EWM21964.1, cds8709 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21964.1 vs. NCBI_GenBank
Match: gi|585102327|gb|EWM21964.1| (cyclic nucleotide-binding protein [Nannochloropsis gaditana]) HSP 1 Score: 461.07 bits (1185), Expect = 5.528e-164 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0 Query: 1 MDTSVPLNEWAGLEHHILFPLRAVRAQARLRRLPLVGRAVQYLLGKKLAFFFELAVVFIQSHSNAHKKLNELFGKNGPVTRQLEKEVEEEVGKAKAALEEFVPVFPDIINSVKTEMAARYMLNKCRSMLEAAMESGSLEKREFEDAIREVSAWTTPWLNSTTTPTPRPPPPDPPSWPASPSSASSLPPSATSSSPLPPPSAVTCTSGATPASSPKRPPSLPPPLLPSRAGT 231 MDTSVPLNEWAGLEHHILFPLRAVRAQARLRRLPLVGRAVQYLLGKKLAFFFELAVVFIQSHSNAHKKLNELFGKNGPVTRQLEKEVEEEVGKAKAALEEFVPVFPDIINSVKTEMAARYMLNKCRSMLEAAMESGSLEKREFEDAIREVSAWTTPWLNSTTTPTPRPPPPDPPSWPASPSSASSLPPSATSSSPLPPPSAVTCTSGATPASSPKRPPSLPPPLLPSRAGT Sbjct: 1 MDTSVPLNEWAGLEHHILFPLRAVRAQARLRRLPLVGRAVQYLLGKKLAFFFELAVVFIQSHSNAHKKLNELFGKNGPVTRQLEKEVEEEVGKAKAALEEFVPVFPDIINSVKTEMAARYMLNKCRSMLEAAMESGSLEKREFEDAIREVSAWTTPWLNSTTTPTPRPPPPDPPSWPASPSSASSLPPSATSSSPLPPPSAVTCTSGATPASSPKRPPSLPPPLLPSRAGT 231
BLAST of EWM21964.1 vs. NCBI_GenBank
Match: gi|585105239|gb|EWM23953.1| (na+ h+ antiporter [Nannochloropsis gaditana]) HSP 1 Score: 106.301 bits (264), Expect = 1.032e-22 Identity = 57/147 (38.78%), Postives = 84/147 (57.14%), Query Frame = 0 Query: 1 MDTSVPLNEWAGLEHHILFPLRAVRAQARLRRLPLVGRAVQYLLGKKLAFFFELAVVFIQSHSNAHKKLNELFGKNGPVTRQLEKEVEEEVGKAKAALEEFVPVFPDIINSVKTEMAARYMLNKCRSMLEAAMESGSLEKREFEDAI 147 +D LNEW LE I PL A+R RL R ++ L +LAF F LAV FI++H + + L ++ G GP T LE+EV E+ A+ +E ++P++P+ NSVKTE+A +L RS+LE + E G L +R + A+ Sbjct: 839 LDPGCELNEWRTLEREIWIPLNALRLAKRLSRSAIIRPLANSFLFSRLAFLFGLAVNFIKAHRSLAEDLGKILGA-GPTTTILEQEVWREIEDAQRTIEMYLPIYPNTFNSVKTEIATSVVLQHFRSLLEESHEMGILHERRYHKAV 984
BLAST of EWM21964.1 vs. NCBI_GenBank
Match: gi|676382579|ref|XP_009034568.1| (hypothetical protein AURANDRAFT_22521, partial [Aureococcus anophagefferens] >gi|323455139|gb|EGB11008.1| hypothetical protein AURANDRAFT_22521, partial [Aureococcus anophagefferens]) HSP 1 Score: 87.4261 bits (215), Expect = 3.269e-16 Identity = 52/161 (32.30%), Postives = 87/161 (54.04%), Query Frame = 0 Query: 2 DTSVPLNEWAGLEHHILFPLRAVRAQARLRRLPL---------VGRAVQYLLGKKLAFFFELAVVFIQSHSNA-HKKLNELFGKNGPVTRQLEKEVEEEVGKAKAALEEFVPVFPDIINSVKTEMAARYMLNKCRSMLEAAMESGSLEKREFEDAIREVSA 152 D S PL+EW LE H L+P +ARL R+ V +VQ ++ +++AF FE+A FI +H + H E GPV L +EV + AKA + E++ VFP+ N++KT++AA ++L + +++ + E G + +E + R ++A Sbjct: 537 DESRPLDEWERLEAHDLWP------KARLSRIQYLNTYIPSERVRESVQGVIFRRMAFVFEVAYNFIHAHEDVEHALAAEEIVDAGPVQEALVEEVAKMQAMAKATIAEYIDVFPESANAIKTQVAASFVLVRQHELMKESREHGHITAKELGECERHINA 691
BLAST of EWM21964.1 vs. NCBI_GenBank
Match: gi|298713163|emb|CBJ26919.1| (Sodium/hydrogen exchanger family [Ectocarpus siliculosus]) HSP 1 Score: 65.855 bits (159), Expect = 9.075e-9 Identity = 47/143 (32.87%), Postives = 68/143 (47.55%), Query Frame = 0 Query: 2 DTSVPLNEWAGLEHHILFPLRAVRAQARLRRLPLVGRAVQYLLGKKLAFFFELAVVFIQSHSNAHKKLNELFGKNGPVTRQLEKEVEEEVGKAKAALEEFVPVFPDIINSVKTEMAARYMLNKCRSMLEAAMESGSLEKREFE 144 D+ L EWA L P + + LR LP++G+ V + KKLAF FELA FI +H + + EL G QL +E +++ A L +P FP E+AAR++L K R + G L ++E E Sbjct: 872 DSYAALEEWARLRESFTIPEYQLNMASALRHLPIIGQIVGGWIFKKLAFVFELASNFIAAHEDI--DILELL-PEGDAANQLARENLKQLDDASGTLGHQLPAFP--------EVAARFLLAKHREFVHEMFLDGLLNEKEAE 1003
BLAST of EWM21964.1 vs. NCBI_GenBank
Match: gi|501491916|ref|WP_012500358.1| (cyclic nucleotide-binding protein [Chloroherpeton thalassium] >gi|193088999|gb|ACF14274.1| cyclic nucleotide-binding protein [Chloroherpeton thalassium ATCC 35110]) HSP 1 Score: 64.3142 bits (155), Expect = 2.491e-8 Identity = 41/149 (27.52%), Postives = 75/149 (50.34%), Query Frame = 0 Query: 2 DTSVPLNEWAGLEHHILFPLRAVRAQARLRRLPLVGRAVQYLLGKKLAFFFELAVVFIQSHSNAHKKLNELFGKNGPVTRQLEKEVEEEVGKAKAALEEFVPVFPDIINSVKTEMAARYMLNKCRSMLEAAMESGSLEKREFEDAIREV 150 D L++W LEH FP +L+ P++G+ V+ L +LAF +++A ++ +H + L + + V L+ E+ G A A+++ FP+I +++T+ AAR +LN R+ ++ E G L + E E + V Sbjct: 547 DDEGSLDDWKELEHLWQFP----AILTKLQSFPVIGKMVRRTLYDRLAFGYDIARGYVVAHEEISETLESIIHDDA-VAMNLQVEMNYNRGIALGAIKKLRETFPEITMAIETKTAARLILNHERNSIKKMYEGGMLNEIEKERLVAAV 690
BLAST of EWM21964.1 vs. NCBI_GenBank
Match: gi|655137438|ref|WP_028584361.1| (hypothetical protein [Desulfobulbus mediterraneus]) HSP 1 Score: 61.6178 bits (148), Expect = 2.112e-7 Identity = 41/143 (28.67%), Postives = 74/143 (51.75%), Query Frame = 0 Query: 30 LRRLPLVGRAVQYLLGKKLAFFFELAVVFIQSHSNAHKKLNELFGKNGPVTRQLEKEVEEEVGKAKAALEEFVPVFPDIINSVKTEMAARYMLNKCRSMLEAAMESGSLEKREFEDAIREVSAWTTPWLNSTTTPTPRPPPPD 172 L R+PL+ R + + +LA +++A FI + N++ K+ EL + +++ EV A +E+ FP++I +++T A+R +LN+ R+ +E ++ G L+K E + EV L+ T T PPP D Sbjct: 561 LERVPLLNRLLLSISFDRLALGYDVARGFIHA-MNSYPKMIELLDPSPQSAEEVQGEVLRNKRIAYERIEQLRQAFPEVIIALETRAASRSLLNRQRATIEGLLDDGLLDKAEADKMFDEVET-RLKQLHQTPTKIEVPPPRD 701
BLAST of EWM21964.1 vs. NCBI_GenBank
Match: gi|298705240|emb|CBJ34146.1| (cyclic nucleotide-binding protein [Ectocarpus siliculosus]) HSP 1 Score: 60.077 bits (144), Expect = 3.468e-7 Identity = 38/107 (35.51%), Postives = 60/107 (56.07%), Query Frame = 0 Query: 46 KKLAFFFELAVVFIQSHSNAHKKLNELFGKNGPVTRQLEKEVEEEVGKAKAALEEFVPVFPDIINSVKTEMAARYMLNKCRSMLEAAMESGSLEKREFEDAIREVSA 152 ++L F FELA FI +H + + EL + GPV QL E ++ A++ L + +PVFP++ S+KT +AA+YML + ++ G + RE E I E +A Sbjct: 3 RRLMFIFELASNFISAHEDV--DILELLHE-GPVAYQLALEKNRQLQDARSTLSQQLPVFPELARSLKTRVAAKYMLVQHPEVVHELFHHGHINDRESEGLIAENNA 106 The following BLAST results are available for this feature:
BLAST of EWM21964.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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