EWM22009.1, cds8663 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22009.1 vs. NCBI_GenBank
Match: gi|585102410|gb|EWM22009.1| (beta-ig-h3 fasciclin [Nannochloropsis gaditana]) HSP 1 Score: 976.082 bits (2522), Expect = 0.000e+0 Identity = 483/483 (100.00%), Postives = 483/483 (100.00%), Query Frame = 0
Query: 1 MHFDTQESRAQFGFLGRRLIKESIAMVRARCRNPSPCRFHPTCLFKWPSIICLSYILRAFYVVTAFVPPFPPAETPRNLFCPSAASLPPPPPETDLLSTLAQDGRFTRLLHLFKEVGLDATLSGPGPWTVLAPTDAALDDQVANLTLIVAAREPKRHLTPLLSYHIIPGKAMGLGDLVAAGDARTRVKTLERSGLSIAVYGGTVLVDEGRILEWGMEAGNGVVHVMDSLLLPALPSDFDPFAAPEAASPGPVLGVTAPLGCWDPLGLWTGKDAATQARLRDAEIKHARLAMLAAIGILTQELVVPTHPYAFQPVLDALRDSTHMAPDVSFLLPLPPIAALAAILAPGVAWEVWSLRRASKDKAPGRPSKEEALTQILKRESPDFEAEREEEREKIDAGNRELNNGRLAMIAVVGMLVQEIVTGRSVLSPWIEFLSCGDSGRSRGGMTTSSPFPSCAPKQKCLLFVSSWNPCGHRLVFGSIKSS 483
MHFDTQESRAQFGFLGRRLIKESIAMVRARCRNPSPCRFHPTCLFKWPSIICLSYILRAFYVVTAFVPPFPPAETPRNLFCPSAASLPPPPPETDLLSTLAQDGRFTRLLHLFKEVGLDATLSGPGPWTVLAPTDAALDDQVANLTLIVAAREPKRHLTPLLSYHIIPGKAMGLGDLVAAGDARTRVKTLERSGLSIAVYGGTVLVDEGRILEWGMEAGNGVVHVMDSLLLPALPSDFDPFAAPEAASPGPVLGVTAPLGCWDPLGLWTGKDAATQARLRDAEIKHARLAMLAAIGILTQELVVPTHPYAFQPVLDALRDSTHMAPDVSFLLPLPPIAALAAILAPGVAWEVWSLRRASKDKAPGRPSKEEALTQILKRESPDFEAEREEEREKIDAGNRELNNGRLAMIAVVGMLVQEIVTGRSVLSPWIEFLSCGDSGRSRGGMTTSSPFPSCAPKQKCLLFVSSWNPCGHRLVFGSIKSS
Sbjct: 1 MHFDTQESRAQFGFLGRRLIKESIAMVRARCRNPSPCRFHPTCLFKWPSIICLSYILRAFYVVTAFVPPFPPAETPRNLFCPSAASLPPPPPETDLLSTLAQDGRFTRLLHLFKEVGLDATLSGPGPWTVLAPTDAALDDQVANLTLIVAAREPKRHLTPLLSYHIIPGKAMGLGDLVAAGDARTRVKTLERSGLSIAVYGGTVLVDEGRILEWGMEAGNGVVHVMDSLLLPALPSDFDPFAAPEAASPGPVLGVTAPLGCWDPLGLWTGKDAATQARLRDAEIKHARLAMLAAIGILTQELVVPTHPYAFQPVLDALRDSTHMAPDVSFLLPLPPIAALAAILAPGVAWEVWSLRRASKDKAPGRPSKEEALTQILKRESPDFEAEREEEREKIDAGNRELNNGRLAMIAVVGMLVQEIVTGRSVLSPWIEFLSCGDSGRSRGGMTTSSPFPSCAPKQKCLLFVSSWNPCGHRLVFGSIKSS 483
BLAST of EWM22009.1 vs. NCBI_GenBank
Match: gi|780355039|ref|WP_045568893.1| (fasciclin [Vibrio sp. S234-5] >gi|778245941|gb|KJR39617.1| fasciclin [Vibrio sp. S234-5]) HSP 1 Score: 96.2857 bits (238), Expect = 1.054e-19 Identity = 51/140 (36.43%), Postives = 79/140 (56.43%), Query Frame = 0
Query: 93 ETDLLSTLAQDGRFTRLLHLFKEVGLDATLSGPGPWTVLAPTDAALDDQVANLTLIVAAREPKRHLTPLLSYHIIPGKAMGLGDLVAAGDARTRVKTLERSGLSIAVYGGTVLVDEGRILEWGMEAGNGVVHVMDSLLLP 232
