EWM29816.1, cds869 (CDS) Nannochloropsis gaditana

Overview
NameEWM29816.1
Unique Namecds869
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:607887..608180 +
Alignment locationCM002456.1:608359..608697 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29816.1
Productfamily s49
Orig transcript idgnl|cribi|Naga_100017g61.314.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:607887..608180 +
CM002456.1supercontigCM002456.1:608359..608697 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0008233peptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
GO:0006508proteolysis
Vocabulary: INTERPRO
TermDefinition
IPR002142Peptidase_S49
IPR029045ClpP/crotonase-like_dom
Homology
BLAST of EWM29816.1 vs. NCBI_GenBank
Match: gi|585112397|gb|EWM29816.1| (family s49 [Nannochloropsis gaditana])

HSP 1 Score: 424.091 bits (1089), Expect = 3.710e-150
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0
Query:    1 MPSIACTYSMAIFPQDVAASGGYWLLAAGQEVYADKASIVGSVGVVSGGFGLHKLLEHHGIERRLHTAGTSKARLDPFLPARAEDVAYLRDTLAEIHEVFKAHVRARRGAKISGHESTIFSGDFFTGARGVELGLVDAIGSLQSVSKEKLGEKVRINYLNARPRFPFLPGLGTGTGDGSRMSWSAHLADAILESAEERIEERLWRSRVGL 210
            MPSIACTYSMAIFPQDVAASGGYWLLAAGQEVYADKASIVGSVGVVSGGFGLHKLLEHHGIERRLHTAGTSKARLDPFLPARAEDVAYLRDTLAEIHEVFKAHVRARRGAKISGHESTIFSGDFFTGARGVELGLVDAIGSLQSVSKEKLGEKVRINYLNARPRFPFLPGLGTGTGDGSRMSWSAHLADAILESAEERIEERLWRSRVGL
Sbjct:    1 MPSIACTYSMAIFPQDVAASGGYWLLAAGQEVYADKASIVGSVGVVSGGFGLHKLLEHHGIERRLHTAGTSKARLDPFLPARAEDVAYLRDTLAEIHEVFKAHVRARRGAKISGHESTIFSGDFFTGARGVELGLVDAIGSLQSVSKEKLGEKVRINYLNARPRFPFLPGLGTGTGDGSRMSWSAHLADAILESAEERIEERLWRSRVGL 210          
BLAST of EWM29816.1 vs. NCBI_GenBank
Match: gi|757149963|ref|WP_042704160.1| (S49 family peptidase [Azospirillum sp. B506])

HSP 1 Score: 181.8 bits (460), Expect = 2.221e-53
Identity = 95/200 (47.50%), Postives = 132/200 (66.00%), Query Frame = 0
Query:   13 FPQDVAASGGYWLLAAGQEVYADKASIVGSVGVVSGGFGLHKLLEHHGIERRLHTAGTSKARLDPFLPARAEDVAYLRDTLAEIHEVFKAHVRARRGAKISGHESTIFSGDFFTGARGVELGLVDAIGSLQSVSKEKLGEKVRINYLNARPRFPFLPGLGTGTGDGSRMSWSAH--LADAILESAEERIEERLWRSRVGL 210
            F +D AASGGYWL  A  E++AD++SIVGS+GVVS GFGLH L+E HGIERRL+TAG  K  LDPF P R + VA+L+   A++HE FKA VRARRG +++G E  +FSG F+ G R + LGL+D +G ++SV + + GEKVR+  +          G+  G GD   +    H   ADA++ +A   +++   R+R+GL
Sbjct:   97 FCEDAAASGGYWLACAADEIWADESSIVGSIGVVSSGFGLHGLIERHGIERRLYTAGDKKVLLDPFSPEREDGVAHLKALQADVHEAFKAMVRARRGTRLTGPEEELFSGAFWAGRRALALGLIDGLGDIRSVLRGRFGEKVRLRVVPQDRGMLRRLGMRAGYGDAPALETGTHEAFADALVRAARASLDDWAARARLGL 296          
BLAST of EWM29816.1 vs. NCBI_GenBank
Match: gi|502740820|ref|WP_012975804.1| (S49 family peptidase [Azospirillum lipoferum] >gi|288912420|dbj|BAI73908.1| serine protease (plasmid) [Azospirillum sp. B510])

HSP 1 Score: 181.03 bits (458), Expect = 6.007e-53
Identity = 93/200 (46.50%), Postives = 133/200 (66.50%), Query Frame = 0
Query:   13 FPQDVAASGGYWLLAAGQEVYADKASIVGSVGVVSGGFGLHKLLEHHGIERRLHTAGTSKARLDPFLPARAEDVAYLRDTLAEIHEVFKAHVRARRGAKISGHESTIFSGDFFTGARGVELGLVDAIGSLQSVSKEKLGEKVRINYLNARPRFPFLPGLGTGTGDGSRMSWSAH--LADAILESAEERIEERLWRSRVGL 210
            F +D AASGGYWL  A  E++AD++SI+GS+GVVS GFGLH L+E HGIERRL+TAG  K  LDPF P R + VA+L+   A++HE FKA VR+RRG ++ G E  +FSG F+ G + + LGL+D +G ++SV + + GEKVR+  +          GL  G GD   ++  A    ADA++ +A + ++E   ++R+GL
Sbjct:   97 FCEDAAASGGYWLACAADEIWADESSILGSIGVVSSGFGLHGLIERHGIERRLYTAGDRKVLLDPFSPEREDGVAHLKALQADVHEAFKAMVRSRRGDRLKGAEEDLFSGAFWAGRKALALGLIDGLGDIRSVMRGRFGEKVRLRVVERERGLLRRAGLKAGYGDAPALTAGASEAFADALVSAARQSLDEWAAKARLGL 296          
BLAST of EWM29816.1 vs. NCBI_GenBank
Match: gi|916723478|ref|WP_051330569.1| (S49 family peptidase [Niveispirillum irakense])

HSP 1 Score: 179.874 bits (455), Expect = 1.025e-52
Identity = 99/187 (52.94%), Postives = 128/187 (68.45%), Query Frame = 0
Query:   13 FPQDVAASGGYWLLAAGQEVYADKASIVGSVGVVSGGFGLHKLLEHHGIERRLHTAGTSKARLDPFLPARAEDVAYLRDTLAEIHEVFKAHVRARRGAKISGH-ESTIFSGDFFTGARGVELGLVDAIGSLQSVSKEKLGEKVRINYLNARPRFPFLPGLGTGTGDGSRMSWSAHLADAILESAEER 198
            F +DVAASGGYWL  A  E+ AD ASIVGS+GVVS GFG   L+   G+ERR+HT+GTSKA LDPF P R +DVA+L    AE+HE FK  VR RRGA++ G  E+ +F+G F++GAR +ELGLVD +G ++SV +E+ GEKVRI+ +N   R    PG+G   G       +A LA+  L+ A ER
Sbjct:   93 FVEDVAASGGYWLACAADEIVADPASIVGSIGVVSAGFGFTDLIAKIGVERRVHTSGTSKAMLDPFRPERPDDVAHLEALQAEVHEGFKQWVRQRRGARLDGKDEAELFNGAFWSGARALELGLVDRLGDVRSVMRERFGEKVRIHVVNPTKR----PGIGRLIGLD-----TATLAEGALDLASER 270          
BLAST of EWM29816.1 vs. NCBI_GenBank
Match: gi|1184513580|ref|WP_085083916.1| (S49 family peptidase [Azospirillum oryzae] >gi|1182759022|emb|SMF32091.1| signal peptide peptidase SppA [Azospirillum oryzae])

HSP 1 Score: 179.489 bits (454), Expect = 1.734e-52
Identity = 91/174 (52.30%), Postives = 119/174 (68.39%), Query Frame = 0
Query:   13 FPQDVAASGGYWLLAAGQEVYADKASIVGSVGVVSGGFGLHKLLEHHGIERRLHTAGTSKARLDPFLPARAEDVAYLRDTLAEIHEVFKAHVRARRGAKISGHESTIFSGDFFTGARGVELGLVDAIGSLQSVSKEKLGEKVRINYLNARPRFPFLPGLGTGTGDGSRMSWSAH 186
            F +D AASGGYWL  A  E++AD++SIVGS+GVVS GFGLH L+E HGIERRL+TAG  K  LDPF P R + VA+L+   A++HE FKA VRARRGA+++G E  +FSG F+ G R + LGL+D +G L+SV + + GEKVR+  +          GL TG G+   +   AH
Sbjct:   97 FCEDAAASGGYWLACAADEIWADESSIVGSIGVVSSGFGLHALIERHGIERRLYTAGDKKVLLDPFSPEREDGVAHLKALQADVHEAFKAMVRARRGARLTGPEEELFSGAFWAGRRALALGLIDGLGDLRSVMRGRFGEKVRLRVVQQERGMLRRLGLRTGYGNAPALEAGAH 270          
BLAST of EWM29816.1 vs. NCBI_GenBank
Match: gi|739591881|ref|WP_037449478.1| (S49 family peptidase [Skermanella stibiiresistens])

HSP 1 Score: 178.333 bits (451), Expect = 5.155e-52
Identity = 96/201 (47.76%), Postives = 131/201 (65.17%), Query Frame = 0
Query:   13 FPQDVAASGGYWLLAAGQEVYADKASIVGSVGVVSGGFGLHKLLEHHGIERRLHTAGTSKARLDPFLPARAEDVAYLRDTLAEIHEVFKAHVRARRGAKISGHESTIFSGDFFTGARGVELGLVDAIGSLQSVSKEKLGEKVRINYLNARPRFPFLPGLGTGTGDGSRM---SWSAHLADAILESAEERIEERLWRSRVGL 210
            F +DVAASGGYWL  A  E+YAD +SI+GS+GVVS GFG   L+  HGIERR+HT+GT+KA LDPF P R EDV  L+    EIH+ FK  VR+RRG ++ G +  +F+G+F+TGA+ ++LGL+D +G L+SV + + GEKV +  ++A  R+ +   + T  G  S M       +LAD    +    IEER   SR GL
Sbjct:   93 FAEDVAASGGYWLACAADEIYADPSSIIGSIGVVSAGFGFQDLIARHGIERRVHTSGTNKAMLDPFKPERDEDVVRLKAIQTEIHDAFKTMVRSRRGDRLKGGDEDLFTGEFWTGAKALDLGLIDGLGDLRSVMRGRFGEKVDLRLVHADRRW-WRGRIKTEGGAFSSMVPAMLPTNLADDFAGAMINAIEERAIWSRFGL 292          
BLAST of EWM29816.1 vs. NCBI_GenBank
Match: gi|587642300|gb|EWY41311.1| (peptidase S49 [Skermanella stibiiresistens SB22])

HSP 1 Score: 178.333 bits (451), Expect = 5.912e-52
Identity = 96/201 (47.76%), Postives = 131/201 (65.17%), Query Frame = 0
Query:   13 FPQDVAASGGYWLLAAGQEVYADKASIVGSVGVVSGGFGLHKLLEHHGIERRLHTAGTSKARLDPFLPARAEDVAYLRDTLAEIHEVFKAHVRARRGAKISGHESTIFSGDFFTGARGVELGLVDAIGSLQSVSKEKLGEKVRINYLNARPRFPFLPGLGTGTGDGSRM---SWSAHLADAILESAEERIEERLWRSRVGL 210
            F +DVAASGGYWL  A  E+YAD +SI+GS+GVVS GFG   L+  HGIERR+HT+GT+KA LDPF P R EDV  L+    EIH+ FK  VR+RRG ++ G +  +F+G+F+TGA+ ++LGL+D +G L+SV + + GEKV +  ++A  R+ +   + T  G  S M       +LAD    +    IEER   SR GL
Sbjct:   96 FAEDVAASGGYWLACAADEIYADPSSIIGSIGVVSAGFGFQDLIARHGIERRVHTSGTNKAMLDPFKPERDEDVVRLKAIQTEIHDAFKTMVRSRRGDRLKGGDEDLFTGEFWTGAKALDLGLIDGLGDLRSVMRGRFGEKVDLRLVHADRRW-WRGRIKTEGGAFSSMVPAMLPTNLADDFAGAMINAIEERAIWSRFGL 295          
BLAST of EWM29816.1 vs. NCBI_GenBank
Match: gi|930063831|ref|WP_054165973.1| (S49 family peptidase [alpha proteobacterium AAP38] >gi|929706118|gb|KPF88188.1| peptidase S49 [alpha proteobacterium AAP38])

HSP 1 Score: 176.792 bits (447), Expect = 1.333e-51
Identity = 92/186 (49.46%), Postives = 122/186 (65.59%), Query Frame = 0
Query:   13 FPQDVAASGGYWLLAAGQEVYADKASIVGSVGVVSGGFGLHKLLEHHGIERRLHTAGTSKARLDPFLPARAEDVAYLRDTLAEIHEVFKAHVRARRGAKISGHESTIFSGDFFTGARGVELGLVDAIGSLQSVSKEKLGEKVRINYLNARPRFPFLPGLGTGTGDGSRMSWSAHLADAILESAEER 198
            F +DVAASGGYWL  A  E+ AD  SIVGS+GVVS GFG   L+E  G++RR+HT+G +KA LDPF P R EDVA+L+    E+HE FKA VR RR +++   E  +F+G F+TGAR +ELGL+D  G +++  +E+ GEKV I  +N     P  PGLG   G  +R      LAD + ++A ER
Sbjct:   89 FVEDVAASGGYWLACAADEITADACSIVGSIGVVSAGFGFTGLIERLGVDRRVHTSGAAKAMLDPFRPEREEDVAHLKSIQTEMHEAFKAWVRDRRASRLKAAEDDLFTGAFWTGARALELGLIDRTGDMRATLRERFGEKVDIRLINP----PRGPGLGRFIGLDAR-----SLADGVADAASER 265          
BLAST of EWM29816.1 vs. NCBI_GenBank
Match: gi|780563064|ref|WP_045584111.1| (S49 family peptidase [Azospirillum thiophilum] >gi|778293610|gb|KJR62827.1| peptidase S49 [Azospirillum thiophilum] >gi|933523208|gb|ALG73434.1| peptidase S49 [Azospirillum thiophilum])

HSP 1 Score: 176.407 bits (446), Expect = 3.467e-51
Identity = 85/148 (57.43%), Postives = 110/148 (74.32%), Query Frame = 0
Query:   13 FPQDVAASGGYWLLAAGQEVYADKASIVGSVGVVSGGFGLHKLLEHHGIERRLHTAGTSKARLDPFLPARAEDVAYLRDTLAEIHEVFKAHVRARRGAKISGHESTIFSGDFFTGARGVELGLVDAIGSLQSVSKEKLGEKVRINYLN 160
            F +D AASGGYWL  A  E++AD++SIVGS+GVVS GFGLH L+E HGIERRL+TAG  K  LDPF P R + VA+L+   A+IHE FKA VRARRGA+++G E  +FSG F+ G R + LGL+D +G L+SV + + GEKVR+  + 
Sbjct:   97 FCEDAAASGGYWLACAADEIWADESSIVGSIGVVSSGFGLHGLIERHGIERRLYTAGDKKVLLDPFSPEREDGVAHLKALQADIHEAFKAMVRARRGARLTGPEEELFSGSFWAGRRALALGLIDGLGDLRSVMRGRFGEKVRLRVVE 244          
BLAST of EWM29816.1 vs. NCBI_GenBank
Match: gi|1064020345|gb|ODT27832.1| (peptidase S49 [Hyphomicrobium sp. SCN 65-11])

HSP 1 Score: 174.866 bits (442), Expect = 4.803e-51
Identity = 96/205 (46.83%), Postives = 134/205 (65.37%), Query Frame = 0
Query:   12 IFPQDVAASGGYWLLAAGQEVYADKASIVGSVGVVSGGFGLHKLLEHHGIERRLHTAGTSKARLDPFLPARAEDVAYLRDTLAEIHEVFKAHVRARRGAKISGHESTIFSGDFFTGARGVELGLVDAIGSLQSVSKEKLGEKVRINYL-----NARPRFPFLPGLG-TGTGDGSRMSWSAHLADAILESAEERIEERLWRSRVGL 210
            +F +DVAASGGY+L  AG E+YAD +SIVGS+GVVS GFG  K +E  GI+RR++TAGTSKA LDPF P ++ED+A LR    +IHE F   V+ RRG ++SG E  +FSG F+TG++ +E GL+D I  +++  +E  G+K+R+  +         RF  +PG G +G  D +  +WSA L   ++ + E R    LW SR GL
Sbjct:   64 VFCEDVAASGGYFLAIAGDEIYADPSSIVGSIGVVSAGFGFDKAIEKLGIDRRVYTAGTSKAILDPFQPEKSEDIARLRALQKDIHETFIGLVKERRGIRLSGAEDELFSGAFWTGSKALEFGLIDGIADVRTRMREVHGDKIRLRVIPMGGGGLLARFRRVPGFGMSGASDTAPTTWSAALPAEVISALETRA---LW-SRFGL 264          
The following BLAST results are available for this feature:
BLAST of EWM29816.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112397|gb|EWM29816.1|3.710e-150100.00family s49 [Nannochloropsis gaditana][more]
gi|757149963|ref|WP_042704160.1|2.221e-5347.50S49 family peptidase [Azospirillum sp. B506][more]
gi|502740820|ref|WP_012975804.1|6.007e-5346.50S49 family peptidase [Azospirillum lipoferum] >gi|... [more]
gi|916723478|ref|WP_051330569.1|1.025e-5252.94S49 family peptidase [Niveispirillum irakense][more]
gi|1184513580|ref|WP_085083916.1|1.734e-5252.30S49 family peptidase [Azospirillum oryzae] >gi|118... [more]
gi|739591881|ref|WP_037449478.1|5.155e-5247.76S49 family peptidase [Skermanella stibiiresistens][more]
gi|587642300|gb|EWY41311.1|5.912e-5247.76peptidase S49 [Skermanella stibiiresistens SB22][more]
gi|930063831|ref|WP_054165973.1|1.333e-5149.46S49 family peptidase [alpha proteobacterium AAP38]... [more]
gi|780563064|ref|WP_045584111.1|3.467e-5157.43S49 family peptidase [Azospirillum thiophilum] >gi... [more]
gi|1064020345|gb|ODT27832.1|4.803e-5146.83peptidase S49 [Hyphomicrobium sp. SCN 65-11][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna869rna869Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications