EWM21988.1, cds8685 (CDS) Nannochloropsis gaditana

Overview
NameEWM21988.1
Unique Namecds8685
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:644362..644675 -
Alignment locationKK037249.1:644307..644320 -
Alignment locationKK037249.1:644109..644251 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21988.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101706g1.9461.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:644362..644675 -
KK037249.1supercontigKK037249.1:644307..644320 -
KK037249.1supercontigKK037249.1:644109..644251 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21988.1 vs. NCBI_GenBank
Match: gi|585102373|gb|EWM21988.1| (hypothetical protein Naga_101706g1 [Nannochloropsis gaditana])

HSP 1 Score: 318.931 bits (816), Expect = 2.985e-110
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 
Query:    1 MRTHFGGCRCPVTPTSAQRSTSKLIRSPPYHLVFSGEIDRRNATYLTVLEVEIARAAAKYPCKFWQWCLSSLPAVVSSLQASSTWRGEQGKTNPTQTRVFARRTSTRRFSRTLWKLETFWVNNTRWRPIIKHSGCVVLPKTSKSGAVGRLLAVKQA 156
            MRTHFGGCRCPVTPTSAQRSTSKLIRSPPYHLVFSGEIDRRNATYLTVLEVEIARAAAKYPCKFWQWCLSSLPAVVSSLQASSTWRGEQGKTNPTQTRVFARRTSTRRFSRTLWKLETFWVNNTRWRPIIKHSGCVVLPKTSKSGAVGRLLAVKQA
Sbjct:    1 MRTHFGGCRCPVTPTSAQRSTSKLIRSPPYHLVFSGEIDRRNATYLTVLEVEIARAAAKYPCKFWQWCLSSLPAVVSSLQASSTWRGEQGKTNPTQTRVFARRTSTRRFSRTLWKLETFWVNNTRWRPIIKHSGCVVLPKTSKSGAVGRLLAVKQA 156
The following BLAST results are available for this feature:
BLAST of EWM21988.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102373|gb|EWM21988.1|2.985e-110100.00hypothetical protein Naga_101706g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8714rna8714Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications