EWM21974.1, cds8698 (CDS) Nannochloropsis gaditana

Overview
NameEWM21974.1
Unique Namecds8698
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:9709..9711 -
Alignment locationKK037250.1:9601..9641 -
Alignment locationKK037250.1:9207..9478 -
Alignment locationKK037250.1:8450..9009 -

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Properties
Property NameValue
Protein idEWM21974.1
ProductMD-2-related lipid-recognition protein
Orig transcript idgnl|cribi|Naga_100720g2.4455.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:9709..9711 -
KK037250.1supercontigKK037250.1:9601..9641 -
KK037250.1supercontigKK037250.1:9207..9478 -
KK037250.1supercontigKK037250.1:8450..9009 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR014756Ig_E-set
IPR003172ML_dom
Homology
[Close]
BLAST of EWM21974.1 vs. NCBI_GenBank
Match: gi|585102350|gb|EWM21974.1| (MD-2-related lipid-recognition protein [Nannochloropsis gaditana])

HSP 1 Score: 586.26 bits (1510), Expect = 0.000e+0
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0 
Query:    1 MKCLDHETRLNKPNDRRAQVILVEEKKVMRLLPRLFYVAIPLFWSLLPYVISEDHLLPFKLCGPDELGVEVIRLNAWPLVPGRELTITAIYTPNVTVTGGEALVTVHVLGIPLTERRAICHESGVHCPLLLHHSTTSVIHAHVPGLTPGFGVDARVELFDGRGRRLTCLDARVEVRTHPLIGVPSWSKPSLALSPTLSPDSPTTTPFASSSSPVVSSLSSLLSSLPAQSAAVALSSTEDGTTGIKQALDQFIKLRHQDFAVEAQEPRDESTSDRNGPLREDHGDRIRLRRE 291
            MKCLDHETRLNKPNDRRAQVILVEEKKVMRLLPRLFYVAIPLFWSLLPYVISEDHLLPFKLCGPDELGVEVIRLNAWPLVPGRELTITAIYTPNVTVTGGEALVTVHVLGIPLTERRAICHESGVHCPLLLHHSTTSVIHAHVPGLTPGFGVDARVELFDGRGRRLTCLDARVEVRTHPLIGVPSWSKPSLALSPTLSPDSPTTTPFASSSSPVVSSLSSLLSSLPAQSAAVALSSTEDGTTGIKQALDQFIKLRHQDFAVEAQEPRDESTSDRNGPLREDHGDRIRLRRE
Sbjct:    1 MKCLDHETRLNKPNDRRAQVILVEEKKVMRLLPRLFYVAIPLFWSLLPYVISEDHLLPFKLCGPDELGVEVIRLNAWPLVPGRELTITAIYTPNVTVTGGEALVTVHVLGIPLTERRAICHESGVHCPLLLHHSTTSVIHAHVPGLTPGFGVDARVELFDGRGRRLTCLDARVEVRTHPLIGVPSWSKPSLALSPTLSPDSPTTTPFASSSSPVVSSLSSLLSSLPAQSAAVALSSTEDGTTGIKQALDQFIKLRHQDFAVEAQEPRDESTSDRNGPLREDHGDRIRLRRE 291
[Close]
BLAST of EWM21974.1 vs. NCBI_GenBank
Match: gi|553180303|ref|XP_005853383.1| (npc21 dicdi ame: phosphatidylglycerol phosphatidylinositol transfer protein 1 [Nannochloropsis gaditana CCMP526] >gi|422295678|gb|EKU22977.1| npc21 dicdi ame: phosphatidylglycerol phosphatidylinositol transfer protein 1 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 523.087 bits (1346), Expect = 0.000e+0
Identity = 261/263 (99.24%), Postives = 262/263 (99.62%), Query Frame = 0 
Query:   29 MRLLPRLFYVAIPLFWSLLPYVISEDHLLPFKLCGPDELGVEVIRLNAWPLVPGRELTITAIYTPNVTVTGGEALVTVHVLGIPLTERRAICHESGVHCPLLLHHSTTSVIHAHVPGLTPGFGVDARVELFDGRGRRLTCLDARVEVRTHPLIGVPSWSKPSLALSPTLSPDSPTTTPFASSSSPVVSSLSSLLSSLPAQSAAVALSSTEDGTTGIKQALDQFIKLRHQDFAVEAQEPRDESTSDRNGPLREDHGDRIRLRRE 291
            MRLLPRLFYVAIPLFWSLLPYVISEDHLLPFKLCGPDELGVEVIRLNAWPLVPGRELTITAIYTPNVTVTGGEALVTVHVLGIPLTERRAICHESGVHCPLL HHSTTSVIHAHVPGLTPGFGVDARVELFDGRGRRLTCLDARVEVRTHPLIGVPSWSKPSLALSPTLSPDSPTTTPFASSSSPVVSSLSSLLSSLPAQSAAVALSSTEDGTTGIKQALDQFIKLRHQDFAVEAQ+PRDESTSDRNGPLREDHGDRIRLRRE
Sbjct:    1 MRLLPRLFYVAIPLFWSLLPYVISEDHLLPFKLCGPDELGVEVIRLNAWPLVPGRELTITAIYTPNVTVTGGEALVTVHVLGIPLTERRAICHESGVHCPLLPHHSTTSVIHAHVPGLTPGFGVDARVELFDGRGRRLTCLDARVEVRTHPLIGVPSWSKPSLALSPTLSPDSPTTTPFASSSSPVVSSLSSLLSSLPAQSAAVALSSTEDGTTGIKQALDQFIKLRHQDFAVEAQDPRDESTSDRNGPLREDHGDRIRLRRE 263
The following BLAST results are available for this feature:
BLAST of EWM21974.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585102350|gb|EWM21974.1|0.000e+0100.00MD-2-related lipid-recognition protein [Nannochlor... [more]
gi|553180303|ref|XP_005853383.1|0.000e+099.24npc21 dicdi ame: phosphatidylglycerol phosphatidyl... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8727rna8727Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications