EWM21986.1, cds8689 (CDS) Nannochloropsis gaditana

Overview
NameEWM21986.1
Unique Namecds8689
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:651251..651253 +
Alignment locationKK037249.1:651503..651613 +
Alignment locationKK037249.1:651794..651880 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21986.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100745g1.10544.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:651251..651253 +
KK037249.1supercontigKK037249.1:651503..651613 +
KK037249.1supercontigKK037249.1:651794..651880 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21986.1 vs. NCBI_GenBank
Match: gi|585102370|gb|EWM21986.1| (hypothetical protein Naga_100745g1 [Nannochloropsis gaditana])

HSP 1 Score: 137.502 bits (345), Expect = 2.446e-41
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 
Query:    1 MHPAGSCRVAKLFQPSFRHLFAFCLYPSDERRHEQGSQPAHHPPYETLRRQEHSDRCPSEDAAGIY 66
            MHPAGSCRVAKLFQPSFRHLFAFCLYPSDERRHEQGSQPAHHPPYETLRRQEHSDRCPSEDAAGIY
Sbjct:    1 MHPAGSCRVAKLFQPSFRHLFAFCLYPSDERRHEQGSQPAHHPPYETLRRQEHSDRCPSEDAAGIY 66
The following BLAST results are available for this feature:
BLAST of EWM21986.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102370|gb|EWM21986.1|2.446e-41100.00hypothetical protein Naga_100745g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8718rna8718Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications