EWM21942.1, cds8719 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21942.1 vs. NCBI_GenBank
Match: gi|585102294|gb|EWM21942.1| (thioredoxin-like protein 4a [Nannochloropsis gaditana]) HSP 1 Score: 382.489 bits (981), Expect = 1.336e-134 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
Query: 1 MSNLSLLLRLTFLACFFFTCNHSGERTSPASASRLLPSGKMSYMLPHLRSGWAVDQAILNEENKVVVIRFGHDENETCMQMDEILYKISEDVRNFAAIYLVDTTEVPDFNVMYELYDECTCMFFFRNKHIMIDLGTGNNNKINFLISDKQEMIDIIETVYRGARKGRGLVVSPKDYSTRYRY 182
MSNLSLLLRLTFLACFFFTCNHSGERTSPASASRLLPSGKMSYMLPHLRSGWAVDQAILNEENKVVVIRFGHDENETCMQMDEILYKISEDVRNFAAIYLVDTTEVPDFNVMYELYDECTCMFFFRNKHIMIDLGTGNNNKINFLISDKQEMIDIIETVYRGARKGRGLVVSPKDYSTRYRY
Sbjct: 1 MSNLSLLLRLTFLACFFFTCNHSGERTSPASASRLLPSGKMSYMLPHLRSGWAVDQAILNEENKVVVIRFGHDENETCMQMDEILYKISEDVRNFAAIYLVDTTEVPDFNVMYELYDECTCMFFFRNKHIMIDLGTGNNNKINFLISDKQEMIDIIETVYRGARKGRGLVVSPKDYSTRYRY 182
BLAST of EWM21942.1 vs. NCBI_GenBank
Match: gi|543260274|ref|XP_005421012.1| (PREDICTED: thioredoxin-like protein 4A isoform X1 [Geospiza fortis]) HSP 1 Score: 259.996 bits (663), Expect = 1.878e-86 Identity = 118/146 (80.82%), Postives = 132/146 (90.41%), Query Frame = 0
Query: 37 PSGKMSYMLPHLRSGWAVDQAILNEENKVVVIRFGHDENETCMQMDEILYKISEDVRNFAAIYLVDTTEVPDFNVMYELYDECTCMFFFRNKHIMIDLGTGNNNKINFLISDKQEMIDIIETVYRGARKGRGLVVSPKDYSTRYRY 182
P+ +MSYMLPHL +GW VDQAIL+EE++VVVIRFGHD + TCM+MDE+LY I+E V+NFA IYLVD TEVPDFN MYELYD CT MFFFRNKHIMIDLGTGNNNKIN+ + DKQEMIDIIETVYRGARKGRGLVVSPKDYST+YRY
Sbjct: 12 PAARMSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMIDIIETVYRGARKGRGLVVSPKDYSTKYRY 157
BLAST of EWM21942.1 vs. NCBI_GenBank
Match: gi|1062854940|ref|XP_017937124.1| (PREDICTED: thioredoxin-like protein 4A isoform X1 [Manacus vitellinus]) HSP 1 Score: 260.381 bits (664), Expect = 3.775e-86 Identity = 118/146 (80.82%), Postives = 131/146 (89.73%), Query Frame = 0
Query: 37 PSGKMSYMLPHLRSGWAVDQAILNEENKVVVIRFGHDENETCMQMDEILYKISEDVRNFAAIYLVDTTEVPDFNVMYELYDECTCMFFFRNKHIMIDLGTGNNNKINFLISDKQEMIDIIETVYRGARKGRGLVVSPKDYSTRYRY 182
P +MSYMLPHL +GW VDQAIL+EE++VVVIRFGHD + TCM+MDE+LY I+E V+NFA IYLVD TEVPDFN MYELYD CT MFFFRNKHIMIDLGTGNNNKIN+ + DKQEMIDIIETVYRGARKGRGLVVSPKDYST+YRY
Sbjct: 41 PPARMSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMIDIIETVYRGARKGRGLVVSPKDYSTKYRY 186
BLAST of EWM21942.1 vs. NCBI_GenBank
Match: gi|1051118397|ref|XP_017676893.1| (PREDICTED: thioredoxin-like protein 4A isoform X2 [Lepidothrix coronata]) HSP 1 Score: 258.84 bits (660), Expect = 1.084e-85 Identity = 118/146 (80.82%), Postives = 131/146 (89.73%), Query Frame = 0
Query: 37 PSGKMSYMLPHLRSGWAVDQAILNEENKVVVIRFGHDENETCMQMDEILYKISEDVRNFAAIYLVDTTEVPDFNVMYELYDECTCMFFFRNKHIMIDLGTGNNNKINFLISDKQEMIDIIETVYRGARKGRGLVVSPKDYSTRYRY 182
P +MSYMLPHL +GW VDQAIL+EE++VVVIRFGHD + TCM+MDE+LY I+E V+NFA IYLVD TEVPDFN MYELYD CT MFFFRNKHIMIDLGTGNNNKIN+ + DKQEMIDIIETVYRGARKGRGLVVSPKDYST+YRY
Sbjct: 33 PPARMSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMIDIIETVYRGARKGRGLVVSPKDYSTKYRY 178
BLAST of EWM21942.1 vs. NCBI_GenBank
Match: gi|1051118395|ref|XP_017676885.1| (PREDICTED: thioredoxin-like protein 4A isoform X1 [Lepidothrix coronata]) HSP 1 Score: 258.84 bits (660), Expect = 1.201e-85 Identity = 118/146 (80.82%), Postives = 131/146 (89.73%), Query Frame = 0
Query: 37 PSGKMSYMLPHLRSGWAVDQAILNEENKVVVIRFGHDENETCMQMDEILYKISEDVRNFAAIYLVDTTEVPDFNVMYELYDECTCMFFFRNKHIMIDLGTGNNNKINFLISDKQEMIDIIETVYRGARKGRGLVVSPKDYSTRYRY 182
P +MSYMLPHL +GW VDQAIL+EE++VVVIRFGHD + TCM+MDE+LY I+E V+NFA IYLVD TEVPDFN MYELYD CT MFFFRNKHIMIDLGTGNNNKIN+ + DKQEMIDIIETVYRGARKGRGLVVSPKDYST+YRY
Sbjct: 37 PPARMSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMIDIIETVYRGARKGRGLVVSPKDYSTKYRY 182
BLAST of EWM21942.1 vs. NCBI_GenBank
Match: gi|676284727|gb|KFO37224.1| (Thioredoxin-like protein 4A [Fukomys damarensis]) HSP 1 Score: 261.922 bits (668), Expect = 9.740e-85 Identity = 121/165 (73.33%), Postives = 138/165 (83.64%), Query Frame = 0
Query: 24 GERTSPASASRLL------PSGKMSYMLPHLRSGWAVDQAILNEENKVVVIRFGHDENETCMQMDEILYKISEDVRNFAAIYLVDTTEVPDFNVMYELYDECTCMFFFRNKHIMIDLGTGNNNKINFLISDKQEMIDIIETVYRGARKGRGLVVSPKDYSTRYRY 182
G+ +P A+R P +MSYMLPHL +GW VDQAIL+EE++VVVIRFGHD + TCM+MDE+LY I+E V+NFA IYLVD TEVPDFN MYELYD CT MFFFRNKHIMIDLGTGNNNKIN+ + DKQEM+DIIETVYRGARKGRGLVVSPKDYST+YRY
Sbjct: 170 GDWATPDEATRARYSAAEPPGPRMSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRGARKGRGLVVSPKDYSTKYRY 334
BLAST of EWM21942.1 vs. NCBI_GenBank
Match: gi|658873492|ref|XP_008419697.1| (PREDICTED: thioredoxin-like protein 4A [Poecilia reticulata]) HSP 1 Score: 254.603 bits (649), Expect = 1.303e-84 Identity = 116/142 (81.69%), Postives = 130/142 (91.55%), Query Frame = 0
Query: 41 MSYMLPHLRSGWAVDQAILNEENKVVVIRFGHDENETCMQMDEILYKISEDVRNFAAIYLVDTTEVPDFNVMYELYDECTCMFFFRNKHIMIDLGTGNNNKINFLISDKQEMIDIIETVYRGARKGRGLVVSPKDYSTRYRY 182
MSYMLPHL +GW VDQAIL+EE++V+VIRFGHD + TCM+MDE+LY I+E V+NFA IYLVD TEVPDFN MYELYD CT MFFFRNKHIMIDLGTGNNNKIN++I DKQEMIDI+ETVYRGARKGRGLVVSPKDYST+YRY
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVLVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTAMFFFRNKHIMIDLGTGNNNKINWIIEDKQEMIDIVETVYRGARKGRGLVVSPKDYSTKYRY 142
BLAST of EWM21942.1 vs. NCBI_GenBank
Match: gi|617424927|ref|XP_007559818.1| (PREDICTED: thioredoxin-like protein 4A [Poecilia formosa] >gi|831545806|ref|XP_012726364.1| thioredoxin-like protein 4A [Fundulus heteroclitus] >gi|928054576|ref|XP_013876559.1| PREDICTED: thioredoxin-like protein 4A [Austrofundulus limnaeus] >gi|961922711|ref|XP_014908798.1| PREDICTED: thioredoxin-like protein 4A [Poecilia latipinna] >gi|961935770|ref|XP_014865156.1| PREDICTED: thioredoxin-like protein 4A [Poecilia mexicana] >gi|974099520|ref|XP_015248414.1| PREDICTED: thioredoxin-like protein 4A [Cyprinodon variegatus] >gi|1007741869|ref|XP_015811180.1| PREDICTED: thioredoxin-like protein 4A [Nothobranchius furzeri] >gi|1041106632|ref|XP_017276501.1| PREDICTED: thioredoxin-like protein 4A [Kryptolebias marmoratus]) HSP 1 Score: 254.603 bits (649), Expect = 1.587e-84 Identity = 116/142 (81.69%), Postives = 130/142 (91.55%), Query Frame = 0
Query: 41 MSYMLPHLRSGWAVDQAILNEENKVVVIRFGHDENETCMQMDEILYKISEDVRNFAAIYLVDTTEVPDFNVMYELYDECTCMFFFRNKHIMIDLGTGNNNKINFLISDKQEMIDIIETVYRGARKGRGLVVSPKDYSTRYRY 182
MSYMLPHL +GW VDQAIL+EE++V+VIRFGHD + TCM+MDE+LY I+E V+NFA IYLVD TEVPDFN MYELYD CT MFFFRNKHIMIDLGTGNNNKIN++I DKQEMIDI+ETVYRGARKGRGLVVSPKDYST+YRY
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVLVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWIIEDKQEMIDIVETVYRGARKGRGLVVSPKDYSTKYRY 142
BLAST of EWM21942.1 vs. NCBI_GenBank
Match: gi|551521517|ref|XP_005812248.1| (PREDICTED: thioredoxin-like protein 4A [Xiphophorus maculatus]) HSP 1 Score: 254.218 bits (648), Expect = 2.064e-84 Identity = 116/142 (81.69%), Postives = 130/142 (91.55%), Query Frame = 0
Query: 41 MSYMLPHLRSGWAVDQAILNEENKVVVIRFGHDENETCMQMDEILYKISEDVRNFAAIYLVDTTEVPDFNVMYELYDECTCMFFFRNKHIMIDLGTGNNNKINFLISDKQEMIDIIETVYRGARKGRGLVVSPKDYSTRYRY 182
MSYMLPHL +GW VDQAIL+EE++V+VIRFGHD + TCM+MDE+LY I+E V+NFA IYLVD TEVPDFN MYELYD CT MFFFRNKHIMIDLGTGNNNKIN++I DKQEMIDI+ETVYRGARKGRGLVVSPKDYST+YRY
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVLVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTIMFFFRNKHIMIDLGTGNNNKINWIIEDKQEMIDIVETVYRGARKGRGLVVSPKDYSTKYRY 142
BLAST of EWM21942.1 vs. NCBI_GenBank
Match: gi|1061478084|gb|ODM95739.1| (Thioredoxin-like protein 4A [Orchesella cincta]) HSP 1 Score: 253.832 bits (647), Expect = 2.686e-84 Identity = 114/142 (80.28%), Postives = 130/142 (91.55%), Query Frame = 0
Query: 41 MSYMLPHLRSGWAVDQAILNEENKVVVIRFGHDENETCMQMDEILYKISEDVRNFAAIYLVDTTEVPDFNVMYELYDECTCMFFFRNKHIMIDLGTGNNNKINFLISDKQEMIDIIETVYRGARKGRGLVVSPKDYSTRYRY 182
MSYMLPHL +GW VDQAIL+EE++VV+IRFGHD + TCM+MDE+LY I+E V+NFA +YLVD +EVPDFN MYELYD CTCMFFFRNKHIMIDLGTGNNNKIN+ + DKQEMIDI+ETVYRGARKGRGLVVSPKDYST+YRY
Sbjct: 1 MSYMLPHLHNGWQVDQAILSEEDRVVIIRFGHDWDPTCMKMDEVLYGIAEKVKNFAGVYLVDISEVPDFNKMYELYDPCTCMFFFRNKHIMIDLGTGNNNKINWALEDKQEMIDIVETVYRGARKGRGLVVSPKDYSTKYRY 142 The following BLAST results are available for this feature:
BLAST of EWM21942.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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