EWM22014.1, cds8659 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22014.1 vs. NCBI_GenBank
Match: gi|585102419|gb|EWM22014.1| (Uncharacterized protein family UPF0061 [Nannochloropsis gaditana]) HSP 1 Score: 160.229 bits (404), Expect = 7.162e-50 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0
Query: 1 MDFFDPDFIPNGSDNGGRYTYVKQPEICKWNLEKFAEALSLLLPLDRSLPLLSSLYDDERRRSWWRSFSRRWRRRRRISR 80
MDFFDPDFIPNGSDNGGRYTYVKQPEICKWNLEKFAEALSLLLPLDRSLPLLSSLYDDERRRSWWRSFSRRWRRRRRISR
Sbjct: 1 MDFFDPDFIPNGSDNGGRYTYVKQPEICKWNLEKFAEALSLLLPLDRSLPLLSSLYDDERRRSWWRSFSRRWRRRRRISR 80
BLAST of EWM22014.1 vs. NCBI_GenBank
Match: gi|565319900|gb|ETE70920.1| (Selenoprotein O, partial [Ophiophagus hannah]) HSP 1 Score: 85.8853 bits (211), Expect = 7.910e-18 Identity = 40/71 (56.34%), Postives = 49/71 (69.01%), Query Frame = 0
Query: 1 MDFFDPDFIPNGSDNGGRYTYVKQPEICKWNLEKFAEALSLLLPLDRSLPLLSSLYDDERRRSWWRSFSRR 71
MD +DP+ I NGSDN GRY Y KQPEICKWNL KFAEAL LPL+ S+P+L YD E + + + R+
Sbjct: 150 MDRYDPEHICNGSDNSGRYAYNKQPEICKWNLTKFAEALVPELPLEISMPILEEEYDAEFEKHYLQIMRRK 220
BLAST of EWM22014.1 vs. NCBI_GenBank
Match: gi|1004692634|ref|XP_015745922.1| (PREDICTED: selenoprotein O [Python bivittatus]) HSP 1 Score: 85.8853 bits (211), Expect = 8.959e-18 Identity = 40/71 (56.34%), Postives = 49/71 (69.01%), Query Frame = 0
Query: 1 MDFFDPDFIPNGSDNGGRYTYVKQPEICKWNLEKFAEALSLLLPLDRSLPLLSSLYDDERRRSWWRSFSRR 71
MD +DP+ I NGSDN GRY Y KQPEICKWNL KFAEAL LPL+ S+P+L YD E + + + R+
Sbjct: 264 MDRYDPEHICNGSDNTGRYAYNKQPEICKWNLTKFAEALVPELPLEMSIPILEEEYDAEFEKHYLQIMRRK 334
BLAST of EWM22014.1 vs. NCBI_GenBank
Match: gi|1176330843|ref|XP_020668536.1| (selenoprotein O isoform X2 [Pogona vitticeps]) HSP 1 Score: 85.5001 bits (210), Expect = 1.154e-17 Identity = 40/71 (56.34%), Postives = 48/71 (67.61%), Query Frame = 0
Query: 1 MDFFDPDFIPNGSDNGGRYTYVKQPEICKWNLEKFAEALSLLLPLDRSLPLLSSLYDDERRRSWWRSFSRR 71
MD +DP+ I NGSDN GRY Y KQPEICKWNL K AEAL LPLD S+P+L YD E R + + ++
Sbjct: 356 MDRYDPEHICNGSDNAGRYAYNKQPEICKWNLGKLAEALVPELPLDISIPILEEDYDAEYERHYLQKMRKK 426
BLAST of EWM22014.1 vs. NCBI_GenBank
Match: gi|1176330841|ref|XP_020668533.1| (selenoprotein O isoform X1 [Pogona vitticeps]) HSP 1 Score: 85.5001 bits (210), Expect = 1.169e-17 Identity = 40/71 (56.34%), Postives = 48/71 (67.61%), Query Frame = 0
Query: 1 MDFFDPDFIPNGSDNGGRYTYVKQPEICKWNLEKFAEALSLLLPLDRSLPLLSSLYDDERRRSWWRSFSRR 71
MD +DP+ I NGSDN GRY Y KQPEICKWNL K AEAL LPLD S+P+L YD E R + + ++
Sbjct: 403 MDRYDPEHICNGSDNAGRYAYNKQPEICKWNLGKLAEALVPELPLDISIPILEEDYDAEYERHYLQKMRKK 473
BLAST of EWM22014.1 vs. NCBI_GenBank
Match: gi|927130439|ref|XP_013909722.1| (PREDICTED: selenoprotein O [Thamnophis sirtalis]) HSP 1 Score: 85.1149 bits (209), Expect = 1.444e-17 Identity = 40/71 (56.34%), Postives = 49/71 (69.01%), Query Frame = 0
Query: 1 MDFFDPDFIPNGSDNGGRYTYVKQPEICKWNLEKFAEALSLLLPLDRSLPLLSSLYDDERRRSWWRSFSRR 71
MD +DP+ I NGSDN GRY Y KQPEICKWNL KFAEAL LPL+ S+P+L YD E + + + R+
Sbjct: 349 MDRYDPEHICNGSDNTGRYAYNKQPEICKWNLTKFAEALVPELPLEISMPILEEEYDAEFEKHYLQIMRRK 419
BLAST of EWM22014.1 vs. NCBI_GenBank
Match: gi|221116553|ref|XP_002164964.1| (PREDICTED: selenoprotein O-like [Hydra vulgaris]) HSP 1 Score: 85.1149 bits (209), Expect = 1.586e-17 Identity = 35/68 (51.47%), Postives = 49/68 (72.06%), Query Frame = 0
Query: 1 MDFFDPDFIPNGSDNGGRYTYVKQPEICKWNLEKFAEALSLLLPLDRSLPLLSSLYDDERRRSWWRSF 68
MD+F+ DFI N SD GRY+Y KQPEICKWNL K AEA+ +PLD++ +++ +YD E R S+++
Sbjct: 336 MDYFNSDFICNASDTNGRYSYKKQPEICKWNLLKLAEAIKNAVPLDKTKEIINEIYDSEFRESYYKGM 403
BLAST of EWM22014.1 vs. NCBI_GenBank
Match: gi|762129176|ref|XP_011447705.1| (PREDICTED: selenoprotein O [Crassostrea gigas]) HSP 1 Score: 84.3445 bits (207), Expect = 2.490e-17 Identity = 34/72 (47.22%), Postives = 55/72 (76.39%), Query Frame = 0
Query: 1 MDFFDPDFIPNGSDNGGRYTYVKQPEICKWNLEKFAEALSLLLPLDRSLPLLSSLYDDERRRSWWRSFSRRW 72
MD +DPDFI N SD+GGRYTY+KQP+ICKWN++KFAEA+ ++PL +++P + ++D+E + + +++
Sbjct: 344 MDKYDPDFICNASDDGGRYTYIKQPQICKWNIKKFAEAIQGVVPLAKTVP-ETKIFDEEYSDYYTKKMRKKF 414
BLAST of EWM22014.1 vs. NCBI_GenBank
Match: gi|405975916|gb|EKC40447.1| (Selenoprotein O [Crassostrea gigas]) HSP 1 Score: 84.3445 bits (207), Expect = 2.987e-17 Identity = 34/72 (47.22%), Postives = 55/72 (76.39%), Query Frame = 0
Query: 1 MDFFDPDFIPNGSDNGGRYTYVKQPEICKWNLEKFAEALSLLLPLDRSLPLLSSLYDDERRRSWWRSFSRRW 72
MD +DPDFI N SD+GGRYTY+KQP+ICKWN++KFAEA+ ++PL +++P + ++D+E + + +++
Sbjct: 308 MDKYDPDFICNASDDGGRYTYIKQPQICKWNIKKFAEAIQGVVPLAKTVP-ETKIFDEEYSDYYTKKMRKKF 378
BLAST of EWM22014.1 vs. NCBI_GenBank
Match: gi|1002582322|ref|XP_015670168.1| (PREDICTED: selenoprotein O [Protobothrops mucrosquamatus]) HSP 1 Score: 83.9593 bits (206), Expect = 3.503e-17 Identity = 40/71 (56.34%), Postives = 48/71 (67.61%), Query Frame = 0
Query: 1 MDFFDPDFIPNGSDNGGRYTYVKQPEICKWNLEKFAEALSLLLPLDRSLPLLSSLYDDERRRSWWRSFSRR 71
MD +DP+ I NGSDN GRY Y KQPEICKWNL KFAEAL LPL+ S P+L YD E + + + R+
Sbjct: 354 MDRYDPEHICNGSDNTGRYAYNKQPEICKWNLTKFAEALVPELPLEISTPILEEEYDAEFEKHYLQMMRRK 424 The following BLAST results are available for this feature:
BLAST of EWM22014.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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