EWM22008.1, cds8665 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22008.1 vs. NCBI_GenBank
Match: gi|585102408|gb|EWM22008.1| (v-type h-atpase [Nannochloropsis gaditana]) HSP 1 Score: 262.692 bits (670), Expect = 5.391e-89 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
Query: 1 MAKWFRSEEMEYVSLIVNEDAAHGAVNDLGMLGIIQFTDLNHEQTAFQRRYISYIKRCDELERKLRYMRTEIAKFGLDTEVNRERRGRKGGREGGREGEGCSDKATMCEVEDIKRAFLPAHSWHCA 126
MAKWFRSEEMEYVSLIVNEDAAHGAVNDLGMLGIIQFTDLNHEQTAFQRRYISYIKRCDELERKLRYMRTEIAKFGLDTEVNRERRGRKGGREGGREGEGCSDKATMCEVEDIKRAFLPAHSWHCA
Sbjct: 1 MAKWFRSEEMEYVSLIVNEDAAHGAVNDLGMLGIIQFTDLNHEQTAFQRRYISYIKRCDELERKLRYMRTEIAKFGLDTEVNRERRGRKGGREGGREGEGCSDKATMCEVEDIKRAFLPAHSWHCA 126
BLAST of EWM22008.1 vs. NCBI_GenBank
Match: gi|1072236372|gb|OEU21100.1| (putative vacuolar proton translocating ATPase A subunit [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 132.109 bits (331), Expect = 3.073e-33 Identity = 58/80 (72.50%), Postives = 67/80 (83.75%), Query Frame = 0
Query: 1 MAKWFRSEEMEYVSLIVNEDAAHGAVNDLGMLGIIQFTDLNHEQTAFQRRYISYIKRCDELERKLRYMRTEIAKFGLDTE 80
MAKWFRSE MEY+SLI+NEDAAH + DLG LG+IQFTDLN + T FQRRY+SY+KRCDELERKLRY TEI KF ++ E
Sbjct: 1 MAKWFRSEPMEYISLIMNEDAAHDCLGDLGKLGVIQFTDLNPDLTPFQRRYVSYVKRCDELERKLRYFSTEIGKFNIECE 80
BLAST of EWM22008.1 vs. NCBI_GenBank
Match: gi|219122580|ref|XP_002181620.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406896|gb|EEC46834.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 130.183 bits (326), Expect = 1.598e-32 Identity = 57/78 (73.08%), Postives = 65/78 (83.33%), Query Frame = 0
Query: 1 MAKWFRSEEMEYVSLIVNEDAAHGAVNDLGMLGIIQFTDLNHEQTAFQRRYISYIKRCDELERKLRYMRTEIAKFGLD 78
MA+WFRSE MEY+SLIVNEDAAH + DLG LG+IQFTDLN + T FQRRY+SY+KRCDELERKLRY EI KF +D
Sbjct: 1 MARWFRSEPMEYISLIVNEDAAHDCLADLGKLGVIQFTDLNPDLTPFQRRYVSYVKRCDELERKLRYFSNEIEKFEID 78
BLAST of EWM22008.1 vs. NCBI_GenBank
Match: gi|397603782|gb|EJK58518.1| (hypothetical protein THAOC_21344 [Thalassiosira oceanica]) HSP 1 Score: 119.783 bits (299), Expect = 1.113e-31 Identity = 54/81 (66.67%), Postives = 64/81 (79.01%), Query Frame = 0
Query: 1 MAKWFRSEEMEYVSLIVNEDAAHGAVNDLGMLGIIQFTDLNHEQTAFQRRYISYIKRCDELERKLRYMRTEIAKFGLDTEV 81
MA+WFRSE MEY+SLIVNEDAAH + DLG L IQFTDLN + T FQRRY+SY++RCDELERKLR+ +E FGL+ E
Sbjct: 1 MARWFRSEHMEYISLIVNEDAAHDCLADLGKLSAIQFTDLNPDLTPFQRRYVSYVRRCDELERKLRFFGSECDNFGLNLET 81
BLAST of EWM22008.1 vs. NCBI_GenBank
Match: gi|1072222991|gb|OEU07749.1| (putative vacuolar proton translocating ATPase A subunit [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 127.102 bits (318), Expect = 1.577e-31 Identity = 55/79 (69.62%), Postives = 66/79 (83.54%), Query Frame = 0
Query: 1 MAKWFRSEEMEYVSLIVNEDAAHGAVNDLGMLGIIQFTDLNHEQTAFQRRYISYIKRCDELERKLRYMRTEIAKFGLDT 79
MAKWFRSE MEY+SLI+NEDAAH + DLG +G+IQFTDLN + T FQRRY++Y+KRCDELERKLR+ EI KF L+T
Sbjct: 1 MAKWFRSEPMEYISLIMNEDAAHDCLADLGKMGVIQFTDLNPDLTPFQRRYVTYVKRCDELERKLRFFNIEIDKFKLET 79
BLAST of EWM22008.1 vs. NCBI_GenBank
Match: gi|1210521206|dbj|GAX19954.1| (V-type H+-transporting ATPase subunit a [Fistulifera solaris]) HSP 1 Score: 125.946 bits (315), Expect = 4.236e-31 Identity = 56/78 (71.79%), Postives = 65/78 (83.33%), Query Frame = 0
Query: 1 MAKWFRSEEMEYVSLIVNEDAAHGAVNDLGMLGIIQFTDLNHEQTAFQRRYISYIKRCDELERKLRYMRTEIAKFGLD 78
MA+WFRSE MEY+SLIVNEDAAH + DLG LG+IQFTDLN + T FQRRY+SY+KRCDELERKLR+ EI KF L+
Sbjct: 1 MARWFRSEPMEYISLIVNEDAAHDCLADLGNLGVIQFTDLNPDLTPFQRRYVSYVKRCDELERKLRFFVGEIEKFELE 78
BLAST of EWM22008.1 vs. NCBI_GenBank
Match: gi|1210512366|dbj|GAX28635.1| (V-type H+-transporting ATPase subunit a [Fistulifera solaris]) HSP 1 Score: 125.946 bits (315), Expect = 4.236e-31 Identity = 56/78 (71.79%), Postives = 65/78 (83.33%), Query Frame = 0
Query: 1 MAKWFRSEEMEYVSLIVNEDAAHGAVNDLGMLGIIQFTDLNHEQTAFQRRYISYIKRCDELERKLRYMRTEIAKFGLD 78
MA+WFRSE MEY+SLIVNEDAAH + DLG LG+IQFTDLN + T FQRRY+SY+KRCDELERKLR+ EI KF L+
Sbjct: 1 MARWFRSEPMEYISLIVNEDAAHDCLADLGNLGVIQFTDLNPDLTPFQRRYVSYVKRCDELERKLRFFVGEIEKFELE 78
BLAST of EWM22008.1 vs. NCBI_GenBank
Match: gi|1072236398|gb|OEU21126.1| (putative vacuolar proton translocating ATPase A subunit [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 125.946 bits (315), Expect = 4.440e-31 Identity = 53/78 (67.95%), Postives = 66/78 (84.62%), Query Frame = 0
Query: 1 MAKWFRSEEMEYVSLIVNEDAAHGAVNDLGMLGIIQFTDLNHEQTAFQRRYISYIKRCDELERKLRYMRTEIAKFGLD 78
MAKWFRSE MEY+S+I+NEDA+H + DLG LG++QFTDLN + T FQRRY+SY+KRCDELERK+RY +EI KF L+
Sbjct: 1 MAKWFRSEPMEYISIIINEDASHDCLADLGKLGVMQFTDLNPDLTPFQRRYVSYVKRCDELERKIRYFSSEIDKFDLE 78
BLAST of EWM22008.1 vs. NCBI_GenBank
Match: gi|1214674530|gb|OWY96751.1| (Vacuolar proton translocating ATPase A subunit [Phytophthora megakarya]) HSP 1 Score: 117.087 bits (292), Expect = 5.151e-31 Identity = 51/75 (68.00%), Postives = 61/75 (81.33%), Query Frame = 0
Query: 3 KWFRSEEMEYVSLIVNEDAAHGAVNDLGMLGIIQFTDLNHEQTAFQRRYISYIKRCDELERKLRYMRTEIAKFGL 77
KW RS EMEY+SLIVNEDAAH V LG LG+++FTDLN E T FQRRY++Y+KRCDE+ERKLRY E+AKF +
Sbjct: 2 KWLRSAEMEYISLIVNEDAAHDCVQKLGDLGVLEFTDLNPELTPFQRRYVNYVKRCDEMERKLRYFEVELAKFSI 76
BLAST of EWM22008.1 vs. NCBI_GenBank
Match: gi|1210521223|dbj|GAX19971.1| (V-type H+-transporting ATPase subunit a [Fistulifera solaris]) HSP 1 Score: 124.405 bits (311), Expect = 1.495e-30 Identity = 54/78 (69.23%), Postives = 65/78 (83.33%), Query Frame = 0
Query: 1 MAKWFRSEEMEYVSLIVNEDAAHGAVNDLGMLGIIQFTDLNHEQTAFQRRYISYIKRCDELERKLRYMRTEIAKFGLD 78
MA+WFRSE MEY+SLIVNEDAAH + DLG +G+IQFTDLN + T FQRRY+SY+KRCDELERKLR+ +E KF L+
Sbjct: 1 MARWFRSEPMEYISLIVNEDAAHDCLADLGRMGVIQFTDLNPDLTPFQRRYVSYVKRCDELERKLRFFVSETDKFELE 78 The following BLAST results are available for this feature:
BLAST of EWM22008.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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