EWM21979.1, cds8694 (CDS) Nannochloropsis gaditana

Overview
NameEWM21979.1
Unique Namecds8694
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:928..935 -
Alignment locationKK037250.1:346..624 -
Alignment locationKK037250.1:95..128 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21979.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101510g1.2165.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:928..935 -
KK037250.1supercontigKK037250.1:346..624 -
KK037250.1supercontigKK037250.1:95..128 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM21979.1 vs. NCBI_GenBank
Match: gi|585102357|gb|EWM21979.1| (hypothetical protein Naga_101510g1 [Nannochloropsis gaditana])

HSP 1 Score: 215.312 bits (547), Expect = 6.530e-71
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 
Query:    1 MPSQGRERWEAKPLLGRFFFPAAASFIVLEMKLVMNAEVAAKHPLASRTQAKTKIHISSVLFFLLLSQLCYSQIDAFVGLVRFSGLWRAEPLPCVSFRSTPPPARW 106
            MPSQGRERWEAKPLLGRFFFPAAASFIVLEMKLVMNAEVAAKHPLASRTQAKTKIHISSVLFFLLLSQLCYSQIDAFVGLVRFSGLWRAEPLPCVSFRSTPPPARW
Sbjct:    1 MPSQGRERWEAKPLLGRFFFPAAASFIVLEMKLVMNAEVAAKHPLASRTQAKTKIHISSVLFFLLLSQLCYSQIDAFVGLVRFSGLWRAEPLPCVSFRSTPPPARW 106
The following BLAST results are available for this feature:
BLAST of EWM21979.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102357|gb|EWM21979.1|6.530e-71100.00hypothetical protein Naga_101510g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8723rna8723Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications