVQFDSGKLQTLAELLRELKRGGHRALIFTQMSKMLDILEAFLNLNGHSYLRLDGATGVDRRQRLMDRFNNDPRVFCFILSTRSGGMGINLTGADTVIFYDNDWNPAMDAQATDRAHRIGQTREVHIYR 1380          

HSP 2 Score: 235.728 bits (600), Expect = 1.354e-65
Identity = 102/153 (66.67%), Postives = 130/153 (84.97%), Query Frame = 0
Query:    1 MELWSLMHFLMPHLFRSRKEFSYWFSNPLNSMVQGARALSDGLIRRLHTIMRPFLLRRLKKDVEKQLPGKFEHVVLCPLSRRQAHLYEEFMARSSTRAAL-AGGNFMGMMNVLMQLRKVCNHPDLFEARPIRSPYAMDPLALPVPALALDLLS 152
            MELWSL+HFLMPH+FRSRKEFS+WF+NP N++++G    +D ++ RLH I+RPF+LRRLKKDVE Q+PGKFEH++ C LSRRQ  +YEEFMARSSTR AL  GGN+MGMMNVLMQLRKVCNHPDLFE R + +P+ +DP+ + VPALA++ ++
Sbjct:  890 MELWSLLHFLMPHIFRSRKEFSFWFANPTNNLIEGKSNQNDDMMNRLHGIIRPFVLRRLKKDVETQMPGKFEHIIKCQLSRRQMFIYEEFMARSSTRQALKKGGNYMGMMNVLMQLRKVCNHPDLFEPRSVITPFVLDPILMEVPALAINAIA 1042          
BLAST of EWM21940.1 vs. NCBI_GenBank
Match: gi|1210529559|dbj|GAX11653.1| (E1A-binding protein p400 [Fistulifera solaris])

HSP 1 Score: 271.166 bits (692), Expect = 8.194e-78
Identity = 139/216 (64.35%), Postives = 156/216 (72.22%), Query Frame = 0
Query:  154 SSPLARALLHALKLDQDRARDLGPLIERFTCVVPRVRSSFPILLSSSARPPSLPPALHPPLRHLRTRLLRPYHPAALRQSLLFPDKWLVQFDAGKLQTLARLLLSLKRGHHRVLIFTQMTKMLDVLEQFLNLNGHVYLRLDGATGVDRRQKLMDRFNNDERIFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYR 369
            SSP    LL   +  Q+RA DL  LI +F   VP+     P  L  ++R           L H   + L P+  A    +  FPDK LVQFD+GKLQTLA LL  LKRG HR LIFTQM+KMLD+LE FLNLNGH YLRLDGATGVDRRQ+LMDRFNND ++FCFILSTRSGG+GINLTGADTVIFYD+DWNPAMDAQA DRAHRIGQTREVHIYR
Sbjct: 1176 SSP--SQLLSLRRTQQERADDLDILIRKFVFCVPKAGGQ-PAQLLCASRNVQPAKEAKEELAHALEQKLSPFQRAHTGLTSFFPDKKLVQFDSGKLQTLAELLRELKRGGHRALIFTQMSKMLDILEAFLNLNGHSYLRLDGATGVDRRQRLMDRFNNDPKVFCFILSTRSGGMGINLTGADTVIFYDNDWNPAMDAQATDRAHRIGQTREVHIYR 1388          

HSP 2 Score: 233.417 bits (594), Expect = 8.860e-65
Identity = 101/153 (66.01%), Postives = 128/153 (83.66%), Query Frame = 0
Query:    1 MELWSLMHFLMPHLFRSRKEFSYWFSNPLNSMVQGARALSDGLIRRLHTIMRPFLLRRLKKDVEKQLPGKFEHVVLCPLSRRQAHLYEEFMARSSTRAAL-AGGNFMGMMNVLMQLRKVCNHPDLFEARPIRSPYAMDPLALPVPALALDLLS 152
            MELWSL+HFLMPH+FRSRKEFS+WF+NP+N++++G    +D ++ RLH I+RPF+LRRLKKDVE Q+PGKFEH+V C LSRRQ  +YEEFMARSSTR AL  GGN+MGMMNVLMQLRKVCNHPDLFE R + +P+ + P+ +  PALA + ++
Sbjct:  898 MELWSLLHFLMPHIFRSRKEFSFWFANPMNNLIEGKSNQNDDMMNRLHGIIRPFVLRRLKKDVETQMPGKFEHIVKCQLSRRQMFIYEEFMARSSTRQALKKGGNYMGMMNVLMQLRKVCNHPDLFEPRSVITPFVLAPILMEAPALAFNAIT 1050          
BLAST of EWM21940.1 vs. NCBI_GenBank
Match: gi|1027185010|gb|OAG28934.1| (DNA helicase INO8 [Nematocida displodere])

HSP 1 Score: 255.373 bits (651), Expect = 4.697e-74
Identity = 154/399 (38.60%), Postives = 216/399 (54.14%), Query Frame = 0
Query:    2 ELWSLMHFLMPHLFRSRKEFSYWFSNPLNSMVQGARALSDGLIRRLHTIMRPFLLRRLKKDVEKQLPGKFEHVVLCPLSRRQAHLYEEFMARSSTRAALAGG------NFMGMMNVLMQLRKVCNHPDLFEARPIRSPYAMDPLALPVPALALDL------------------------LSPSSPLARALLHALKLDQDRARDLGPLIERFTCVVPRVRSSFPILLSSSARPPSLPPALHPPLRHLRTRLLRPYHPAALRQSLLF-PDKWLVQFDAGKLQTLARLLLSLKRGHHRVLIFTQMTKMLDVLEQFLNLNGHVYLRLDGATGVDRRQKLMDRFNNDERIFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYR 369
            ELW+L+HF+MP LF S  EFS WF       ++   ++++    RL  +++PF+LRR KKDV  +L  K E  V+C LS +Q  LYE    R+   + L            G+MN++MQ RKVCNHPDLFE R + + ++  P  + VP    +L                        LSPSS  A+ L     LD+   R L  +I      VP+      + +S    P  +P     P+  L         P+A+ Q  ++ P       D+GKL  L  LL  LK   HRVL++ QMTKM+D+ E++L +  + YLRLDG++ +  R+ L+  + ++   F F+LSTR+GGLGINLT ADTVIFYDSDWNP  D QA DRAHR+GQT++V +YR
Sbjct:  468 ELWALLHFIMPTLFDSHGEFSEWFK------IEDGDSITEAA--RLRMVLQPFMLRREKKDVADELGQKIEKTVICELSPKQKRLYEGIRMRAPMASFLDNTLPEDIEGIEGLMNIVMQFRKVCNHPDLFEKREVSAGWSQPPSEVYVPRALSNLAFFKRSAVTDKFLISRDTELPWIDLSPSSNPAKRLKVCSGLDESLIRCLEAVI------VPKCLPPKQVTVS----PAVVPEPKISPMVSL---------PSAMPQVQIYVPSMERFVSDSGKLAVLDTLLPKLKEEGHRVLMYFQMTKMIDLFEEYLTVRNYSYLRLDGSSKISNRKDLVKDWQSNTDRFIFLLSTRAGGLGINLTAADTVIFYDSDWNPTADQQAMDRAHRLGQTKQVTVYR 839          
BLAST of EWM21940.1 vs. NCBI_GenBank
Match: gi|695385227|ref|XP_009518219.1| (hypothetical protein PHYSODRAFT_483737 [Phytophthora sojae] >gi|348683116|gb|EGZ22931.1| hypothetical protein PHYSODRAFT_483737 [Phytophthora sojae])

HSP 1 Score: 256.914 bits (655), Expect = 7.248e-73
Identity = 133/225 (59.11%), Postives = 156/225 (69.33%), Query Frame = 0
Query:  159 RALLHALKLDQDRARDLGPLIERFTCVVPRVRS--------------SFPILLSSSARPPSLPPALHPPLRHLRTRLLRPYHPAALRQSLLFPDKWLVQFDAGKLQTLARLLLSLKRGHHRVLIFTQMTKMLDVLEQFLNLNGHVYLRLDGATGVDRRQKLMDRFNNDERIFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYR 369
            +AL   ++  ++R   L P + +  C VP+ R+                  +LS   +   L  A H   R + TR+L PYH +  R  L FPDK LVQFD GKLQ LA LL +LKRG HR LIFTQM+ ML++LE FLNL+GH Y RLDGAT VD+RQ LM+RFN DE+IFCFILSTRSGGLGINLTGAD VIFYDSDWNPAMDAQAQDRAHRIGQTR+VHIYR
Sbjct: 1005 KALQDMVRDPEERLASLQPAVNKSVCYVPKARARPARVIYGGGGFVYDDNFVLSRRKQAEELE-ANH--ARPVATRILAPYHNSFKRTQLFFPDKALVQFDCGKLQQLAALLRTLKRGGHRCLIFTQMSSMLNILEVFLNLHGHTYFRLDGATKVDKRQMLMERFNRDEKIFCFILSTRSGGLGINLTGADAVIFYDSDWNPAMDAQAQDRAHRIGQTRDVHIYR 1226          

HSP 2 Score: 199.904 bits (507), Expect = 3.529e-53
Identity = 100/161 (62.11%), Postives = 117/161 (72.67%), Query Frame = 0
Query:    1 MELWSLMHFLMPHLFRSRKEFSYWFSNPLNSMV--------QGARALSDG--LIRRLHTIMRPFLLRRLKKDVEKQLPGKFEHVVLCPLSRRQAHLYEEFMARSSTRAAL------AGGNFMGMMNVLMQLRKVCNHPDLFEARPIRSPYAMDPLALPVPA 145
            +ELW+LMHFLMPH+F SRKEFSYWF NPL  MV        QG   +  G  L+ +LH I+RPF+LRRLKKDV KQLPGKFEHV+ C LS+RQ  LYE+F++RSSTR A+       G NFM MMNVLMQLRKVCNHPDLFE RPI SP  M  + + VP+
Sbjct:  700 LELWALMHFLMPHVFASRKEFSYWFQNPLALMVENGTDPAQQGDNGVEGGKDLVTQLHGIIRPFVLRRLKKDVAKQLPGKFEHVISCQLSKRQRFLYEDFISRSSTRRAMFGRGKGRGANFMSMMNVLMQLRKVCNHPDLFEPRPIASPLDMPSIHVHVPS 860          
BLAST of EWM21940.1 vs. NCBI_GenBank
Match: gi|939653096|ref|XP_014296585.1| (PREDICTED: helicase domino [Microplitis demolitor] >gi|939653100|ref|XP_014296586.1| PREDICTED: helicase domino [Microplitis demolitor])

HSP 1 Score: 255.758 bits (652), Expect = 1.670e-72
Identity = 128/214 (59.81%), Postives = 149/214 (69.63%), Query Frame = 0
Query:  160 ALLHALKLDQDRARDLGPLIERFTCVVPRVRSSFPILLSSSARPPSLPPALHPPLRHLRTRLLRP----YHPAALRQSLLFPDKWLVQFDAGKLQTLARLLLSLKRGHHRVLIFTQMTKMLDVLEQFLNLNGHVYLRLDGATGVDRRQKLMDRFNNDERIFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYR 369
            AL  A+K  +    +L  + ERF C VP VR+  P    S   PP      H  ++ +  R + P     HP        FPD  L+Q+D GKLQ+L RLL  LK G HRVLIFTQMT+MLDVLE FLN +GH+YLRLDG T VD+RQ LM+RFN D+RIFCFILSTRSGG+G+NLTGADTVIFYDSDWNP MDAQAQDR HRIGQTR+VHIYR
Sbjct: 1565 ALAQAIKSTEQIVEELKEVFERFVCYVPAVRAPVPRFHVS--HPPPCKLWQHQRMQMVLQRRITPKCAILHPINSAMMTQFPDPRLIQYDCGKLQSLDRLLRKLKSGSHRVLIFTQMTRMLDVLEAFLNYHGHIYLRLDGTTKVDQRQFLMERFNGDKRIFCFILSTRSGGVGVNLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 1776          

HSP 2 Score: 203.371 bits (516), Expect = 2.375e-54
Identity = 106/229 (46.29%), Postives = 146/229 (63.76%), Query Frame = 0
Query:    1 MELWSLMHFLMPHLFRSRKEFSYWFSNPLNSMVQGARALSDGLIRRLHTIMRPFLLRRLKKDVEKQLPGKFEHVVLCPLSRRQAHLYEEFMARSSTRAALAGGNFMGMMNVLMQLRKVCNHPDLFEARPIRSPYAMDPLALPVPAL---ALDLLSPSSPLARAL--LHALKLDQD-------RARDLG---PLIERFTCV------VPRVRSSFPILLSSSARPPSLPP 208
            MELWSLMHFLMP++F+S +EF  WFSNP+  M++G    ++ +IRRLH ++RPFLLRRLK +VEKQLP K+EHV++C LS+RQ  LY++FM+R+ TR  LA GN + ++NVLMQLRKVCNHP+LFE RP  SP+ M+ +     +L   ALD   P   +  A+  L+ LK+++        R R L     LIE            P  +    + LS+  +PPS+ P
Sbjct:  996 MELWSLMHFLMPNVFQSHREFKEWFSNPVTGMIEGNSEYNENIIRRLHKVLRPFLLRRLKTEVEKQLPKKYEHVIMCRLSKRQRFLYDDFMSRAKTRETLASGNLLSVINVLMQLRKVCNHPNLFEVRPTVSPFQMEAIDFITASLVWSALD-YDPFKHIDLAILNLNLLKIERTITAFVSHRIRRLQTPRKLIEEIDSQPPPPPRCPAGKIKITVRLSNQVKPPSVTP 1223          
BLAST of EWM21940.1 vs. NCBI_GenBank
Match: gi|298709602|emb|CBJ49249.1| (similar to E1a binding protein P400 (Partial), partial [Ectocarpus siliculosus])

HSP 1 Score: 254.218 bits (648), Expect = 6.487e-72
Identity = 127/213 (59.62%), Postives = 160/213 (75.12%), Query Frame = 0
Query:  160 ALLHALKLDQDRARDLGPLIERFTCVVPRVRSSFPILLSSSARPPSLPPALHPPLRHLRTRL---LRPYHPAALRQSLLFPDKWLVQFDAGKLQTLARLLLSLKRGHHRVLIFTQMTKMLDVLEQFLNLNGHVYLRLDGATGVDRRQKLMDRFNNDERIFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYR 369
            A++ ++K  ++R  ++  L+ERF  +VP+V +  P ++ +     SL  A               L   +PA +RQ + FPD+ LVQ+DAGKLQ LA LL S K+G H+ LIFTQM++MLDVLE+FL L+GH Y+RLDG+TGV++RQ+LMDRFN D ++FCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYR
Sbjct: 1603 AMMGSVKGLRERCEEMHTLVERFCFLVPKVMAWAPNVVGTPDLASSLAFATGRERLRREVVRRGGLSLIYPAQIRQRICFPDRRLVQYDAGKLQVLAGLLRSRKQGGHKCLIFTQMSRMLDVLEEFLTLHGHTYVRLDGSTGVEKRQRLMDRFNLDPKLFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYR 1815          

HSP 2 Score: 249.21 bits (635), Expect = 3.598e-70
Identity = 116/143 (81.12%), Postives = 128/143 (89.51%), Query Frame = 0
Query:    1 MELWSLMHFLMPHLFRSRKEFSYWFSNPLNSMVQGARALSDGLIRRLHTIMRPFLLRRLKKDVEKQLPGKFEHVVLCPLSRRQAHLYEEFMARSSTRAALAGGNFMGMMNVLMQLRKVCNHPDLFEARPIRSPYAMDPLALPV 143
            MELWSLMHFLMPH+FRSRKEFSYWFS PL+ MV+G+R  +D LIRRLH+++RPFLLRRLKKDVEKQLPGK EHVV+C LSRRQA LYEEFMARSSTRAAL GGNFMGMMN+LMQLRKVCNHPDLFEAR I SP+ + PL L V
Sbjct: 1230 MELWSLMHFLMPHVFRSRKEFSYWFSQPLSHMVEGSRERNDDLIRRLHSVVRPFLLRRLKKDVEKQLPGKHEHVVMCRLSRRQASLYEEFMARSSTRAALQGGNFMGMMNILMQLRKVCNHPDLFEARQIDSPFVLPPLDLGV 1372          
BLAST of EWM21940.1 vs. NCBI_GenBank
Match: gi|1025689538|gb|OAA76824.1| (helicase SWR1 [Cordyceps confragosa RCEF 1005])

HSP 1 Score: 253.447 bits (646), Expect = 9.056e-72
Identity = 129/208 (62.02%), Postives = 151/208 (72.60%), Query Frame = 0
Query:  170 DRARDLGPLIERFTCVVPRV--RSSFPILLS--SSARPPSLPPALHPPLRHL----RTRLLRPYHPAALRQSLLFPDKWLVQFDAGKLQTLARLLLSLKRGHHRVLIFTQMTKMLDVLEQFLNLNGHVYLRLDGATGVDRRQKLMDRFNNDERIFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYR 369
            DRA +  PLIE+FTCV P V  R    +LL   ++AR       L  P+R      +     P+H A +R ++ FPDK L+Q+D GKLQ L +LL  L+ G HR LIFTQMTK+LD+LEQFLN++GH YLRLDGAT V++RQ L DRFNND RI CFILSTRSGGLGINLTGADTVIFYD DWNPAMD Q QDR HRIGQTR+VHIYR
Sbjct: 1296 DRADEYKPLIEKFTCVTPAVVTRDLNQVLLGRQTAARFTDEDLKLSAPVRWAPFLPKEAPTDPWHEARMRHTIQFPDKRLLQYDCGKLQALDKLLRKLQSGGHRALIFTQMTKVLDILEQFLNIHGHKYLRLDGATKVEQRQILTDRFNNDPRILCFILSTRSGGLGINLTGADTVIFYDQDWNPAMDKQCQDRCHRIGQTRDVHIYR 1503          

HSP 2 Score: 149.443 bits (376), Expect = 8.330e-36
Identity = 70/143 (48.95%), Postives = 95/143 (66.43%), Query Frame = 0
Query:    1 MELWSLMHFLMPHL-----FRSRKEFSYWFSNPLNSMVQGARALSD----GLIRRLHTIMRPFLLRRLKKDVEKQLPGKFEHVVLCPLSRRQAHLYEEFMARSSTRAALAGGNFMGMMNVLMQLRKVCNHPDLFEARPIRSPY 134
             ELWSL+ FLMP       F   +EF  WF  P + +++  R   D     +I +LH ++RP+LLRRLK DVEKQ+P K+EHV  C LS+RQ  LY+ F++RS T+  L+ GN++ ++N LMQLRKVCNHPDLF  RPI + +
Sbjct:  986 TELWSLLFFLMPAQNGEGGFADLQEFHEWFHKPESQILESGREQMDEEAKAIISKLHKVLRPYLLRRLKADVEKQMPAKYEHVEFCRLSKRQRELYDGFLSRSETKETLSSGNYLSIINCLMQLRKVCNHPDLFIDRPIMTSF 1128          
BLAST of EWM21940.1 vs. NCBI_GenBank
Match: gi|475663121|gb|EMT60917.1| (Helicase SWR1 [Fusarium oxysporum f. sp. cubense race 4])

HSP 1 Score: 241.121 bits (614), Expect = 1.296e-71
Identity = 131/256 (51.17%), Postives = 156/256 (60.94%), Query Frame = 0
Query:  131 RSPYAMDPLALPVPALALDLLSPSSPLARALLHALKLDQDRARDLGPLIERFTCVVPRVRS-----------------SFPILLSSSARPPSLPPALHPPLRHLRTRLLRPYHPAALRQSLLFPDKWLVQFDAGKLQTLARLLLSLKRGHHRVLIFTQMTKMLDVLEQFLNLNGHVYLRLDGATGVDRRQKLMDRFNNDERIFCFILSTRSGGLGINLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYR 369
            + PY   P    VP L +      S L ++++  +     RA      IE+F+CV P V +                    + LS   R     P   PP          P+H   +R S+ FPDK L+Q+D GKLQ L +LL  L+ G HR LIFTQMTK+LD+LEQFLN++GH YLRLDGAT V++RQ L DRFNND RI CFILSTRSGGLGINLTGADTVIFYD DWNPAMD Q QDR HRIGQTR+VHIYR
Sbjct:   73 KRPYKPRP---KVPRLVMSWFEEESRLIQSMIPTV---NQRADSFKTTIEKFSCVTPAVVTRDMDQFVLGRKGIEAFTDEDLKLSKPVRWAPFLPKEAPP---------DPWHEGRMRLSIQFPDKRLLQYDCGKLQVLDKLLRKLQTGGHRALIFTQMTKVLDILEQFLNIHGHKYLRLDGATKVEQRQILTDRFNNDPRILCFILSTRSGGLGINLTGADTVIFYDQDWNPAMDKQCQDRCHRIGQTRDVHIYR 313          
The following BLAST results are available for this feature:
BLAST of EWM21940.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102289|gb|EWM21940.1|0.000e+0100.00e1a binding protein p400 [Nannochloropsis gaditana... [more]
gi|950883976|ref|XP_014525145.1|6.529e-11648.72hypothetical protein JH06_4839 [Blastocystis sp. s... [more]
gi|1210520273|dbj|GAX20704.1|5.866e-7861.74hypothetical protein FisN_7Hh013 [Fistulifera sola... [more]
gi|1210529559|dbj|GAX11653.1|8.194e-7864.35E1A-binding protein p400 [Fistulifera solaris][more]
gi|1027185010|gb|OAG28934.1|4.697e-7438.60DNA helicase INO8 [Nematocida displodere][more]
gi|695385227|ref|XP_009518219.1|7.248e-7359.11hypothetical protein PHYSODRAFT_483737 [Phytophtho... [more]
gi|939653096|ref|XP_014296585.1|1.670e-7259.81PREDICTED: helicase domino [Microplitis demolitor]... [more]
gi|298709602|emb|CBJ49249.1|6.487e-7259.62similar to E1a binding protein P400 (Partial), par... [more]
gi|1025689538|gb|OAA76824.1|9.056e-7262.02helicase SWR1 [Cordyceps confragosa RCEF 1005][more]
gi|475663121|gb|EMT60917.1|1.296e-7151.17Helicase SWR1 [Fusarium oxysporum f. sp. cubense r... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8763rna8763Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications