EWM21994.1, cds8682 (CDS) Nannochloropsis gaditana

Overview
NameEWM21994.1
Unique Namecds8682
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:639649..639651 -
Alignment locationKK037249.1:639327..639464 -
Alignment locationKK037249.1:638885..639055 -
Alignment locationKK037249.1:638667..638723 -
Alignment locationKK037249.1:638445..638537 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21994.1
Productnudix hydrolase
Orig transcript idgnl|cribi|Naga_100670g2.7117.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:639649..639651 -
KK037249.1supercontigKK037249.1:639327..639464 -
KK037249.1supercontigKK037249.1:638885..639055 -
KK037249.1supercontigKK037249.1:638667..638723 -
KK037249.1supercontigKK037249.1:638445..638537 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR000086NUDIX_hydrolase_dom
IPR015797NUDIX_hydrolase_dom-like
Homology
BLAST of EWM21994.1 vs. NCBI_GenBank
Match: gi|585102382|gb|EWM21993.1| (nudix hydrolase [Nannochloropsis gaditana])

HSP 1 Score: 319.316 bits (817), Expect = 3.788e-110
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
Query:    1 MRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGEKSNGN 153
            MRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGEKSNGN
Sbjct:   27 MRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGEKSNGN 179          
BLAST of EWM21994.1 vs. NCBI_GenBank
Match: gi|585102383|gb|EWM21994.1| (nudix hydrolase [Nannochloropsis gaditana])

HSP 1 Score: 317.39 bits (812), Expect = 1.058e-109
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
Query:    1 MRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGEKSNGN 153
            MRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGEKSNGN
Sbjct:    1 MRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGEKSNGN 153          
BLAST of EWM21994.1 vs. NCBI_GenBank
Match: gi|553186865|ref|XP_005854504.1| (nudix hydrolase [Nannochloropsis gaditana CCMP526] >gi|422294558|gb|EKU21858.1| nudix hydrolase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 315.849 bits (808), Expect = 3.500e-109
Identity = 152/153 (99.35%), Postives = 153/153 (100.00%), Query Frame = 0
Query:    1 MRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGEKSNGN 153
            MRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDE+IRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGEKSNGN
Sbjct:    1 MRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDEQIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGEKSNGN 153          
BLAST of EWM21994.1 vs. NCBI_GenBank
Match: gi|698777240|ref|XP_009821664.1| (hypothetical protein H257_00608 [Aphanomyces astaci] >gi|574123789|gb|ETV89264.1| hypothetical protein H257_00608 [Aphanomyces astaci])

HSP 1 Score: 142.51 bits (358), Expect = 3.593e-40
Identity = 71/141 (50.35%), Postives = 95/141 (67.38%), Query Frame = 0
Query:    1 MRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLD 141
            MR   L HR+TYI  RNS G++YVQ+RT++KDYCPG+ + +AGGVV AGE+Y +NA RE +EE+G+        + TF YQD    V+G  +E V+DGALTLQ EEV  V  M+  ++  R    D+FTPD L+A R YL+
Sbjct:   46 MRVFSLPHRATYIVIRNSAGDFYVQRRTLIKDYCPGFLDPMAGGVVQAGESYEDNALREVKEEMGV-SGVPLTFVCTFFYQDASTVVWGGMFECVYDGALTLQPEEVSQVLVMSASDIIAR---ADEFTPDGLFAMRLYLE 182          
BLAST of EWM21994.1 vs. NCBI_GenBank
Match: gi|568029513|gb|ETM03436.1| (hypothetical protein, variant 1 [Phytophthora parasitica] >gi|570998885|gb|ETP55004.1| hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 138.658 bits (348), Expect = 3.006e-39
Identity = 71/148 (47.97%), Postives = 102/148 (68.92%), Query Frame = 0
Query:    1 MRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGE 148
            MR   L HR++YI  +NS G+YYVQ+RTM+KDYCPG  + +AGGVV  GE    NA+REAEEE+G+  +   ++L TF Y D+R RV+G  ++  +DG L LQ+EEV+ V  MT++E+  R    ++FTPD ++A  KYL F+  +G+
Sbjct:    1 MRAFNLPHRASYIVIKNSSGKYYVQRRTMIKDYCPGMLDPMAGGVVQYGEPMDVNAEREAEEEMGV-KNTPLRYLTTFYYGDDRSRVWGGLFDCTFDGPLVLQEEEVDEVLTMTVDEILDR---RNEFTPDGIFAFEKYLKFIEAEGK 144          
BLAST of EWM21994.1 vs. NCBI_GenBank
Match: gi|568029512|gb|ETM03435.1| (hypothetical protein L917_00357 [Phytophthora parasitica] >gi|570998884|gb|ETP55003.1| hypothetical protein F442_00401 [Phytophthora parasitica P10297])

HSP 1 Score: 139.428 bits (350), Expect = 3.186e-39
Identity = 71/148 (47.97%), Postives = 102/148 (68.92%), Query Frame = 0
Query:    1 MRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGE 148
            MR   L HR++YI  +NS G+YYVQ+RTM+KDYCPG  + +AGGVV  GE    NA+REAEEE+G+  +   ++L TF Y D+R RV+G  ++  +DG L LQ+EEV+ V  MT++E+  R    ++FTPD ++A  KYL F+  +G+
Sbjct:   27 MRAFNLPHRASYIVIKNSSGKYYVQRRTMIKDYCPGMLDPMAGGVVQYGEPMDVNAEREAEEEMGV-KNTPLRYLTTFYYGDDRSRVWGGLFDCTFDGPLVLQEEEVDEVLTMTVDEILDR---RNEFTPDGIFAFEKYLKFIEAEGK 170          
BLAST of EWM21994.1 vs. NCBI_GenBank
Match: gi|568060153|gb|ETM56693.1| (hypothetical protein L914_00380 [Phytophthora parasitica] >gi|570962076|gb|ETP27055.1| hypothetical protein F441_00405 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 139.428 bits (350), Expect = 3.515e-39
Identity = 72/148 (48.65%), Postives = 101/148 (68.24%), Query Frame = 0
Query:    1 MRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGE 148
            MR   L HR++YI  +NS G+YYVQ+RTM+KDYCPG  + +AGGVV  GE    NA+REAEEE+GI  +   ++L TF Y D+R RV+G  ++  +DG L LQ+EEV+ V  MT +E+  R    ++FTPD ++A  KYL F+  +G+
Sbjct:   27 MRAFNLPHRASYIVIKNSSGKYYVQRRTMIKDYCPGMLDPMAGGVVQYGEPMDVNAEREAEEEMGI-KNTPLRYLTTFYYGDDRSRVWGGLFDCTFDGPLVLQEEEVDEVLTMTADEILDR---RNEFTPDGIFAFEKYLKFIEAEGK 170          
BLAST of EWM21994.1 vs. NCBI_GenBank
Match: gi|568060154|gb|ETM56694.1| (hypothetical protein, variant 1 [Phytophthora parasitica] >gi|570962077|gb|ETP27056.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 138.272 bits (347), Expect = 3.948e-39
Identity = 72/148 (48.65%), Postives = 101/148 (68.24%), Query Frame = 0
Query:    1 MRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGE 148
            MR   L HR++YI  +NS G+YYVQ+RTM+KDYCPG  + +AGGVV  GE    NA+REAEEE+GI  +   ++L TF Y D+R RV+G  ++  +DG L LQ+EEV+ V  MT +E+  R    ++FTPD ++A  KYL F+  +G+
Sbjct:    1 MRAFNLPHRASYIVIKNSSGKYYVQRRTMIKDYCPGMLDPMAGGVVQYGEPMDVNAEREAEEEMGI-KNTPLRYLTTFYYGDDRSRVWGGLFDCTFDGPLVLQEEEVDEVLTMTADEILDR---RNEFTPDGIFAFEKYLKFIEAEGK 144          
BLAST of EWM21994.1 vs. NCBI_GenBank
Match: gi|567972049|gb|ETK97042.1| (hypothetical protein L915_00376 [Phytophthora parasitica] >gi|568000373|gb|ETL50393.1| hypothetical protein L916_00377 [Phytophthora parasitica])

HSP 1 Score: 138.658 bits (348), Expect = 6.981e-39
Identity = 71/148 (47.97%), Postives = 101/148 (68.24%), Query Frame = 0
Query:    1 MRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGE 148
            MR   L HR++YI  +NS G+YYVQ+RTM+KDYCPG  + +AGGVV  GE    NA+REAEEE+G+  +   ++L TF Y D+R RV+G  ++  +DG L LQ+EEV+ V  MT +E+  R    ++FTPD ++A  KYL F+  +G+
Sbjct:   27 MRAFNLPHRASYIVIKNSSGKYYVQRRTMIKDYCPGMLDPMAGGVVQYGEPMDVNAEREAEEEMGV-KNTPLRYLTTFYYGDDRSRVWGGLFDCTFDGPLVLQEEEVDEVLTMTADEILDR---RNEFTPDGIFAFEKYLKFIEAEGK 170          
BLAST of EWM21994.1 vs. NCBI_GenBank
Match: gi|675162169|ref|XP_008889969.1| (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|567972050|gb|ETK97043.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568000374|gb|ETL50394.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568109214|gb|ETN23821.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310])

HSP 1 Score: 137.887 bits (346), Expect = 7.039e-39
Identity = 71/148 (47.97%), Postives = 101/148 (68.24%), Query Frame = 0
Query:    1 MRKERLLHRSTYIFARNSQGEYYVQKRTMLKDYCPGYYEVVAGGVVGAGETYAENADREAEEELGIPPSAGKKHLFTFLYQDERIRVFGDAWEVVWDGALTLQKEEVESVHPMTLEEVFIRVEAGDKFTPDSLYATRKYLDFLREKGE 148
            MR   L HR++YI  +NS G+YYVQ+RTM+KDYCPG  + +AGGVV  GE    NA+REAEEE+G+  +   ++L TF Y D+R RV+G  ++  +DG L LQ+EEV+ V  MT +E+  R    ++FTPD ++A  KYL F+  +G+
Sbjct:    1 MRAFNLPHRASYIVIKNSSGKYYVQRRTMIKDYCPGMLDPMAGGVVQYGEPMDVNAEREAEEEMGV-KNTPLRYLTTFYYGDDRSRVWGGLFDCTFDGPLVLQEEEVDEVLTMTADEILDR---RNEFTPDGIFAFEKYLKFIEAEGK 144          
The following BLAST results are available for this feature:
BLAST of EWM21994.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102382|gb|EWM21993.1|3.788e-110100.00nudix hydrolase [Nannochloropsis gaditana][more]
gi|585102383|gb|EWM21994.1|1.058e-109100.00nudix hydrolase [Nannochloropsis gaditana][more]
gi|553186865|ref|XP_005854504.1|3.500e-10999.35nudix hydrolase [Nannochloropsis gaditana CCMP526]... [more]
gi|698777240|ref|XP_009821664.1|3.593e-4050.35hypothetical protein H257_00608 [Aphanomyces astac... [more]
gi|568029513|gb|ETM03436.1|3.006e-3947.97hypothetical protein, variant 1 [Phytophthora para... [more]
gi|568029512|gb|ETM03435.1|3.186e-3947.97hypothetical protein L917_00357 [Phytophthora para... [more]
gi|568060153|gb|ETM56693.1|3.515e-3948.65hypothetical protein L914_00380 [Phytophthora para... [more]
gi|568060154|gb|ETM56694.1|3.948e-3948.65hypothetical protein, variant 1 [Phytophthora para... [more]
gi|567972049|gb|ETK97042.1|6.981e-3947.97hypothetical protein L915_00376 [Phytophthora para... [more]
gi|675162169|ref|XP_008889969.1|7.039e-3947.97hypothetical protein, variant 1 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8711rna8711Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications