EWM22015.1, cds8653 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22015.1 vs. NCBI_GenBank
Match: gi|585102421|gb|EWM22015.1| (calcium-binding protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 861.292 bits (2224), Expect = 0.000e+0 Identity = 438/438 (100.00%), Postives = 438/438 (100.00%), Query Frame = 0
Query: 1 MKAACPSVRRAQHSLPSSDSTSHLSSGRRASTRAGLMPISAPAPGRAIKLVEETGIRPDAAPASLPSSSPSSSPSSSSSPSSQPLPSSLMSSPSPSALVVSSPPRFLLVQFLPLVLLLTALTSSSAFLRVTPALPARRAFAPSPLEAMTFRITSANLLAPIFKRVDSNGTRESAFQEQYLRRHSRVIDRLLGSRDGEDERLLPDVLCVQEFWTQGSAYRRLYASRLCEEKGYKLVEVERTNARGDGVACFVSPRVELVDYRPIFFLDCGDRVGLLCRVRVRDEEAGEGGEQEQCDLLVVNTHLLFPHNAYSSRIRLREVQKILGFIDKYKHDEDLGPLPIIFTGDLNGSPKGQVFEYLRHKGFVSAFEAYNRPRAPHKVPSLFSSLFSSLFSFLFSFLFSSLFSFLFSFLFSSLFSSLLFFLFSLFSLFPSLFPSLSL 438
MKAACPSVRRAQHSLPSSDSTSHLSSGRRASTRAGLMPISAPAPGRAIKLVEETGIRPDAAPASLPSSSPSSSPSSSSSPSSQPLPSSLMSSPSPSALVVSSPPRFLLVQFLPLVLLLTALTSSSAFLRVTPALPARRAFAPSPLEAMTFRITSANLLAPIFKRVDSNGTRESAFQEQYLRRHSRVIDRLLGSRDGEDERLLPDVLCVQEFWTQGSAYRRLYASRLCEEKGYKLVEVERTNARGDGVACFVSPRVELVDYRPIFFLDCGDRVGLLCRVRVRDEEAGEGGEQEQCDLLVVNTHLLFPHNAYSSRIRLREVQKILGFIDKYKHDEDLGPLPIIFTGDLNGSPKGQVFEYLRHKGFVSAFEAYNRPRAPHKVPSLFSSLFSSLFSFLFSFLFSSLFSFLFSFLFSSLFSSLLFFLFSLFSLFPSLFPSLSL
Sbjct: 1 MKAACPSVRRAQHSLPSSDSTSHLSSGRRASTRAGLMPISAPAPGRAIKLVEETGIRPDAAPASLPSSSPSSSPSSSSSPSSQPLPSSLMSSPSPSALVVSSPPRFLLVQFLPLVLLLTALTSSSAFLRVTPALPARRAFAPSPLEAMTFRITSANLLAPIFKRVDSNGTRESAFQEQYLRRHSRVIDRLLGSRDGEDERLLPDVLCVQEFWTQGSAYRRLYASRLCEEKGYKLVEVERTNARGDGVACFVSPRVELVDYRPIFFLDCGDRVGLLCRVRVRDEEAGEGGEQEQCDLLVVNTHLLFPHNAYSSRIRLREVQKILGFIDKYKHDEDLGPLPIIFTGDLNGSPKGQVFEYLRHKGFVSAFEAYNRPRAPHKVPSLFSSLFSSLFSFLFSFLFSSLFSFLFSFLFSSLFSSLLFFLFSLFSLFPSLFPSLSL 438
BLAST of EWM22015.1 vs. NCBI_GenBank
Match: gi|553178913|ref|XP_005852620.1| (hypothetical protein NGA_0713500, partial [Nannochloropsis gaditana CCMP526] >gi|422295911|gb|EKU23210.1| hypothetical protein NGA_0713500, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 496.508 bits (1277), Expect = 2.303e-173 Identity = 266/269 (98.88%), Postives = 268/269 (99.63%), Query Frame = 0
Query: 97 ALVVSSPPRFLLVQFLPLVLLLTALTSSSAFLRVTPALPARRAFAPSPLEAMTFRITSANLLAPIFKRVDSNGTRESAFQEQYLRRHSRVIDRLLGSRDGEDERLLPDVLCVQEFWTQGSAYRRLYASRLCEEKGYKLVEVERTNARGDGVACFVSPRVELVDYRPIFFLDCGDRVGLLCRVRVRDEEAGEGGEQEQCDLLVVNTHLLFPHNAYSSRIRLREVQKILGFIDKYKHDEDLGPLPIIFTGDLNGSPKGQVFEYLRHKGFVS 365
ALVVSSPPRFLLVQ LPLVLLLTALTSSSAFLRVTPALPARRAFAPSPLEAMTFRITSANLLAPIFKRVDSNGTRESAF+EQYLRRHSRVIDRLLGSRDGEDERLLPDVLCVQEFWTQGSAYRRLYASRLCEEKGYKLVEVERTNARGDGVACFVSPRVELVDYRPIFFLDCGDRVGLLCRVR+RDEEAGEGGEQEQCDLLVVNTHLLFPHNAYSSRIRLREVQKILGFIDKYKHDEDLGPLPIIFTGDLNGSPKGQVFEYLRHKGFVS
Sbjct: 40 ALVVSSPPRFLLVQCLPLVLLLTALTSSSAFLRVTPALPARRAFAPSPLEAMTFRITSANLLAPIFKRVDSNGTRESAFEEQYLRRHSRVIDRLLGSRDGEDERLLPDVLCVQEFWTQGSAYRRLYASRLCEEKGYKLVEVERTNARGDGVACFVSPRVELVDYRPIFFLDCGDRVGLLCRVRLRDEEAGEGGEQEQCDLLVVNTHLLFPHNAYSSRIRLREVQKILGFIDKYKHDEDLGPLPIIFTGDLNGSPKGQVFEYLRHKGFVS 308
BLAST of EWM22015.1 vs. NCBI_GenBank
Match: gi|729349210|ref|XP_010542821.1| (PREDICTED: uncharacterized calcium-binding protein At1g02270-like isoform X4 [Tarenaya hassleriana]) HSP 1 Score: 167.933 bits (424), Expect = 6.950e-44 Identity = 89/233 (38.20%), Postives = 136/233 (58.37%), Query Frame = 0
Query: 143 SPLEAMTFRITSANLLAPIFKRVDSNGT--RESAFQEQYLRRHSRVIDRLLGSRDGEDERLLPDVLCVQEFWTQGSAYRRLYASRLCEEKGYKLVEVERTNARGDGVACFV-SPRVELVDYRPIFFLDCGDRVGLLCRVRVRDEEAGEGGEQEQCDLLVVNTHLLFPHNAYSSRIRLREVQKILGFIDKYKHDEDLGPLPIIFTGDLNGSPKGQVFEYLRHKGFVSAFEAYNR 372
+ + T T+ N+LAPI+KR+D RES F ++ R+ R++D LL R ++C+QEFW R+Y RL GY ++ RTN RGDG+ V E+V++R + F D GDRV L V+ + G E+ + + L+VNTHLLFPH++ S +RL +V KIL +++ Y+ + LG +PII GD NGS +G V+++LR +GFVS+++ +R
Sbjct: 88 ATMGEQTVSCTTFNILAPIYKRLDQQNQSIRESDFHARWFDRNQRILDWLLHDRSS--------IICLQEFWVGNGELERMYRERLGS-GGYTTFQLPRTNERGDGLLTAVHKDDFEVVNHRELLFNDFGDRVAQLLHVQSVVPFSHNGNEKVRQEFLIVNTHLLFPHDSSLSIVRLHQVYKILEYLETYQKENKLGNMPIILCGDWNGSKRGHVYKFLRSQGFVSSYDIAHR 311
BLAST of EWM22015.1 vs. NCBI_GenBank
Match: gi|1174566745|gb|OQU91949.1| (hypothetical protein SORBI_3001G263100 [Sorghum bicolor] >gi|1174566748|gb|OQU91952.1| hypothetical protein SORBI_3001G263100 [Sorghum bicolor]) HSP 1 Score: 164.466 bits (415), Expect = 7.445e-44 Identity = 88/223 (39.46%), Postives = 131/223 (58.74%), Query Frame = 0
Query: 153 TSANLLAPIFKRVDSNGTRESAFQEQYLRRHSRVIDRLLGSRDGEDERLLPDVLCVQEFWTQGSAYRRLYASRLCEEKGYKLVEVERTNARGDGVACFV-SPRVELVDYRPIFFLDCGDRVGLLCRVR-----VRDEEAGEGGEQEQCDLLVVNTHLLFPHNAYSSRIRLREVQKILGFIDKYKHDEDLGPLPIIFTGDLNGSPKGQVFEYLRHKGFVSAFEA 369
T+ N+LAPI+KR+D+ RES ++ + R+ ++IDRLL ++C+QE W +Y RL + Y L ++ RTN RGDG+ V S ++DYR + F D GDRV L V +++ +Q L+VNTHLLFPH+ S +RLR+V KIL +I+ Y+ + LGP+PII GD NGS +GQV+++LR +GFVS+++
Sbjct: 34 TTFNILAPIYKRMDNENCRESQYRAYWFSRNEKIIDRLLADHSS--------IICLQEVWLGNDELVDMYQKRL-GDANYMLFKLARTNNRGDGLLTAVHSNYFNVLDYRELLFNDIGDRVAQLLHVESAMPFLQNRSTSCVHQQS----LIVNTHLLFPHDHSLSIVRLRQVYKILQYIEAYQEEHKLGPMPIILCGDWNGSKRGQVYKFLRSQGFVSSYDT 243
BLAST of EWM22015.1 vs. NCBI_GenBank
Match: gi|971520328|dbj|GAQ77921.1| (calcium-binding endonuclease/exonuclease/phosphatase family [Klebsormidium nitens]) HSP 1 Score: 172.555 bits (436), Expect = 8.806e-44 Identity = 97/255 (38.04%), Postives = 148/255 (58.04%), Query Frame = 0
Query: 134 LPARRAFAPS----PLEAMT--FRITSANLLAPIFKRVDSNGTRESAFQEQYLRRHSRVIDRLLGSRDGEDERLLPDVLCVQEFWTQGSAYRRLYASRLCEEKGYKLVEVERTNARGDGVACFV-SPRVELVDYRPIFFLDCGDRVG---------LLCRVRVRDEEA---GEGGEQEQCDLLVVNTHLLFPHNAYSSRIRLREVQKILGFIDKYKHDEDLGPLPIIFTGDLNGSPKGQVFEYLRHKGFVSAFEA 369
L A R PS LEA T +T+ N+LAPI+KRV +G RESA Q ++ +R+ +++ LL R ++C+QEFW + LY ++L GY + ++ RTN +GDG+ V S + ++D R I F DCGDRV LL + + D EA G + +L++VNTHL+FPHN + IRLR+V K++ ++ +Y+ + +L P+PII GD NGS GQV+++LR +G +S ++A
Sbjct: 215 LAAGREAGPSGREEALEAGTDFISVTTFNILAPIYKRVSGDGERESADQARWKKRNQEIVELLLTKR--------SSIICLQEFWHKNEELCELYRAKLGA-AGYTMFQMGRTNDKGDGLFTAVQSDHLRVLDMREIVFHDCGDRVAQLFHLQATELLSKCSIDDHEARPFDWCGTEHAAELILVNTHLMFPHNGNACVIRLRQVYKLVDYLGRYQRERNLPPMPIILCGDWNGSKHGQVYKFLRSRGCISTYDA 460
BLAST of EWM22015.1 vs. NCBI_GenBank
Match: gi|1142701933|gb|AQK65857.1| (Calcium-binding endonuclease/exonuclease/phosphatase family [Zea mays]) HSP 1 Score: 162.925 bits (411), Expect = 1.409e-43 Identity = 93/255 (36.47%), Postives = 139/255 (54.51%), Query Frame = 0
Query: 143 SPLEAMTFRITSANLLAPIFKRVDSNGTRESAFQEQYLRRHSRVIDRLLGSRDGEDERLLPDVLCVQEFWTQGSAYRRLYASRLCEEKGYKLVEVERTNARGDGVACFVSPRV-ELVDYRPIFFLDCGDRVGLLCRVR-----VRDEEAGEGGEQEQCDLLVVNTHLLFPHNAYSSRIRLREVQKILGFIDKYKHDEDLGPLPIIFTGDLNGSPKGQVFEYLRHKGFVSAFEAYNR----PRAPHKVPSLFSSLF 387
P + T+ N+LAPI+KR+D+ RES ++ + R+ ++IDRLL ++C+QE W +Y RL + Y L ++ RTN RGDG+ V +++YR + F D GDRV L V +++ +Q L+VNTHLLFPH+ S +RLR+V KIL +I+ Y + LGPLPII GD NGS +GQV+++LR +GFVS+++ ++ HKV F+ L
Sbjct: 24 QPRDERCVSCTTFNILAPIYKRMDNENCRESQYRAYWFSRNEKIIDRLLADH--------SSIICLQEVWLGNDELVDMYQKRL-GDANYMLFKLARTNNRGDGLLTAVHRNYFNVLNYRELLFNDIGDRVAQLLHVESAMPFLQNRSTSCVHQQS----LIVNTHLLFPHDHSLSIVRLRQVYKILQYIEAYLEEHKLGPLPIILCGDWNGSKRGQVYKFLRSQGFVSSYDTAHQYSDSEEDAHKVTRRFAILI 265
BLAST of EWM22015.1 vs. NCBI_GenBank
Match: gi|727569313|ref|XP_010457191.1| (PREDICTED: uncharacterized calcium-binding protein At1g02270 isoform X2 [Camelina sativa]) HSP 1 Score: 167.933 bits (424), Expect = 2.984e-43 Identity = 90/253 (35.57%), Postives = 143/253 (56.52%), Query Frame = 0
Query: 117 LLTALTSSSAFLRVTPALPARRAFAPSPLEAMTFRITSANLLAPIFKRVDSNGTRESAFQEQYLRRHSRVIDRLLGSRDGEDERLLPDVLCVQEFWTQGSAYRRLYASRLCEEKGYKLVEVERTNARGDGVACFVSP-RVELVDYRPIFFLDCGDRVGLLCRVRVRDEEAGEGGEQEQCDLLVVNTHLLFPHNAYSSRIRLREVQKILGFIDKYKHDEDLGPLPIIFTGDLNGSPKGQVFEYLRHKGFVSAFE 368
LL+ + ++ +R+ L + + S + TF N+LAPI+KRVD RES F E +L R+ R++D LL R V+C+QE W +Y +L GY + ++ RTN RGDG+ + ++V+YR + F D GDRV L V+ G + Q ++++VNTHLLFPH++ S +RL +V KIL +++ Y+ + L +PII GD NGS +G V+++LR +GF+S+++
Sbjct: 53 LLSRINKPASLMRLNSNLAS--SMVESNISCTTF-----NILAPIYKRVDQQSIRESDFHELWLARNQRILDLLLHKRSS--------VICLQEVWVGNEELVNMYHDQLATS-GYTIFQLARTNGRGDGLLTAIHKDHFKVVNYRELLFNDFGDRVAQLLHVKSVVPFPLNGKQDIQQEVIIVNTHLLFPHDSSLSVVRLHQVYKILEYLEAYQKEYKLNHMPIILCGDWNGSKRGHVYKFLRSQGFISSYD 289
BLAST of EWM22015.1 vs. NCBI_GenBank
Match: gi|1174566747|gb|OQU91951.1| (hypothetical protein SORBI_3001G263100 [Sorghum bicolor]) HSP 1 Score: 165.236 bits (417), Expect = 4.248e-43 Identity = 88/223 (39.46%), Postives = 131/223 (58.74%), Query Frame = 0
Query: 153 TSANLLAPIFKRVDSNGTRESAFQEQYLRRHSRVIDRLLGSRDGEDERLLPDVLCVQEFWTQGSAYRRLYASRLCEEKGYKLVEVERTNARGDGVACFV-SPRVELVDYRPIFFLDCGDRVGLLCRVR-----VRDEEAGEGGEQEQCDLLVVNTHLLFPHNAYSSRIRLREVQKILGFIDKYKHDEDLGPLPIIFTGDLNGSPKGQVFEYLRHKGFVSAFEA 369
T+ N+LAPI+KR+D+ RES ++ + R+ ++IDRLL ++C+QE W +Y RL + Y L ++ RTN RGDG+ V S ++DYR + F D GDRV L V +++ +Q L+VNTHLLFPH+ S +RLR+V KIL +I+ Y+ + LGP+PII GD NGS +GQV+++LR +GFVS+++
Sbjct: 34 TTFNILAPIYKRMDNENCRESQYRAYWFSRNEKIIDRLLADH--------SSIICLQEVWLGNDELVDMYQKRL-GDANYMLFKLARTNNRGDGLLTAVHSNYFNVLDYRELLFNDIGDRVAQLLHVESAMPFLQNRSTSCVHQQS----LIVNTHLLFPHDHSLSIVRLRQVYKILQYIEAYQEEHKLGPMPIILCGDWNGSKRGQVYKFLRSQGFVSSYDT 243
BLAST of EWM22015.1 vs. NCBI_GenBank
Match: gi|514817115|ref|XP_004983287.1| (PREDICTED: uncharacterized calcium-binding protein At1g02270 isoform X4 [Setaria italica]) HSP 1 Score: 164.851 bits (416), Expect = 4.802e-43 Identity = 90/231 (38.96%), Postives = 133/231 (57.58%), Query Frame = 0
Query: 144 PLEAMTFRITSANLLAPIFKRVDSNGTRESAFQEQYLRRHSRVIDRLLGSRDGEDERLLPDVLCVQEFWTQGSAYRRLYASRLCEEKGYKLVEVERTNARGDGVACFV-SPRVELVDYRPIFFLDCGDRVGLLCRVR----VRDEEAGEGGEQEQCDLLVVNTHLLFPHNAYSSRIRLREVQKILGFIDKYKHDEDLGPLPIIFTGDLNGSPKGQVFEYLRHKGFVSAFEA 369
P + T+ N+LAPI+KR+DS RES ++ + R+ ++IDRLL ++C+QE W +Y RL + Y L ++ RTN RGDG+ V S +++YR + F D GDRV L V V + +Q+ L+VNTHLLFPH+ S +RLR+V KIL +I+ Y+ + LGP+PII GD NGS +GQV+++LR +GFVS+++
Sbjct: 24 PRDERCVSCTTFNILAPIYKRMDSENCRESQYRAYWFSRNEKIIDRLLADS--------SSIICLQEVWLGNDELVDMYQKRL-GDANYTLFKLARTNNRGDGLLTAVHSSYFNVLNYRELLFNDFGDRVAQLLHVESAMPVLQNRSTRCVQQQS---LIVNTHLLFPHDHSLSVVRLRQVYKILQYIEAYQEENKLGPMPIILCGDWNGSKRGQVYKFLRSQGFVSSYDT 242
BLAST of EWM22015.1 vs. NCBI_GenBank
Match: gi|729349201|ref|XP_010542818.1| (PREDICTED: uncharacterized calcium-binding protein At1g02270-like isoform X2 [Tarenaya hassleriana]) HSP 1 Score: 167.933 bits (424), Expect = 4.826e-43 Identity = 89/233 (38.20%), Postives = 136/233 (58.37%), Query Frame = 0
Query: 143 SPLEAMTFRITSANLLAPIFKRVDSNGT--RESAFQEQYLRRHSRVIDRLLGSRDGEDERLLPDVLCVQEFWTQGSAYRRLYASRLCEEKGYKLVEVERTNARGDGVACFV-SPRVELVDYRPIFFLDCGDRVGLLCRVRVRDEEAGEGGEQEQCDLLVVNTHLLFPHNAYSSRIRLREVQKILGFIDKYKHDEDLGPLPIIFTGDLNGSPKGQVFEYLRHKGFVSAFEAYNR 372
+ + T T+ N+LAPI+KR+D RES F ++ R+ R++D LL R ++C+QEFW R+Y RL GY ++ RTN RGDG+ V E+V++R + F D GDRV L V+ + G E+ + + L+VNTHLLFPH++ S +RL +V KIL +++ Y+ + LG +PII GD NGS +G V+++LR +GFVS+++ +R
Sbjct: 85 ATMGEQTVSCTTFNILAPIYKRLDQQNQSIRESDFHARWFDRNQRILDWLLHDRSS--------IICLQEFWVGNGELERMYRERLGS-GGYTTFQLPRTNERGDGLLTAVHKDDFEVVNHRELLFNDFGDRVAQLLHVQSVVPFSHNGNEKVRQEFLIVNTHLLFPHDSSLSIVRLHQVYKILEYLETYQKENKLGNMPIILCGDWNGSKRGHVYKFLRSQGFVSSYDIAHR 308 The following BLAST results are available for this feature:
BLAST of EWM22015.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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