EWM29860.1, cds867 (CDS) Nannochloropsis gaditana

BLAST of EWM29860.1 vs. NCBI_GenBank
Match: gi|585112441|gb|EWM29860.1| (light-harvesting protein [Nannochloropsis gaditana])

HSP 1 Score: 352.829 bits (904), Expect = 5.173e-123
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0

Query:    1 MSASDMIGIDVETGGLFDPLGFSKDEQSLYKYRQVELKHGRVAMLACLGTLVQSYTHLPDDVFSNPRPLGALGQLLSERPLAILQIVIAITLIEVTSGKQDPELAPGQLGRFGEAFKPEGEAEMAAVQLKELKNGRLAMVAIIGQWVQELLTGQGPIEQITSGHISPFGDGQGLF 175
            MSASDMIGIDVETGGLFDPLGFSKDEQSLYKYRQVELKHGRVAMLACLGTLVQSYTHLPDDVFSNPRPLGALGQLLSERPLAILQIVIAITLIEVTSGKQDPELAPGQLGRFGEAFKPEGEAEMAAVQLKELKNGRLAMVAIIGQWVQELLTGQGPIEQITSGHISPFGDGQGLF
Sbjct:    1 MSASDMIGIDVETGGLFDPLGFSKDEQSLYKYRQVELKHGRVAMLACLGTLVQSYTHLPDDVFSNPRPLGALGQLLSERPLAILQIVIAITLIEVTSGKQDPELAPGQLGRFGEAFKPEGEAEMAAVQLKELKNGRLAMVAIIGQWVQELLTGQGPIEQITSGHISPFGDGQGLF 175          

BLAST of EWM29860.1 vs. NCBI_GenBank
Match: gi|585113162|gb|EWM30498.1| (light-harvesting protein [Nannochloropsis gaditana])

HSP 1 Score: 244.588 bits (623), Expect = 7.566e-80
Identity = 122/176 (69.32%), Postives = 142/176 (80.68%), Query Frame = 0

Query:    1 MSASDMIGIDVETGGLFDPLGFSKDEQSLYKYRQVELKHGRVAMLACLGTLVQSYTHLPDDVFSNPRPLGALGQLLSERPLAILQIVIAITLIEVTSGKQD-PELAPGQLGRFGEAFKPEGEAEMAAVQLKELKNGRLAMVAIIGQWVQELLTGQGPIEQITSGHISPFGDGQGLF 175
            M+ ++MIG DVET G+FDPLG +KDE SLY+ R +ELKHGRVAMLACLGTLVQS+ HLPD+VFSNPRPL AL Q+ SERP+A  QI +AI  IE+T GKQD    APG +G FG AF P+   + AA+QLKELKNGRLAM+AIIGQ+VQE LTGQGPIEQ+  GH SPFGDGQG F
Sbjct:   32 MAVNEMIGSDVETNGVFDPLGLAKDEASLYRSRLIELKHGRVAMLACLGTLVQSFYHLPDEVFSNPRPLAALAQVYSERPVAFWQIFLAIGAIELTIGKQDTANRAPGDVG-FGAAFIPDDAEDFAALQLKELKNGRLAMMAIIGQFVQEKLTGQGPIEQLLEGHFSPFGDGQGAF 206          

BLAST of EWM29860.1 vs. NCBI_GenBank
Match: gi|585110528|gb|EWM28183.1| (light harvesting complex protein [Nannochloropsis gaditana])

HSP 1 Score: 217.238 bits (552), Expect = 6.107e-69
Identity = 106/174 (60.92%), Postives = 130/174 (74.71%), Query Frame = 0

Query:    2 SASDMIGIDVETGGLFDPLGFSKDEQSLYKYRQVELKHGRVAMLACLGTLVQSYTHLPDDVFSNPRPLGALGQLLSERPLAILQIVIAITLIEVTSGKQDPELAPGQLGRFGEAFKPEGEAEMAAVQLKELKNGRLAMVAIIGQWVQELLTGQGPIEQITSGHISPFGDGQGLF 175
            S SD+IG D ETGG++DPLG S++E SL KYR+ ELKHGRVAM A LG  VQ   HLPD VFSNPRPL AL Q+  +RP AI QI++ + +IE T G+Q  + APG L  FG +F P+ E E   +QLKELKNGRLAMVA +G  +QE LTGQGP+EQ+ +GH++PFGDGQG F
Sbjct:   38 SVSDLIGADTETGGIWDPLGLSQNEGSLRKYRECELKHGRVAMAAMLGIFVQGLYHLPDPVFSNPRPLAALQQVYEQRPEAIWQIIVGLGVIEFTGGRQKEDRAPGDL-NFGSSFIPKSEKEFEELQLKELKNGRLAMVASMGALLQEYLTGQGPVEQVLAGHLNPFGDGQGFF 210          

BLAST of EWM29860.1 vs. NCBI_GenBank
Match: gi|873230095|emb|CEM11606.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 204.527 bits (519), Expect = 6.730e-64
Identity = 104/176 (59.09%), Postives = 127/176 (72.16%), Query Frame = 0

Query:    1 MSASDMI-GIDVETGGLFDPLGFSKDEQSLYKYRQVELKHGRVAMLACLGTLVQSYTHLPDDVFSNPRPLGALGQLLSERPLAILQIVIAITLIEVTSGKQDPELAPGQLGRFGEAFKPEGEAEMAAVQLKELKNGRLAMVAIIGQWVQELLTGQGPIEQITSGHISPFGDGQGLF 175
            M A D + G DVETGG++DPLG S++E +L  YR  ELKHGRV M+A LG +VQ+Y  LPD VF+NPRPL A+ Q+  +RP AI+QI++AI   E+   +Q PE  PG L  FG AF+P  EA+   +Q KELKNGRLAM+ I G  VQE LTGQGP+EQI  GHISPFGDGQG F
Sbjct:   40 MGAVDQLAGADVETGGVWDPLGLSQNEDALSLYRAAELKHGRVCMMAVLGVIVQTYFQLPDPVFNNPRPLEAIVQVWQQRPEAIIQILLAIGATELYFLRQSPEDPPGSLQNFGAAFRPRDEAKFEELQRKELKNGRLAMIGISGMLVQEALTGQGPLEQIQVGHISPFGDGQGYF 215          

BLAST of EWM29860.1 vs. NCBI_GenBank
Match: gi|553181527|ref|XP_005853581.1| (light harvesting complex protein [Nannochloropsis gaditana CCMP526] >gi|422295478|gb|EKU22777.1| light harvesting complex protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 192.586 bits (488), Expect = 2.399e-59
Identity = 96/159 (60.38%), Postives = 117/159 (73.58%), Query Frame = 0

Query:    2 SASDMIGIDVETGGLFDPLGFSKDEQSLYKYRQVELKHGRVAMLACLGTLVQSYTHLPDDVFSNPRPLGALGQLLSERPLAILQIVIAITLIEVTSGKQDPELAPGQLGRFGEAFKPEGEAEMAAVQLKELKNGRLAMVAIIGQWVQELLTGQGPIEQI 160
            S SD+IG D ETGG++DPLG S++E SL KYR+ ELKHGRVAM A LG  VQ   HLPD VFSNPRPL AL Q+  +RP AI QI++ + +IE T G+Q  + APG L  FG +F P+ E E   +QLKELKNGRLAMVA +G  +QE LTGQGP+EQ+
Sbjct:   38 SVSDLIGADTETGGIWDPLGLSQNEGSLRKYRECELKHGRVAMAAMLGIFVQGLYHLPDPVFSNPRPLAALQQVYEQRPEAIWQIIVGLGVIEFTGGRQKEDRAPGDL-NFGSSFIPKSEKEFEELQLKELKNGRLAMVASMGALLQEYLTGQGPVEQV 195          

BLAST of EWM29860.1 vs. NCBI_GenBank
Match: gi|873224040|emb|CEM27246.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 185.652 bits (470), Expect = 2.073e-56
Identity = 106/170 (62.35%), Postives = 124/170 (72.94%), Query Frame = 0

Query:    1 MSASDMIGIDVETGGLFDPLGFSKDEQSLYKYRQVELKHGRVAMLACLGTLVQSY-THLPDDVFSNPRPLGALGQLLSERPLAILQIVIAITLIEVTSGKQDPE-LAPGQLGRFGEAFKPEGEAEMAAVQLKELKNGRLAMVAIIGQWVQELLTGQGPIEQITSGHISPF 168
            MS  +MIG DVETGG+FDPL FS+DE SL++ R VELKHGR+AMLACLG  VQS   HLPD VFS PRPL AL ++L+ERP A  QIV AI  IE+  G+QD E  APG LG FG++FK     E    QL+ELKNGRLAM+ I+G  VQE LTGQ   EQI SG+I+PF
Sbjct:   44 MSVEEMIGADVETGGVFDPLKFSEDEASLFRRRAVELKHGRIAMLACLGYFVQSAGVHLPDPVFSEPRPLSALTKVLTERPWAAAQIVAAIAAIELGPGRQDYENKAPGDLGYFGDSFKNSDPEEFRKDQLRELKNGRLAMIGIMGMMVQEGLTGQSVWEQIGSGNINPF 213          

BLAST of EWM29860.1 vs. NCBI_GenBank
Match: gi|290766160|gb|ADD60136.1| (light harvesting complex protein 3, partial [Vaucheria litorea] >gi|290766162|gb|ADD60137.1| light harvesting complex protein 3, partial [Elysia chlorotica])

HSP 1 Score: 179.489 bits (454), Expect = 6.355e-55
Identity = 92/146 (63.01%), Postives = 110/146 (75.34%), Query Frame = 0

Query:   17 FDPLGFSKDEQSLYKYRQVELKHGRVAMLACLGTLVQSYTHLPDDVFSNPRPLGALGQLLSERPLAILQIVIAITLIEVTSGKQDPE-LAPGQLGRFGEAFKPEGEAEMAAVQLKELKNGRLAMVAIIGQWVQELLTGQGPIEQIT 161
            +DPLGFSKDE SL++ R VELKHGR+ MLA LG  VQ+  HLPD VFSNPRP+GAL Q+ +ERP+AI QI++AI  IE++ GKQD E  APG LG FG+  KP    E   VQL+ELKNGRLAM+AI+G  VQE LT QGP+EQ  
Sbjct:    1 WDPLGFSKDEASLFRRRVVELKHGRICMLATLGVFVQNSIHLPDPVFSNPRPIGALLQVFAERPIAIWQIILAIGAIELSIGKQDYENKAPGDLGSFGDFAKPSDPIEWEKVQLRELKNGRLAMMAIMGMLVQEGLTKQGPLEQFA 146          

BLAST of EWM29860.1 vs. NCBI_GenBank
Match: gi|298708216|emb|CBJ30555.1| (Light harvesting complex protein [Ectocarpus siliculosus])

HSP 1 Score: 176.792 bits (447), Expect = 6.643e-53
Identity = 102/179 (56.98%), Postives = 128/179 (71.51%), Query Frame = 0

Query:    1 MSASDMIGIDVETGGLFDPLGFSKDEQSLYKYRQVELKHGRVAMLACLGTLVQSYTHLPDDVFSNPRPLGALGQLLSERPLAI-LQIVIAITLIEVTSGKQDPE-LAPGQLGRFGEAFKP--EGEAEMAAVQLKELKNGRLAMVAIIGQWVQELLTGQGPIEQITSGHISPFGDGQGLF 175
            M+ +DM+G DVET G+FDPLG+ KD+ SL++ R VELKHGRVAMLA  G L     H   D   +P  L ALG+L    PLA  +QI+ AI ++E+T GKQD E  APG+LG FG+A+ P  +     + +QLKELKNGRLAM+AI+G+ VQE LTGQ  IEQ+TSGH+SPFGDGQG F
Sbjct:   43 MAVNDMLGADVETDGVFDPLGYGKDDASLFRRRAVELKHGRVAMLAVTGYLFAEQWHPLYDGKLSPG-LKALGEL----PLAAWVQILGAIAVVELTVGKQDYENKAPGELGNFGQAWNPYPDNPVAFSKLQLKELKNGRLAMLAIMGEMVQEKLTGQTAIEQLTSGHLSPFGDGQGAF 216          

BLAST of EWM29860.1 vs. NCBI_GenBank
Match: gi|298712459|emb|CBJ33233.1| (Light harvesting complex protein. Probably a pseudogene (no EST support, no targeting) [Ectocarpus siliculosus])

HSP 1 Score: 170.244 bits (430), Expect = 6.288e-51
Identity = 94/173 (54.34%), Postives = 120/173 (69.36%), Query Frame = 0

Query:    1 MSASDMIGIDVETGGLFDPLGFSKDEQSLYKYRQVELKHGRVAMLACLGTLVQSYTH---LPDDVFSNP-RPLGALGQLLSERPLAILQIVIAITLIEVTSGKQDP-ELAPGQLGRFGEAFKPEGEAEMAAVQLKELKNGRLAMVAIIGQWVQELLTGQGPIEQITSGHISPF 168
            MS  +MIG DVE+GGLFDPLGFSKDE SL++ R VELKHGRVAMLA  G LVQS+      P    SNP RPL  L  LLS     ++  ++ I ++E+T GKQD  + APG+LG FG   KP  + E   VQ+ ELK+GRLAM+ ++G  VQEL+TG+GP+EQ+ +G+I PF
Sbjct:    1 MSIREMIGADVESGGLFDPLGFSKDEPSLFRRRAVELKHGRVAMLAVTGILVQSFVRFPGFPPFPVSNPARPLAVLKGLLSTEGNNVVLFLLGIGVVELTIGKQDYIDRAPGELGEFGAFAKPVDKEEWDKVQMAELKHGRLAMLGVVGCLVQELVTGEGPVEQLLNGNIFPF 173          

BLAST of EWM29860.1 vs. NCBI_GenBank
Match: gi|873233856|emb|CEM02552.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 168.318 bits (425), Expect = 1.053e-49
Identity = 101/176 (57.39%), Postives = 117/176 (66.48%), Query Frame = 0

Query:    1 MSASDMIGIDVETGGLFDPLGFSKDEQSLYKYRQVELKHGRVAMLACLGTLVQSYTHLPDDVFSNPRPLGALGQLLSERPLAILQIVIAITLIEVTSGKQDPE-LAPGQLGRFGEAFKPEGEAEMAAVQLKELKNGRLAMVAIIGQWVQELLTGQGPIEQITSGHISPFGDGQGLF 175
            M+  DMIG DVET G++DPLGFSKDE SLY+YR VELKHGRVAMLA LG  V    H   D    P  L A+ Q+ S      LQI+  I  IE++ GKQD E  APG LG FG         E A +QLKE+KNGRLAM+AI G  VQEL+TGQ  ++Q+  GHISPFGDGQGLF
Sbjct:   39 MAVEDMIGADVETRGVWDPLGFSKDESSLYRYRAVELKHGRVAMLAVLGYFVAELWHPLYDGKVEP-GLKAISQVPSA---GWLQILATIAAIELSIGKQDFENRAPGDLG-FGINPFENDPVEFAKLQLKEIKNGRLAMIAIAGMLVQELVTGQTTLQQLREGHISPFGDGQGLF 209