EWM21990.1, cds8683 (CDS) Nannochloropsis gaditana

Overview
NameEWM21990.1
Unique Namecds8683
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:640752..640978 +
Alignment locationKK037249.1:641096..641473 +
Alignment locationKK037249.1:641736..641764 +
Alignment locationKK037249.1:641839..641933 +

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Properties
Property NameValue
Protein idEWM21990.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100670g1.7113.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:640752..640978 +
KK037249.1supercontigKK037249.1:641096..641473 +
KK037249.1supercontigKK037249.1:641736..641764 +
KK037249.1supercontigKK037249.1:641839..641933 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM21990.1 vs. NCBI_GenBank
Match: gi|585102379|gb|EWM21990.1| (hypothetical protein Naga_100670g1 [Nannochloropsis gaditana])

HSP 1 Score: 452.595 bits (1163), Expect = 2.816e-160
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0 
Query:    1 MDAESTKMGSSATSFSPSLPPSLSTSSLPEADGEIATEQNKTTDHAKLTFQATVVPAKFATASTKTTETSAAGSSSPKKPSAAVNTTSSPPPSIGLPTSSPYPSSAAVSPSCPRPTSSPARSSTSTAASPSLSPAHSGMVASPSPPSAVSSSSPSSSPSSSSSLPDEKTLVRWCQRVVANDMGLKNESLLDDDFYFIGPFDGPIGKTAFLEGRSLPPSLPPSLPPSLPPPPLRSSLLPTSPV 242
            MDAESTKMGSSATSFSPSLPPSLSTSSLPEADGEIATEQNKTTDHAKLTFQATVVPAKFATASTKTTETSAAGSSSPKKPSAAVNTTSSPPPSIGLPTSSPYPSSAAVSPSCPRPTSSPARSSTSTAASPSLSPAHSGMVASPSPPSAVSSSSPSSSPSSSSSLPDEKTLVRWCQRVVANDMGLKNESLLDDDFYFIGPFDGPIGKTAFLEGRSLPPSLPPSLPPSLPPPPLRSSLLPTSPV
Sbjct:    1 MDAESTKMGSSATSFSPSLPPSLSTSSLPEADGEIATEQNKTTDHAKLTFQATVVPAKFATASTKTTETSAAGSSSPKKPSAAVNTTSSPPPSIGLPTSSPYPSSAAVSPSCPRPTSSPARSSTSTAASPSLSPAHSGMVASPSPPSAVSSSSPSSSPSSSSSLPDEKTLVRWCQRVVANDMGLKNESLLDDDFYFIGPFDGPIGKTAFLEGRSLPPSLPPSLPPSLPPPPLRSSLLPTSPV 242
[Close]
BLAST of EWM21990.1 vs. NCBI_GenBank
Match: gi|553186859|ref|XP_005854502.1| (hypothetical protein NGA_0238200 [Nannochloropsis gaditana CCMP526] >gi|422294556|gb|EKU21856.1| hypothetical protein NGA_0238200 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 374.015 bits (959), Expect = 8.358e-130
Identity = 199/202 (98.51%), Postives = 199/202 (98.51%), Query Frame = 0 
Query:    1 MDAESTKMGSSATSFSPSLPPSLSTSSLPEADGEIATEQNKTTDHAKLTFQATVVPAKFATASTKTTETSAAGSSSPKKPSAAVNTTSSPPPSIGLPTSSPYPSSAAVSPSCPRPTSSPARSSTSTAASPSLSPAHSGMVASPSPPSAVSSSSPSSSPSSSSSLPDEKTLVRWCQRVVANDMGLKNESLLDDDFYFIGPFDG 202
            MDAESTKMGSSA SFSPSLPPSLSTSSLPEADGEIATEQNKTTDHAKLTFQATVVPAKFATASTKTTETSAAGSSSPKKPSAAVNTTSSPPPSI LPTSSPYPSSAAVSPSCPRPTSSPARSSTSTAASPSLSPAHSGMVASPSPPSAVSSSS SSSPSSSSSLPDEKTLVRWCQRVVANDMGLKNESLLDDDFYFIGPFDG
Sbjct:    3 MDAESTKMGSSAASFSPSLPPSLSTSSLPEADGEIATEQNKTTDHAKLTFQATVVPAKFATASTKTTETSAAGSSSPKKPSAAVNTTSSPPPSIRLPTSSPYPSSAAVSPSCPRPTSSPARSSTSTAASPSLSPAHSGMVASPSPPSAVSSSSSSSSPSSSSSLPDEKTLVRWCQRVVANDMGLKNESLLDDDFYFIGPFDG 204
The following BLAST results are available for this feature:
BLAST of EWM21990.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585102379|gb|EWM21990.1|2.816e-160100.00hypothetical protein Naga_100670g1 [Nannochloropsi... [more]
gi|553186859|ref|XP_005854502.1|8.358e-13098.51hypothetical protein NGA_0238200 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8712rna8712Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications