EWM21954.1, cds8727 (CDS) Nannochloropsis gaditana

Overview
NameEWM21954.1
Unique Namecds8727
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:88419..89705 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21954.1
Productphosphoribulokinase
Orig transcript idgnl|cribi|Naga_100157g10.57.mrna
GenePRK
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:88419..89705 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0009579thylakoid
GO:0009507chloroplast
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0015979photosynthesis
GO:0008152metabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0000166nucleotide binding
GO:0016301kinase activity
GO:0005524ATP binding
GO:0008974phosphoribulokinase activity
Vocabulary: INTERPRO
TermDefinition
IPR006083PRK/URK
IPR027417P-loop_NTPase
IPR006082PRK
Homology
BLAST of EWM21954.1 vs. NCBI_GenBank
Match: gi|585102306|gb|EWM21954.1| (phosphoribulokinase [Nannochloropsis gaditana])

HSP 1 Score: 882.478 bits (2279), Expect = 0.000e+0
Identity = 428/428 (100.00%), Postives = 428/428 (100.00%), Query Frame = 0
Query:    1 MVKTAAVSLLALAGLASAFVPPTTNFRSANRWTIKAKDTSFTRNLMMKLGADDKVILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHANDRSGRKVTGRTALEAAEQNFDLMYEQLKALKEGKTVAKPIYNHVNGTLDRPEEVVPTPIVIVEGLHPWYDARVKDLLDYTIYLDISDEIKRAWKIQRDMAERGWTLEQVEAEIEKRKPDFNKFVGPQKEVADSVIQVLPTELTNDPEGKILRVRLIQKETGDYEPVYLFDQGSTVSWIPCGTKLTCSYPGIKLGSGPDRWFNNAVNVVEMDGQFDKLEELAYVEKHLGNTASKYDGEITAQMLKNEGPRDPERLRPLPDHRLAQDPRGLREAEREEGRRLRQGPRGRVSRRQRSEGWLAAENRVGFEVWRS 428
            MVKTAAVSLLALAGLASAFVPPTTNFRSANRWTIKAKDTSFTRNLMMKLGADDKVILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHANDRSGRKVTGRTALEAAEQNFDLMYEQLKALKEGKTVAKPIYNHVNGTLDRPEEVVPTPIVIVEGLHPWYDARVKDLLDYTIYLDISDEIKRAWKIQRDMAERGWTLEQVEAEIEKRKPDFNKFVGPQKEVADSVIQVLPTELTNDPEGKILRVRLIQKETGDYEPVYLFDQGSTVSWIPCGTKLTCSYPGIKLGSGPDRWFNNAVNVVEMDGQFDKLEELAYVEKHLGNTASKYDGEITAQMLKNEGPRDPERLRPLPDHRLAQDPRGLREAEREEGRRLRQGPRGRVSRRQRSEGWLAAENRVGFEVWRS
Sbjct:    1 MVKTAAVSLLALAGLASAFVPPTTNFRSANRWTIKAKDTSFTRNLMMKLGADDKVILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHANDRSGRKVTGRTALEAAEQNFDLMYEQLKALKEGKTVAKPIYNHVNGTLDRPEEVVPTPIVIVEGLHPWYDARVKDLLDYTIYLDISDEIKRAWKIQRDMAERGWTLEQVEAEIEKRKPDFNKFVGPQKEVADSVIQVLPTELTNDPEGKILRVRLIQKETGDYEPVYLFDQGSTVSWIPCGTKLTCSYPGIKLGSGPDRWFNNAVNVVEMDGQFDKLEELAYVEKHLGNTASKYDGEITAQMLKNEGPRDPERLRPLPDHRLAQDPRGLREAEREEGRRLRQGPRGRVSRRQRSEGWLAAENRVGFEVWRS 428          
BLAST of EWM21954.1 vs. NCBI_GenBank
Match: gi|299469835|emb|CBN76689.1| (Phosphoribulokinase [Ectocarpus siliculosus])

HSP 1 Score: 490.345 bits (1261), Expect = 4.310e-169
Identity = 232/348 (66.67%), Postives = 277/348 (79.60%), Query Frame = 0
Query:   24 TNFRSANRWTIKAKDTSFTRN-------LMMKLGADDKVILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHANDRSGRKVTGRTALEAAEQNFDLMYEQLKALKEGKTVAKPIYNHVNGTLDRPEEVVPTPIVIVEGLHPWYDARVKDLLDYTIYLDISDEIKRAWKIQRDMAERGWTLEQVEAEIEKRKPDFNKFVGPQKEVADSVIQVLPTELT-NDPEGKILRVRLIQKETGD-YEPVYLFDQGSTVSWIPCGTKLTCSYPGIKLGSGPDRWFNNAVNVVEMDGQFDKLEELAYVEKHLGNTASKYDGEITAQMLKN 362
            T + S+   + KA+  + +R+       L MKLG D+KV+LIGVAADSGCGKSTFMRRLT+IFGG  VGPLGGGFDNGGWETN+LVSD TTV+CLDDYH NDR GRKV+GRTAL   EQ FDLMYEQL  LK GK+V KPIYNHVNGTLD PEE+ PTPIVI+EGLHP+ D RV+DLLD+TIYLDISDEIK AWKIQRDM ERG +LE ++A IE RKPDF+ F+ PQ+  AD VIQVLPT+L   D EGKILR R++QKE  D ++P +LFD+GST+SW+PCG KLTCS+PGIK   GPD +++N V+V+EMDGQFD L+EL YVE HL N  +K+ GE+T  +LK 
Sbjct:   45 TRWASSTPTSTKARPGTMSRSARARLEALSMKLGEDEKVVLIGVAADSGCGKSTFMRRLTSIFGGDTVGPLGGGFDNGGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDTPEEIKPTPIVIIEGLHPFVDKRVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIEARKPDFDAFIAPQRSEADVVIQVLPTQLIPGDTEGKILRTRMVQKEGLDFFDPAFLFDEGSTISWVPCGRKLTCSFPGIKFAYGPDTYYDNEVSVIEMDGQFDNLQELIYVESHLSNIGTKFYGELTQNILKQ 392          
BLAST of EWM21954.1 vs. NCBI_GenBank
Match: gi|13398515|gb|AAK21910.1|AF336986_1 (phosphoribulokinase [Vaucheria litorea] >gi|89077677|gb|ABD60353.1| chloroplast phosphoribulokinase precursor [Vaucheria litorea] >gi|375332043|gb|AFA52561.1| phosphoribulokinase [Vaucheria litorea])

HSP 1 Score: 455.292 bits (1170), Expect = 8.510e-156
Identity = 234/342 (68.42%), Postives = 273/342 (79.82%), Query Frame = 0
Query:   23 TTNFRSANRWTIKAKDTSFTRNLMMKLG-ADDKVILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHANDRSGRKVTGRTALEAAEQNFDLMYEQLKALKEGKTVAKPIYNHVNGTLDRPEEVVPTPIVIVEGLHPWYDARVKDLLDYTIYLDISDEIKRAWKIQRDMAERGWTLEQVEAEIEKRKPDFNKFVGPQKEVADSVIQVLPTELT-NDPEGKILRVRLIQKE-TGDYEPVYLFDQGSTVSWIPCGTKLTCSYPGIKLGSGPDRWFNNAVNVVEMDGQFDKLEELAYVEKHLGNTASKYDGEITAQMLK 361
            T N +S N+   K +       L MKLG  D+ V++IGVAADSGCGKSTFMRRLTNIFGGS+VGPLGGGF NGGWETNTLVSD TTVICLDDYH NDR+GRKV+GRTAL   EQ FDLM EQL ALK G++V KPIYNHVNGTLD PEEV PTPIVI+EGLHP+ D RV+DLLD+TIYLDISDEIK AWKIQRDM ERG +LE ++A IE RKPDF+ ++ PQ+  AD V+QVLPT+L   D EGKILR RLIQKE   ++E  YLFD+GST++WIPCG KLTCS+PGIK   GPD +F+N V+V+EMDGQFD L+EL YVE  L NT +K+ GE+T  +LK
Sbjct:   33 TNNAQSLNKAASKLQ------ALEMKLGDPDEPVVIIGVAADSGCGKSTFMRRLTNIFGGSSVGPLGGGFGNGGWETNTLVSDLTTVICLDDYHLNDRNGRKVSGRTALHTDEQKFDLMTEQLSALKRGESVMKPIYNHVNGTLDTPEEVKPTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIEARKPDFDAYIAPQRAQADVVLQVLPTKLVPEDKEGKILRTRLIQKENVKNFETAYLFDEGSTINWIPCGRKLTCSFPGIKFAYGPDTYFDNEVSVLEMDGQFDNLQELIYVEGFLSNTGTKFYGELTQNILK 368          
BLAST of EWM21954.1 vs. NCBI_GenBank
Match: gi|146739106|gb|ABQ42600.1| (chloroplast phosphoribulokinase precursor [Heterosigma akashiwo])

HSP 1 Score: 448.358 bits (1152), Expect = 2.836e-153
Identity = 232/344 (67.44%), Postives = 264/344 (76.74%), Query Frame = 0
Query:   20 VPPTTNFRSANRWTIKAKDTSFTRNLMMKLGADDKVILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHANDRSGRKVTGRTALEAAEQNFDLMYEQLKALKEGKTVAKPIYNHVNGTLDRPEEVVPTPIVIVEGLHPWYDARVKDLLDYTIYLDISDEIKRAWKIQRDMAERGWTLEQVEAEIEKRKPDFNKFVGPQKEVADSVIQVLPTELTNDP-EGKILRVRLIQKETG-DYEPVYLFDQGSTVSWIPCGTKLTCSYPGIKLGSGPDRWFNNAVNVVEMDGQFDKLEELAYVEKHLGNTASKYDGEITAQMLK 361
            V  TT+F  A     + K  S +  L M L   ++V+LIGVAADSGCGKSTFMRRLT +FG   V  LGGGF NGGWETNTLVS +TTVICLDDYH NDR+GRKV+G TAL   E NFDLMYEQLK LK GKT+ KPIYNHVNGTLD PEEV PTPIVIVEGLHP  D RV +LLD+ IYLDISDEIK AWKIQRDM ERG +LE ++A IE RKPDF  FV PQ+  +D VIQVLPTEL  D  +GKILRVR+IQKE   +++P YLFD+GST+SW PCG KLTCSYPGIK   GPD +F+N V+V+EMDG+FD LEEL YVE HL  T SK+ GE+  QMLK
Sbjct:   16 VAFTTSFNGA-----QLKSASSSSALQMALKEGEEVVLIGVAADSGCGKSTFMRRLTGMFGTDGVQMLGGGFGNGGWETNTLVSPSTTVICLDDYHLNDRNGRKVSGLTALHEKENNFDLMYEQLKELKSGKTIKKPIYNHVNGTLDTPEEVEPTPIVIVEGLHPMLDDRVAELLDFRIYLDISDEIKFAWKIQRDMEERGHSLESIKASIEARKPDFEAFVSPQRAKSDIVIQVLPTELIPDSTDGKILRVRMIQKEGNPNFKPAYLFDEGSTISWTPCGRKLTCSYPGIKFSYGPDTFFDNEVSVIEMDGEFDNLEELVYVESHLSQTGSKFYGELAQQMLK 354          
BLAST of EWM21954.1 vs. NCBI_GenBank
Match: gi|349585018|dbj|BAL03266.1| (chloroplast phosphoribulokinase [Closterium peracerosum-strigosum-littorale complex])

HSP 1 Score: 439.113 bits (1128), Expect = 2.871e-149
Identity = 214/352 (60.80%), Postives = 268/352 (76.14%), Query Frame = 0
Query:   13 AGLASAFVPPTTNFRSANRWTIKAKDTSFTRNLMMKLGADDKVILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHANDRSGRKVTGRTALEAAEQNFDLMYEQLKALKEGKTVAKPIYNHVNGTLDRPEEVVPTPIVIVEGLHPWYDARVKDLLDYTIYLDISDEIKRAWKIQRDMAERGWTLEQVEAEIEKRKPDFNKFVGPQKEVADSVIQVLPTELT-NDPEGKILRVRLIQKETGD-YEPVYLFDQGSTVSWIPCGTKLTCSYPGIKLGSGPDRWFNNAVNVVEMDGQFDKLEELAYVEKHLGNTASKYDGEITAQMLKN 362
            A L+S F       ++++R     K T     L++   A +K +++G+AADSGCGKSTFMRR+T +FGGS   P GG  D     +NTL+SD TTVICLDDYH+ DR+GRK    TAL+    NFDLMYEQ+KALKEGK+V KPIYNHV+G LD PE +    I+++EGLHP YD RV+DL+D++IYLDISDE+K AWKIQRDMAERG +LE ++A I+ RKPDF+ ++ PQK+ AD VIQVLPT+L  +D EGKILRVR+IQKE  D ++PVYLFD+GS++SWIPCG KLTCSYPGIK   GPD +F N V+V+EMDGQFDKLEEL YVE HL NT++K+ GE+T QMLKN
Sbjct:   39 ASLSSTFSGKQIAAKASSRSHAAGKRTV----LVVCKAAGEKTVVVGLAADSGCGKSTFMRRMTGVFGGSAAPPKGGNPD-----SNTLLSDMTTVICLDDYHSLDRNGRKEANVTALDPKANNFDLMYEQVKALKEGKSVMKPIYNHVSGLLDPPELIESPKILVIEGLHPMYDERVRDLIDFSIYLDISDEVKFAWKIQRDMAERGHSLESIKASIQARKPDFDAYIDPQKQHADVVIQVLPTQLIPDDNEGKILRVRMIQKEGLDNFDPVYLFDEGSSISWIPCGRKLTCSYPGIKFYYGPDTYFGNEVSVLEMDGQFDKLEELIYVESHLSNTSTKFYGEVTQQMLKN 381          
BLAST of EWM21954.1 vs. NCBI_GenBank
Match: gi|527194042|gb|EPS63825.1| (phosphoribulokinase, partial [Genlisea aurea])

HSP 1 Score: 437.187 bits (1123), Expect = 4.321e-149
Identity = 206/322 (63.98%), Postives = 259/322 (80.43%), Query Frame = 0
Query:   43 RNLMMKLGADDKVILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHANDRSGRKVTGRTALEAAEQNFDLMYEQLKALKEGKTVAKPIYNHVNGTLDRPEEVVPTPIVIVEGLHPWYDARVKDLLDYTIYLDISDEIKRAWKIQRDMAERGWTLEQVEAEIEKRKPDFNKFVGPQKEVADSVIQVLPTELT-NDPEGKILRVRLIQKETGDY-EPVYLFDQGSTVSWIPCGTKLTCSYPGIKLGSGPDRWFNNAVNVVEMDGQFDKLEELAYVEKHLGNTASKYDGEITAQMLKN 362
            R ++    A+DK ++IG+AADSGCGKSTFMRRLT++FGG+   P GG  D     +NTLVSDTTTVICLDDYH+ DR+GRK  G TAL+    NFDLMYEQ+KALK+G  V KPIYNHV+G LD PE + P  I+++EGLHP +D+RV+DLLD++IYLDIS+E+K AWKIQRDMAERG +LE ++A IE RKPDF+ ++ PQK+ AD+VI+VLPT+L  +D EG++LRVRLI KE   Y  PVYLFD+GST+SWIPCG KLTCSYPGIK G GPD +F+N V+V+EMDGQFD+L+EL YVE HL N ++K+ GE+T QMLK+
Sbjct:   21 RRIITSCSAEDKTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPRGGNPD-----SNTLVSDTTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKALKDGVAVDKPIYNHVSGLLDPPELIKPPKILVIEGLHPMFDSRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLPTQLIPDDNEGRVLRVRLIMKEGVKYFSPVYLFDEGSTISWIPCGRKLTCSYPGIKFGYGPDTYFDNEVSVLEMDGQFDRLDELIYVESHLSNISTKFYGEVTQQMLKH 337          
BLAST of EWM21954.1 vs. NCBI_GenBank
Match: gi|159471788|ref|XP_001694038.1| (phosphoribulokinase [Chlamydomonas reinhardtii] >gi|125577|sp|P19824.1|KPPR_CHLRE RecName: Full=Phosphoribulokinase, chloroplastic; Short=PRK; Short=PRKase; AltName: Full=Phosphopentokinase; Flags: Precursor >gi|7107404|gb|AAF36402.1|AF228914_1 phosphoribulokinase precursor [Chlamydomonas reinhardtii] >gi|167432|gb|AAA33090.1| phosphoribulokinase [Chlamydomonas reinhardtii] >gi|158277205|gb|EDP02974.1| phosphoribulokinase [Chlamydomonas reinhardtii] >gi|227431|prf||1703465A phosphoribulokinase)

HSP 1 Score: 434.106 bits (1115), Expect = 7.032e-148
Identity = 210/338 (62.13%), Postives = 261/338 (77.22%), Query Frame = 0
Query:   29 ANRWTIKAKDTSFTRNLMMKLGAD-DKVILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHANDRSGRKVTGRTALEAAEQNFDLMYEQLKALKEGKTVAKPIYNHVNGTLDRPEEVVPTPIVIVEGLHPWYDARVKDLLDYTIYLDISDEIKRAWKIQRDMAERGWTLEQVEAEIEKRKPDFNKFVGPQKEVADSVIQVLPTELTNDPEGKILRVRLIQKETGD-YEPVYLFDQGSTVSWIPCGTKLTCSYPGIKLGSGPDRWFNNAVNVVEMDGQFDKLEELAYVEKHLGNTASKYDGEITAQMLKNEG 364
            A R T +++ T+      + + AD DK ++IG+AADSGCGKSTFMRR+T+IFGG    P GG  D     +NTL+SD TTVICLDDYH  DR+GRKV G TAL    QNFDLMY Q+KALKEGK+V KPIYNHV+G +D PE++   PI+++EGLHP+YD RV +LLD+ IYLDISD+IK AWKIQRDMAERG +LE +++ I  RKPDF+ ++ PQK+ AD +IQVLPT+L  D +G+ LRVRLI KE    ++PVYLFD+GST+SWIPCG KLTCS+PGIK+  GPD W+   V+V+EMDGQFDKLEEL YVE HL NT++K+ GEIT QMLKN G
Sbjct:    9 APRATAQSRVTANRARRSLVVRADKDKTVVIGLAADSGCGKSTFMRRMTSIFGGVPKPPAGGNPD-----SNTLISDMTTVICLDDYHCLDRNGRKVKGVTALAPEAQNFDLMYNQVKALKEGKSVDKPIYNHVSGLIDAPEKIESPPILVIEGLHPFYDKRVAELLDFKIYLDISDDIKFAWKIQRDMAERGHSLESIKSSIAARKPDFDAYIDPQKKDADMIIQVLPTQLVPDDKGQYLRVRLIMKEGSKMFDPVYLFDEGSTISWIPCGRKLTCSFPGIKMFYGPDTWYGQEVSVLEMDGQFDKLEELIYVESHLSNTSAKFYGEITQQMLKNSG 341          
BLAST of EWM21954.1 vs. NCBI_GenBank
Match: gi|1004141513|gb|KXZ49505.1| (hypothetical protein GPECTOR_21g731 [Gonium pectorale])

HSP 1 Score: 434.106 bits (1115), Expect = 7.280e-148
Identity = 208/323 (64.40%), Postives = 253/323 (78.33%), Query Frame = 0
Query:   43 RNLMMKLGADDKVILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHANDRSGRKVTGRTALEAAEQNFDLMYEQLKALKEGKTVAKPIYNHVNGTLDRPEEVVPTPIVIVEGLHPWYDARVKDLLDYTIYLDISDEIKRAWKIQRDMAERGWTLEQVEAEIEKRKPDFNKFVGPQKEVADSVIQVLPTELTNDPEGKILRVRLIQKETGD-YEPVYLFDQGSTVSWIPCGTKLTCSYPGIKLGSGPDRWFNNAVNVVEMDGQFDKLEELAYVEKHLGNTASKYDGEITAQMLKNEG 364
            R L++K    DK ++IG+AADSGCGKSTFMRR+T+IFGG    P GG  D     +NTL+SD TTVICLDDYH  DR+GRKV G TAL    QNFDLMY Q+KALKEGK+V KPIYNHV G +D PE++    I+++EGLHP+YD RV +LLD+ IYLDISD+IK AWKIQRDMAERG +LE +++ IE RKPDF+ ++ PQK  AD +IQVLPT+L  D +G+ LRVRLIQKE    ++PVYLFD+GST+SWIPCG KLTCS+PGIK+  GPD W+   V+V+EMDGQFDKLEEL YVE HL NT++K+ GEIT QMLKN G
Sbjct:   26 RALVVK-AQKDKTVVIGLAADSGCGKSTFMRRMTSIFGGVPKPPAGGNPD-----SNTLISDMTTVICLDDYHCLDRNGRKVKGVTALAPEAQNFDLMYNQVKALKEGKSVDKPIYNHVTGLIDAPEKIDSPNILVIEGLHPFYDKRVSELLDFKIYLDISDDIKFAWKIQRDMAERGHSLESIKSSIEARKPDFDAYIDPQKRDADMIIQVLPTQLVPDDKGQYLRVRLIQKEGSKMFDPVYLFDEGSTISWIPCGRKLTCSFPGIKMFYGPDTWYGQEVSVLEMDGQFDKLEELIYVESHLSNTSAKFYGEITQQMLKNSG 342          
BLAST of EWM21954.1 vs. NCBI_GenBank
Match: gi|502162280|ref|XP_004512451.1| (PREDICTED: phosphoribulokinase, chloroplastic [Cicer arietinum])

HSP 1 Score: 435.261 bits (1118), Expect = 7.474e-148
Identity = 209/330 (63.33%), Postives = 260/330 (78.79%), Query Frame = 0
Query:   35 KAKDTSFTRNLMMKLGADDKVILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHANDRSGRKVTGRTALEAAEQNFDLMYEQLKALKEGKTVAKPIYNHVNGTLDRPEEVVPTPIVIVEGLHPWYDARVKDLLDYTIYLDISDEIKRAWKIQRDMAERGWTLEQVEAEIEKRKPDFNKFVGPQKEVADSVIQVLPTELT-NDPEGKILRVRLIQKETGDY-EPVYLFDQGSTVSWIPCGTKLTCSYPGIKLGSGPDRWFNNAVNVVEMDGQFDKLEELAYVEKHLGNTASKYDGEITAQMLKN 362
            K++  +  R L+     D + I+IG+AADSGCGKSTFMRRLT++FGG+   P GG  D     +NTL+SDTTTVICLDDYH+ DR+GRK  G TAL+    +FDLMY+Q+KA+K+G +V KPIYNHV G LD PE + P  I+++EGLHP YD+RV+DLLD++IYLDIS+E+K AWKIQRDMAERG +LE ++A IE RKPDF+ F+ PQK+ AD+VI+VLPT+L  +D EGKILRVRLIQKE   Y  PVYLFD+GST+SWIPCG KLTCSYPGIK   GPD +F N V+VVEMDGQFD+L+EL YVE HL N +SK+ GE+T QMLK+
Sbjct:   43 KSRTNNNKRYLITCKAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPD-----SNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYQQVKAIKDGISVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMYDSRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAFIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKYFSPVYLFDEGSTISWIPCGRKLTCSYPGIKFFYGPDTYFGNEVSVVEMDGQFDRLDELIYVESHLSNLSSKFYGEVTQQMLKH 367          
BLAST of EWM21954.1 vs. NCBI_GenBank
Match: gi|302835521|ref|XP_002949322.1| (hypothetical protein VOLCADRAFT_104265 [Volvox carteri f. nagariensis] >gi|300265624|gb|EFJ49815.1| hypothetical protein VOLCADRAFT_104265 [Volvox carteri f. nagariensis])

HSP 1 Score: 433.721 bits (1114), Expect = 9.990e-148
Identity = 209/339 (61.65%), Postives = 261/339 (76.99%), Query Frame = 0
Query:   29 ANRWTIKAKDTS--FTRNLMMKLGADDKVILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHANDRSGRKVTGRTALEAAEQNFDLMYEQLKALKEGKTVAKPIYNHVNGTLDRPEEVVPTPIVIVEGLHPWYDARVKDLLDYTIYLDISDEIKRAWKIQRDMAERGWTLEQVEAEIEKRKPDFNKFVGPQKEVADSVIQVLPTELTNDPEGKILRVRLIQKETGD-YEPVYLFDQGSTVSWIPCGTKLTCSYPGIKLGSGPDRWFNNAVNVVEMDGQFDKLEELAYVEKHLGNTASKYDGEITAQMLKNEG 364
            A R T +++ T+   +R +++     DK ++IG+AADSGCGKSTFMRR+T+IFGG    P GG  D     +NTL+SD TTVICLDDYH  DR+GRKV G TAL    QNFDLMY Q+KALKEGK V KPIYNHV G +D PE++    I+++EGLHP++D RV DLLD+ IYLDISD+IK AWKIQRDMAERG +L+ +++ IE RKPDF+ ++ PQK+ AD +IQVLPT+L  D +G+ LRVRLIQKE    ++PVYLFD+GST+SWIPCG KLTCS+PGIK+  GPD W+   V+V+EMDGQFDKLEEL YVE HL NT++K+ GEIT QMLKN G
Sbjct:    9 APRATAQSRVTASRASRRVLVVKAQKDKTVVIGLAADSGCGKSTFMRRMTSIFGGVPKPPAGGNPD-----SNTLISDMTTVICLDDYHCLDRNGRKVKGVTALAPEAQNFDLMYNQVKALKEGKAVDKPIYNHVTGLIDAPEKIDSPNILVIEGLHPFFDKRVADLLDFKIYLDISDDIKFAWKIQRDMAERGHSLQAIKSSIEARKPDFDAYIDPQKKDADMIIQVLPTQLVPDDKGQYLRVRLIQKEGSKMFDPVYLFDEGSTISWIPCGRKLTCSFPGIKMFYGPDTWYGQEVSVLEMDGQFDKLEELIYVESHLSNTSAKFYGEITQQMLKNSG 342          
The following BLAST results are available for this feature:
BLAST of EWM21954.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102306|gb|EWM21954.1|0.000e+0100.00phosphoribulokinase [Nannochloropsis gaditana][more]
gi|299469835|emb|CBN76689.1|4.310e-16966.67Phosphoribulokinase [Ectocarpus siliculosus][more]
gi|13398515|gb|AAK21910.1|AF336986_18.510e-15668.42phosphoribulokinase [Vaucheria litorea] >gi|890776... [more]
gi|146739106|gb|ABQ42600.1|2.836e-15367.44chloroplast phosphoribulokinase precursor [Heteros... [more]
gi|349585018|dbj|BAL03266.1|2.871e-14960.80chloroplast phosphoribulokinase [Closterium perace... [more]
gi|527194042|gb|EPS63825.1|4.321e-14963.98phosphoribulokinase, partial [Genlisea aurea][more]
gi|159471788|ref|XP_001694038.1|7.032e-14862.13phosphoribulokinase [Chlamydomonas reinhardtii] >g... [more]
gi|1004141513|gb|KXZ49505.1|7.280e-14864.40hypothetical protein GPECTOR_21g731 [Gonium pector... [more]
gi|502162280|ref|XP_004512451.1|7.474e-14863.33PREDICTED: phosphoribulokinase, chloroplastic [Cic... [more]
gi|302835521|ref|XP_002949322.1|9.990e-14861.65hypothetical protein VOLCADRAFT_104265 [Volvox car... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8757rna8757Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications