EWM21998.1, cds8675 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21998.1 vs. NCBI_GenBank
Match: gi|585102390|gb|EWM21998.1| (type peptidyl-prolyl cis-trans isomerase [Nannochloropsis gaditana]) HSP 1 Score: 383.259 bits (983), Expect = 9.600e-135 Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0
Query: 1 MPRGPSDAVHAVVRQRAGGVETVLAVNCGFLVHSFMPFSAPHRHPLSFCLVLWMLISCSMRLRPSVAFTIRALRPKPKHHPGVPTFSIARVHPVKLTFLHTYRPATAGGTSVERTSWRSTAIRLMASTSTTPPDPRVKVRAAHILVKSEEEADALMAVLENGADFAELAMVESDCPSRKQGGDLGWFG 188
MPRGPSDAVHAVVRQRAGGVETVLAVNCGFLVHSFMPFSAPHRHPLSFCLVLWMLISCSMRLRPSVAFTIRALRPKPKHHPGVPTFSIARVHPVKLTFLHTYRPATAGGTSVERTSWRSTAIRLMASTSTTPPDPRVKVRAAHILVKSEEEADALMAVLENGADFAELAMVESDCPSRKQGGDLGWFG
Sbjct: 1 MPRGPSDAVHAVVRQRAGGVETVLAVNCGFLVHSFMPFSAPHRHPLSFCLVLWMLISCSMRLRPSVAFTIRALRPKPKHHPGVPTFSIARVHPVKLTFLHTYRPATAGGTSVERTSWRSTAIRLMASTSTTPPDPRVKVRAAHILVKSEEEADALMAVLENGADFAELAMVESDCPSRKQGGDLGWFG 188
BLAST of EWM21998.1 vs. NCBI_GenBank
Match: gi|1008853350|gb|KYK36045.1| (peptidylprolyl isomerase [Theionarchaea archaeon DG-70-1]) HSP 1 Score: 71.2478 bits (173), Expect = 4.894e-13 Identity = 31/51 (60.78%), Postives = 40/51 (78.43%), Query Frame = 0
Query: 138 KVRAAHILVKSEEEADALMAVLENGADFAELAMVESDCPSRKQGGDLGWFG 188
+V+A+HILVK EA+ ++ L+ GA FAELA S+CPSRK+GGDLGWFG
Sbjct: 3 QVKASHILVKKRSEAEKILEELKKGASFAELAKKHSECPSRKRGGDLGWFG 53
BLAST of EWM21998.1 vs. NCBI_GenBank
Match: gi|1085041192|gb|OGS44319.1| (peptidylprolyl isomerase [Euryarchaeota archaeon RBG_13_57_23]) HSP 1 Score: 69.707 bits (169), Expect = 2.093e-12 Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 0
Query: 138 KVRAAHILVKSEEEADALMAVLENGADFAELAMVESDCPSRKQGGDLGWFG 188
+V AAHILVKSE +A+ L+ + +G +F ELA SDCPS++ GGDLGWFG
Sbjct: 4 QVHAAHILVKSENQANELLGRINSGENFGELAKKYSDCPSKRSGGDLGWFG 54
BLAST of EWM21998.1 vs. NCBI_GenBank
Match: gi|1085056197|gb|OGS56740.1| (peptidylprolyl isomerase [Euryarchaeota archaeon RBG_19FT_COMBO_56_21]) HSP 1 Score: 68.9366 bits (167), Expect = 4.268e-12 Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = 0
Query: 138 KVRAAHILVKSEEEADALMAVLENGADFAELAMVESDCPSRKQGGDLGWFG 188
+V AAHILVK+E +A L+ + +G +F ELA SDCPS+K GGDLGWFG
Sbjct: 4 QVHAAHILVKTENQAKELLGRVNSGENFGELAKKYSDCPSKKSGGDLGWFG 54
BLAST of EWM21998.1 vs. NCBI_GenBank
Match: gi|998172808|gb|KXH72534.1| (peptidylprolyl isomerase [Candidatus Thorarchaeota archaeon SMTZ1-83]) HSP 1 Score: 68.5514 bits (166), Expect = 5.971e-12 Identity = 29/51 (56.86%), Postives = 38/51 (74.51%), Query Frame = 0
Query: 138 KVRAAHILVKSEEEADALMAVLENGADFAELAMVESDCPSRKQGGDLGWFG 188
K+RA+HILVK +A +++ + G DFA +A SDCPSRK+GGDLGWFG
Sbjct: 9 KIRASHILVKKHSQALEIISRIREGEDFASMAKQSSDCPSRKKGGDLGWFG 59
BLAST of EWM21998.1 vs. NCBI_GenBank
Match: gi|940130343|gb|KPX46846.1| (PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas ficuserectae]) HSP 1 Score: 68.1662 bits (165), Expect = 6.669e-12 Identity = 32/51 (62.75%), Postives = 37/51 (72.55%), Query Frame = 0
Query: 138 KVRAAHILVKSEEEADALMAVLENGADFAELAMVESDCPSRKQGGDLGWFG 188
K A HILV SEE+ + L A +E GADFAE+A V S CPS +QGGDLG FG
Sbjct: 3 KATARHILVSSEEKCNELKAQIEGGADFAEIAKVNSSCPSSRQGGDLGSFG 53
BLAST of EWM21998.1 vs. NCBI_GenBank
Match: gi|940028517|gb|KPW53502.1| (PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas caricapapayae] >gi|940282444|gb|KPY89064.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Pseudomonas syringae pv. tagetis]) HSP 1 Score: 68.5514 bits (166), Expect = 6.755e-12 Identity = 32/54 (59.26%), Postives = 37/54 (68.52%), Query Frame = 0
Query: 135 PRVKVRAAHILVKSEEEADALMAVLENGADFAELAMVESDCPSRKQGGDLGWFG 188
P K A HILV SEE+ + L A +E GADFAE+A S CPS +QGGDLG FG
Sbjct: 3 PMAKATARHILVSSEEKCNELKAQIEGGADFAEIAKANSSCPSSRQGGDLGSFG 56
BLAST of EWM21998.1 vs. NCBI_GenBank
Match: gi|503093320|ref|WP_013328145.1| (MULTISPECIES: peptidyl-prolyl cis-trans isomerase [Methanolacinia] >gi|307155586|gb|ADN34966.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Methanolacinia petrolearia DSM 11571]) HSP 1 Score: 68.1662 bits (165), Expect = 7.577e-12 Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 0
Query: 138 KVRAAHILVKSEEEADALMAVLENGADFAELAMVESDCPSRKQGGDLGWFG 188
KVRA+HILV SE+EA ++A L +G +F ELA S CPS ++GGDLGWFG
Sbjct: 4 KVRASHILVNSEKEAKDILAKLNSGENFEELAKKYSTCPSGRKGGDLGWFG 54
BLAST of EWM21998.1 vs. NCBI_GenBank
Match: gi|1172329306|ref|WP_080712584.1| (peptidylprolyl isomerase [Pseudomonas brassicacearum]) HSP 1 Score: 67.781 bits (164), Expect = 1.436e-11 Identity = 31/55 (56.36%), Postives = 38/55 (69.09%), Query Frame = 0
Query: 134 DPRVKVRAAHILVKSEEEADALMAVLENGADFAELAMVESDCPSRKQGGDLGWFG 188
DP K A HILV +E++ + L A +E GADFAE+A S CPS +QGGDLG FG
Sbjct: 16 DPMAKATARHILVATEDKCNELKAQIEGGADFAEVAKANSSCPSSRQGGDLGSFG 70
BLAST of EWM21998.1 vs. NCBI_GenBank
Match: gi|1008851608|gb|KYK34379.1| (peptidylprolyl isomerase [Theionarchaea archaeon DG-70]) HSP 1 Score: 67.3958 bits (163), Expect = 1.638e-11 Identity = 28/51 (54.90%), Postives = 40/51 (78.43%), Query Frame = 0
Query: 138 KVRAAHILVKSEEEADALMAVLENGADFAELAMVESDCPSRKQGGDLGWFG 188
+V+A+HILVK +A+ ++ L+ GA FA+LA S+CPS+K+GGDLGWFG
Sbjct: 3 QVKASHILVKKRSQAEKILEELKKGASFAKLAQEYSECPSKKRGGDLGWFG 53 The following BLAST results are available for this feature:
BLAST of EWM21998.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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