+TD++ +G FT L+ K GL TL G GP+TV APTD A ++ E K L +L+YH++PGK M D++ G A T++ + I VYGG V+VD ++ ++A NGV+HV+D++++P
Sbjct: 31 KTDIVDVAVANGSFTTLVAAVKAAGLVETLKGDGPFTVFAPTDEAFAKLPEGTVEMLLKPENKDKLVAILTYHVVPGKVMA-ADVIKLGKAT----TVQGQDVMIKVYGGKVMVDNANVVATDVKASNGVIHVIDTVIMP 165
BLAST of EWM22009.1 vs. NCBI_GenBank
Match: gi|1015843707|ref|WP_062840036.1| (hypothetical protein [Achromobacter xylosoxidans] >gi|1000175575|gb|KXJ65476.1| hypothetical protein AXY46_15660 [Achromobacter xylosoxidans] >gi|1137447753|gb|OMP45364.1| hypothetical protein BMR85_12405 [Achromobacter sp. KAs 3-5]) HSP 1 Score: 94.7449 bits (234), Expect = 1.910e-19 Identity = 56/139 (40.29%), Postives = 82/139 (58.99%), Query Frame = 0
Query: 95 DLLSTLAQDGRFTRLLHLFKEVGLDATLSGPGPWTVLAPTDAALDDQVANLTLIVAAREPKRHLTPLLSYHIIPGKAMGLGDLVAAGDART-RVKTLERSGLSIAVYGGTVLVDEGRILEWGMEAGNGVVHVMDSLLLP 232
D++ T G F L+ + GL TL GPGP+TV APTD A + + A + K LT +L+YH++PGK M A D + +VKT+E S L+IAV GG V VD ++++ + A NGV+HV+D++L+P
Sbjct: 21 DIVDTAKSAGSFNTLVTAVQAAGLVDTLKGPGPYTVFAPTDEAFAKVPKDK--LDALLKDKAALTKVLTYHVVPGKVM-------AKDVKPGKVKTVEGSSLTIAVNGGNVTVDNAKVVKTDVAADNGVIHVIDTVLMP 150
BLAST of EWM22009.1 vs. NCBI_GenBank
Match: gi|655226110|ref|WP_028640098.1| (hypothetical protein [Novosphingobium acidiphilum]) HSP 1 Score: 95.1301 bits (235), Expect = 2.346e-19 Identity = 54/143 (37.76%), Postives = 79/143 (55.24%), Query Frame = 0
Query: 93 ETDLLSTLAQDGRFTRLLHLFKEVGLDATLSGPGPWTVLAPTDAALDDQVANLTLIVAAREPKRHLTPLLSYHIIPGKAMGLGDLVAAGDARTRVKTLERSGLSIAVYGGTVLVDEGRILEWGMEAGNGVVHVMDSLLLPALP 235
E D++ T G+F L GL ATL GPGP+TV APTDAA + E K LT +L+YH++PG M D+V +A KT+ + + I V GTV++D +++ + A NGV+HV+D++L+P P
Sbjct: 29 EKDIVDTAVAAGQFKTLTAALDAAGLVATLKGPGPFTVFAPTDAAFAKLPEGTVTTLLKPENKAALTAILTYHVVPGTVMA-ADVVKMSEA----KTVNGAMVRITVNNGTVMIDNAKVVMTDIVATNGVIHVIDTVLMPPQP 166
BLAST of EWM22009.1 vs. NCBI_GenBank
Match: gi|1098355167|emb|SFD82044.1| (Uncaracterized surface protein containing fasciclin (FAS1) repeats [Massilia yuzhufengensis]) HSP 1 Score: 94.7449 bits (234), Expect = 2.397e-19 Identity = 55/138 (39.86%), Postives = 83/138 (60.14%), Query Frame = 0
Query: 95 DLLSTLAQDGRFTRLLHLFKEVGLDATLSGPGPWTVLAPTDAALDDQVANLTLIVAAREPKRHLTPLLSYHIIPGKAMGLGDLVAAGDARTRVKTLERSGLSIAVYGGTVLVDEGRILEWGMEAGNGVVHVMDSLLLP 232
D++ T G F L+ + GL TL GPGP+TV APTD A ++ L ++ K LT +L+YH++PGK M AA VKT+E S L ++ GGTV+VD+ ++++ +EA NGV+HV+DS+++P
Sbjct: 21 DIVDTAKSAGSFNTLVAAVQAAGLVDTLKGPGPFTVFAPTDEAFA-KIPKAKLDALLKD-KAALTKVLTYHVVPGKVM------AASVKPGAVKTVEGSSLMVSAKGGTVMVDKAKVVKTDVEADNGVIHVIDSVIMP 150
BLAST of EWM22009.1 vs. NCBI_GenBank
Match: gi|653065568|ref|WP_027316874.1| (Nex18 symbiotically induced protein [Microvirga flocculans]) HSP 1 Score: 95.1301 bits (235), Expect = 2.416e-19 Identity = 52/142 (36.62%), Postives = 80/142 (56.34%), Query Frame = 0
Query: 93 ETDLLSTLAQDGRFTRLLHLFKEVGLDATLSGPGPWTVLAPTDAALDDQVANLTLIVAAREPKRHLTPLLSYHIIPGKAMGLGDLVAAGDAR--TRVKTLERSGLSIAVYGGTVLVDEGRILEWGMEAGNGVVHVMDSLLLP 232
+ D++ T A G+F L KE GL +TL GPGP+TV APTDAA A + E K LT +L+YH++PG+ V A D KT+ L+++V G V++++ + + + A NGV+HV+D+++LP
Sbjct: 29 DQDIVETAAAAGQFKTLASALKEAGLVSTLKGPGPFTVFAPTDAAFAKLPAGTVENLLKPENKDKLTAILTYHVVPGR-------VTAADVTKLKEAKTVNGKMLNVSVKGSGVMINDANVTQADITASNGVIHVVDTVILP 163
BLAST of EWM22009.1 vs. NCBI_GenBank
Match: gi|947656741|ref|WP_056319456.1| (hypothetical protein [Achromobacter sp. Root170] >gi|946063387|gb|KRB16025.1| hypothetical protein ASD87_23845 [Achromobacter sp. Root170]) HSP 1 Score: 94.3597 bits (233), Expect = 3.224e-19 Identity = 56/139 (40.29%), Postives = 82/139 (58.99%), Query Frame = 0
Query: 95 DLLSTLAQDGRFTRLLHLFKEVGLDATLSGPGPWTVLAPTDAALDDQVANLTLIVAAREPKRHLTPLLSYHIIPGKAMGLGDLVAAGDART-RVKTLERSGLSIAVYGGTVLVDEGRILEWGMEAGNGVVHVMDSLLLP 232
D++ T G F L+ + GL TL GPGP+TV APTD A + + A + K LT +L+YH++PGK M A D + +VKT+E S L+IAV GG V VD ++++ + A NGV+HV+D++L+P
Sbjct: 21 DIVDTAKSAGSFNTLVTAVQAAGLVDTLKGPGPYTVFAPTDEAFAKVPKDK--LDALLKDKAALTKVLTYHVVPGKVM-------AKDVKPGKVKTVEGSSLTIAVDGGNVTVDNAKVVKTDVAADNGVIHVIDTVLMP 150
BLAST of EWM22009.1 vs. NCBI_GenBank
Match: gi|518766556|ref|WP_019923845.1| (beta-Ig-H3/fasciclin [Duganella zoogloeoides]) HSP 1 Score: 93.9745 bits (232), Expect = 3.851e-19 Identity = 54/138 (39.13%), Postives = 84/138 (60.87%), Query Frame = 0
Query: 95 DLLSTLAQDGRFTRLLHLFKEVGLDATLSGPGPWTVLAPTDAALDDQVANLTLIVAAREPKRHLTPLLSYHIIPGKAMGLGDLVAAGDARTRVKTLERSGLSIAVYGGTVLVDEGRILEWGMEAGNGVVHVMDSLLLP 232
D++ T G F L+ + GL++TL GPGP+TV APTDAA ++ L ++ K LT +L+YH++PGK M V +GD VKT+E + + +AV G V+VD+ + + + A NGV+HV+D++L+P
Sbjct: 21 DIVDTAKAAGSFNTLVTAVQAAGLESTLKGPGPFTVFAPTDAAFA-KIPKAKLDALLKD-KAALTKVLTYHVVPGKVMAAD--VKSGD----VKTVEGASVKVAVKGDKVMVDKAHVTKTDIAADNGVIHVIDTVLMP 150
BLAST of EWM22009.1 vs. NCBI_GenBank
Match: gi|947482832|ref|WP_056147126.1| (MULTISPECIES: hypothetical protein [Duganella] >gi|944716508|gb|KQN67726.1| hypothetical protein ASF04_18255 [Duganella sp. Leaf61] >gi|1078250675|gb|OFA00025.1| immunogenic protein MPT70 precursor [Duganella phyllosphaerae]) HSP 1 Score: 93.9745 bits (232), Expect = 4.600e-19 Identity = 54/138 (39.13%), Postives = 84/138 (60.87%), Query Frame = 0
Query: 95 DLLSTLAQDGRFTRLLHLFKEVGLDATLSGPGPWTVLAPTDAALDDQVANLTLIVAAREPKRHLTPLLSYHIIPGKAMGLGDLVAAGDARTRVKTLERSGLSIAVYGGTVLVDEGRILEWGMEAGNGVVHVMDSLLLP 232
D++ T G F L+ + GL++TL GPGP+TV APTDAA ++ L ++ K LT +L+YH++PGK M V +GD VKT+E + + +AV G V+VD+ + + + A NGV+HV+D++L+P
Sbjct: 21 DIVDTAKAAGSFNTLVTAVQAAGLESTLKGPGPFTVFAPTDAAFA-KIPKAKLDALLKD-KAALTKVLTYHVVPGKVMAAD--VKSGD----VKTVEGASVKVAVKGDKVMVDKAHVTKTDIAADNGVIHVIDTVLMP 150
BLAST of EWM22009.1 vs. NCBI_GenBank
Match: gi|1134277198|ref|WP_076517738.1| (hypothetical protein [Achromobacter sp. MFA1 R4] >gi|1095041138|emb|SEI60244.1| Uncaracterized surface protein containing fasciclin (FAS1) repeats [Achromobacter sp. NFACC18-2] >gi|1131765166|emb|SIT17771.1| Uncaracterized surface protein containing fasciclin (FAS1) repeats [Achromobacter sp. MFA1 R4]) HSP 1 Score: 93.5893 bits (231), Expect = 6.184e-19 Identity = 56/138 (40.58%), Postives = 82/138 (59.42%), Query Frame = 0
Query: 95 DLLSTLAQDGRFTRLLHLFKEVGLDATLSGPGPWTVLAPTDAALDDQVANLTLIVAAREPKRHLTPLLSYHIIPGKAMGLGDLVAAGDARTRVKTLERSGLSIAVYGGTVLVDEGRILEWGMEAGNGVVHVMDSLLLP 232
D++ T G F L+ + GL TL GPGP+TV APTD A + + A + K LT +L+YH++PGK M V AG VKT+E S L++ V GGTV+VD ++++ + A NGV+HV+D++L+P
Sbjct: 21 DIVDTAKSAGSFNTLVTAVQAAGLVDTLKGPGPFTVFAPTDEAFAKVPKDK--LDALLKDKAALTKVLTYHVVPGKVMAKD--VKAGP----VKTVEGSSLTVTVKGGTVMVDNAKVVKTDVVADNGVIHVIDTVLMP 150 The following BLAST results are available for this feature:
BLAST of EWM22009.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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