EWM29857.1, cds864 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29857.1 vs. NCBI_GenBank
Match: gi|585112438|gb|EWM29857.1| (dna-binding horma domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 460.299 bits (1183), Expect = 4.376e-164 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0 Query: 1 MSFAVPAASMSSTPAAPAADNSVITLRGSTDIVVEFFEHAITCILYQRGIYPPEDFERKTKYGLALHVAREEGLVTYLKNVLEQLRQWLTSSNVQKLVVVVTGMESQAVLERWVFSVDTAQEAATNPQGYQAQKSQKEITSEIAAIIRQITCSVSFMPLLAERCSFDLLVYTDKDVLVPATWEDSDPRLIQQAEEVRLRSVNTKVHKVDTMVAYRMEPAGQG 222 MSFAVPAASMSSTPAAPAADNSVITLRGSTDIVVEFFEHAITCILYQRGIYPPEDFERKTKYGLALHVAREEGLVTYLKNVLEQLRQWLTSSNVQKLVVVVTGMESQAVLERWVFSVDTAQEAATNPQGYQAQKSQKEITSEIAAIIRQITCSVSFMPLLAERCSFDLLVYTDKDVLVPATWEDSDPRLIQQAEEVRLRSVNTKVHKVDTMVAYRMEPAGQG Sbjct: 1 MSFAVPAASMSSTPAAPAADNSVITLRGSTDIVVEFFEHAITCILYQRGIYPPEDFERKTKYGLALHVAREEGLVTYLKNVLEQLRQWLTSSNVQKLVVVVTGMESQAVLERWVFSVDTAQEAATNPQGYQAQKSQKEITSEIAAIIRQITCSVSFMPLLAERCSFDLLVYTDKDVLVPATWEDSDPRLIQQAEEVRLRSVNTKVHKVDTMVAYRMEPAGQG 222
BLAST of EWM29857.1 vs. NCBI_GenBank
Match: gi|551669998|ref|XP_005837757.1| (hypothetical protein GUITHDRAFT_151073 [Guillardia theta CCMP2712] >gi|428181915|gb|EKX50777.1| hypothetical protein GUITHDRAFT_151073 [Guillardia theta CCMP2712]) HSP 1 Score: 243.817 bits (621), Expect = 9.461e-79 Identity = 116/200 (58.00%), Postives = 152/200 (76.00%), Query Frame = 0 Query: 16 APAADNSVITLRGSTDIVVEFFEHAITCILYQRGIYPPEDFERKTKYGLALHVAREEGLVTYLKNVLEQLRQWLTSSNVQKLVVVVTGMESQAVLERWVFSVDTAQEAATNPQGYQAQKSQKEITSEIAAIIRQITCSVSFMPLLAERCSFDLLVYTDKDVLVPATWEDSDPRLIQQAEEVRLRSVNTKVHKVDTMVAYR 215 A AA N+ ITL+GST+IV EFF ++I ILYQRGIYPPE F + KYGL + V + GL YL+ VL QL +WL + NVQKLV+V+T +E+Q VLERW F ++T ++A P+ + +KS+++I +EI AIIRQIT SV+F+PLL + C+FDLLVYTD +V VP TWE+SDP+ I +EVRLRS +TKVHKVD MVAY+ Sbjct: 4 AQAAKNT-ITLKGSTEIVTEFFGYSINSILYQRGIYPPESFAKVNKYGLQMLVTNDSGLQKYLQQVLTQLSEWLYAGNVQKLVLVITSLETQQVLERWNFDIETEKDAVEQPEK-EFEKSERDIMNEIQAIIRQITASVTFLPLLQDACTFDLLVYTDSNVEVPQTWEESDPKYINNQQEVRLRSFSTKVHKVDAMVAYK 201
BLAST of EWM29857.1 vs. NCBI_GenBank
Match: gi|303288706|ref|XP_003063641.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226454709|gb|EEH52014.1| predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 233.032 bits (593), Expect = 2.105e-74 Identity = 116/200 (58.00%), Postives = 151/200 (75.50%), Query Frame = 0 Query: 18 AADNSVITLRGSTDIVVEFFEHAITCILYQRGIYPPEDFERKTKYGLALHVAREEGLVTYLKNVLEQLRQWLTSSNVQKLVVVVTGMESQAVLERWVFSVDTAQEAATNPQGY-QAQKSQKEITSEIAAIIRQITCSVSFMPLLAERCSFDLLVYTDKDVLVPATWEDSDPRLI-QQAEEVRLRSVNTKVHKVDTMVAYR 215 A NS ITL+GST+IV EFF +A+ IL+QRGIYPPE FERK KYGLA+ V+ +E L YL NVL+Q+ WL +QKLV+VVT + S+ VLERWVF+++T +A+ +A+KS+KEI EI+AIIRQIT SV+F+PLL E C+FDLLVYT+ D VP WE+SDPR I + AE+V+LRS +T +HKVD MV+Y+ Sbjct: 7 ATKNS-ITLKGSTEIVSEFFGYAVNSILFQRGIYPPESFERKHKYGLAMLVSTDESLKAYLVNVLQQINDWLMEKKLQKLVLVVTAVGSKEVLERWVFNIETDADASGASGAATRAEKSEKEINQEISAIIRQITASVTFLPLLEEACTFDLLVYTNADSSVPEAWEESDPRYIAENAEQVKLRSFSTSIHKVDGMVSYK 205
BLAST of EWM29857.1 vs. NCBI_GenBank
Match: gi|698776308|ref|XP_009821198.1| (hypothetical protein H257_00293 [Aphanomyces astaci] >gi|574123323|gb|ETV88798.1| hypothetical protein H257_00293 [Aphanomyces astaci]) HSP 1 Score: 230.72 bits (587), Expect = 1.677e-73 Identity = 115/192 (59.90%), Postives = 136/192 (70.83%), Query Frame = 0 Query: 24 ITLRGSTDIVVEFFEHAITCILYQRGIYPPEDFERKTKYGLALHVAREEGLVTYLKNVLEQLRQWLTSSNVQKLVVVVTGMESQAVLERWVFSVDTAQEAATNPQGYQAQKSQKEITSEIAAIIRQITCSVSFMPLLAERCSFDLLVYTDKDVLVPATWEDSDPRLIQQAEEVRLRSVNTKVHKVDTMVAYR 215 ITLRGS +IV EFF +I ILYQRGIYPPE F R +KYGLA+ V +E L YLKNVL+QL WL S VQKLVVVV + +LERW+F V +A K K + SEI AI+RQIT SVSF+PLL + C+FDLLVYTD+DV VP TWE+SDPRL++ + EVRLRS TKVHKVD MVAY+ Sbjct: 15 ITLRGSAEIVTEFFGFSINNILYQRGIYPPESFTRVSKYGLAMVVTADEKLSAYLKNVLDQLAGWLVESQVQKLVVVVANANTDDILERWMFDVYADPPSAHGVNSAAELKPAKVVMSEIQAIMRQITASVSFLPLLNDPCTFDLLVYTDRDVHVPQTWEESDPRLVENSVEVRLRSFTTKVHKVDAMVAYK 206
BLAST of EWM29857.1 vs. NCBI_GenBank
Match: gi|1126203824|ref|XP_019635367.1| (PREDICTED: mitotic spindle assembly checkpoint protein MAD2A-like [Branchiostoma belcheri]) HSP 1 Score: 229.565 bits (584), Expect = 3.886e-73 Identity = 114/198 (57.58%), Postives = 140/198 (70.71%), Query Frame = 0 Query: 18 AADNSVITLRGSTDIVVEFFEHAITCILYQRGIYPPEDFERKTKYGLALHVAREEGLVTYLKNVLEQLRQWLTSSNVQKLVVVVTGMESQAVLERWVFSVDTAQEAATNPQGYQAQKSQKEITSEIAAIIRQITCSVSFMPLLAERCSFDLLVYTDKDVLVPATWEDSDPRLIQQAEEVRLRSVNTKVHKVDTMVAYR 215 AA NS ITL+GS +IV EFF + I ILYQRGIYPPE F R KYGL L V + L TYL NVL QL+ WL V+KLVVVVT +++Q VLERW F ++ + A + + +K KEI EI A+IRQIT SV+F+PLL E CSFDLL+YTDKD+ VP TWE+S P I ++EEVRLRS +T +HKVD MV Y+ Sbjct: 7 AAKNS-ITLKGSAEIVAEFFSYGINSILYQRGIYPPETFSRVQKYGLTLLVTTDNELKTYLNNVLMQLKDWLLDKTVEKLVVVVTSIDTQEVLERWQFDIECDKTMAEDSK--PREKPLKEINDEIKAVIRQITASVTFLPLLEENCSFDLLIYTDKDLEVPETWEESGPHFIAKSEEVRLRSFSTSIHKVDAMVCYK 201
BLAST of EWM29857.1 vs. NCBI_GenBank
Match: gi|1160570633|ref|XP_020435224.1| (DNA-binding HORMA domain-containing protein [Polysphondylium pallidum PN500] >gi|281208932|gb|EFA83107.1| DNA-binding HORMA domain-containing protein [Polysphondylium pallidum PN500]) HSP 1 Score: 229.565 bits (584), Expect = 4.103e-73 Identity = 111/198 (56.06%), Postives = 143/198 (72.22%), Query Frame = 0 Query: 19 ADNSVITLRGSTDIVVEFFEHAITCILYQRGIYPPEDFERKTKYGLALHVAREEGLVTYLKNVLEQLRQWLTSSNVQKLVVVVTGMESQAVLERWVFSVDTAQEAATNPQGYQAQKSQKEITSEIAAIIRQITCSVSFMPLLAERCSFDLLVYTDKDVLVPATWEDSDPRLIQQAEEVRLRSVNTKVHKVDTMVAYRM 216 A + ITL+GSTDIV EFF ++I IL+QRG+YPPE F R KYGL++ V ++GL YL NVL+QL QWL + +VQKLV+V+T + ++ VLERWVF V Q N K +KEI +EI AIIRQIT SV+F+PLL C+FDLLVYT+KD+ VP WE+SDP+ I ++ VRLRS T +HKVDTMVAY++ Sbjct: 6 ATKNNITLKGSTDIVTEFFSYSINSILFQRGVYPPETFSRVAKYGLSILVTTDQGLKDYLDNVLKQLSQWLMTGDVQKLVLVITDVVTKDVLERWVFDV---QTDLPNQSEAPRVKPEKEIMNEIQAIIRQITASVTFLPLLPSACTFDLLVYTNKDISVPQKWEESDPQYITNSQHVRLRSFTTTIHKVDTMVAYKL 200
BLAST of EWM29857.1 vs. NCBI_GenBank
Match: gi|675163181|ref|XP_008890475.1| (hypothetical protein PPTG_00751 [Phytophthora parasitica INRA-310] >gi|566033728|gb|ETI56639.1| hypothetical protein F443_00886 [Phytophthora parasitica P1569] >gi|567971463|gb|ETK96471.1| hypothetical protein L915_00827 [Phytophthora parasitica] >gi|567999793|gb|ETL49827.1| hypothetical protein L916_00817 [Phytophthora parasitica] >gi|568028962|gb|ETM02896.1| hypothetical protein L917_00785 [Phytophthora parasitica] >gi|568109803|gb|ETN24410.1| hypothetical protein PPTG_00751 [Phytophthora parasitica INRA-310] >gi|570337437|gb|ETO85385.1| hypothetical protein F444_00894 [Phytophthora parasitica P1976] >gi|570961498|gb|ETP26477.1| hypothetical protein F441_00862 [Phytophthora parasitica CJ01A1] >gi|570998219|gb|ETP54474.1| hypothetical protein F442_00840 [Phytophthora parasitica P10297]) HSP 1 Score: 229.565 bits (584), Expect = 4.383e-73 Identity = 112/194 (57.73%), Postives = 139/194 (71.65%), Query Frame = 0 Query: 22 SVITLRGSTDIVVEFFEHAITCILYQRGIYPPEDFERKTKYGLALHVAREEGLVTYLKNVLEQLRQWLTSSNVQKLVVVVTGMESQAVLERWVFSVDTAQEAATNPQGYQAQKSQKEITSEIAAIIRQITCSVSFMPLLAERCSFDLLVYTDKDVLVPATWEDSDPRLIQQAEEVRLRSVNTKVHKVDTMVAYR 215 +VITL+GST+IV EFF ++I ILYQRGIYP E F++ KYGL + V ++ L + L QL WL VQKLV+V+TG+E+Q VLERW F V A A KS+KEI +EI AIIRQIT SVSF+P+L E+C+FDLLVYTDK+ VPA WE+SDPR I+ + EVRLRS +TKVHKVD MVAY+ Sbjct: 9 NVITLKGSTEIVTEFFSYSINTILYQRGIYPAESFKQVQKYGLNMLVTDDDKLNDFFTKFLHQLSNWLLKGEVQKLVLVITGIETQEVLERWAFEVH-ADNGTGESGNAPASKSKKEIMAEIQAIIRQITASVSFLPILEEQCAFDLLVYTDKNSEVPALWEESDPRYIKDSAEVRLRSFSTKVHKVDAMVAYK 201
BLAST of EWM29857.1 vs. NCBI_GenBank
Match: gi|568059550|gb|ETM56125.1| (hypothetical protein L914_00815 [Phytophthora parasitica]) HSP 1 Score: 229.18 bits (583), Expect = 6.785e-73 Identity = 112/194 (57.73%), Postives = 139/194 (71.65%), Query Frame = 0 Query: 22 SVITLRGSTDIVVEFFEHAITCILYQRGIYPPEDFERKTKYGLALHVAREEGLVTYLKNVLEQLRQWLTSSNVQKLVVVVTGMESQAVLERWVFSVDTAQEAATNPQGYQAQKSQKEITSEIAAIIRQITCSVSFMPLLAERCSFDLLVYTDKDVLVPATWEDSDPRLIQQAEEVRLRSVNTKVHKVDTMVAYR 215 +VITL+GST+IV EFF ++I ILYQRGIYP E F++ KYGL + V ++ L + L QL WL VQKLV+V+TG+E+Q VLERW F V A A KS+KEI +EI AIIRQIT SVSF+P+L E+C+FDLLVYTDK+ VPA WE+SDPR I+ + EVRLRS +TKVHKVD MVAY+ Sbjct: 9 NVITLKGSTEIVTEFFSYSINTILYQRGIYPAESFKQVQKYGLNMLVTDDDKLNDFFTKFLHQLSNWLLKGEVQKLVLVITGIETQEVLERWAFEVH-ADNGTGESGNAPASKSKKEIMAEIQAIIRQITASVSFLPILEEQCAFDLLVYTDKNSEVPALWEESDPRYIRDSAEVRLRSFSTKVHKVDAMVAYK 201
BLAST of EWM29857.1 vs. NCBI_GenBank
Match: gi|301120988|ref|XP_002908221.1| (mitotic spindle checkpoint component mad2 [Phytophthora infestans T30-4] >gi|262103252|gb|EEY61304.1| mitotic spindle checkpoint component mad2 [Phytophthora infestans T30-4]) HSP 1 Score: 228.794 bits (582), Expect = 9.212e-73 Identity = 115/200 (57.50%), Postives = 141/200 (70.50%), Query Frame = 0 Query: 16 APAADNSVITLRGSTDIVVEFFEHAITCILYQRGIYPPEDFERKTKYGLALHVAREEGLVTYLKNVLEQLRQWLTSSNVQKLVVVVTGMESQAVLERWVFSVDTAQEAATNPQGYQAQKSQKEITSEIAAIIRQITCSVSFMPLLAERCSFDLLVYTDKDVLVPATWEDSDPRLIQQAEEVRLRSVNTKVHKVDTMVAYR 215 A A+N +ITL+GST+IV EFF +I ILYQRGIYP E F++ KYGL + V ++ L + L QL WL VQKLV+V+TG+E+Q VLERWVF V A A K +KEI +EI AIIRQIT SVSF+P+L ERC+FDLLVYTDK+ VPA WE+SDPR I+ + EVRLRS +TKVHKVD MVAY+ Sbjct: 4 AQVAEN-IITLKGSTEIVTEFFSCSINTILYQRGIYPAESFKQIQKYGLNMLVTDDDKLSDFFTKFLHQLSNWLLKGEVQKLVLVITGIETQEVLERWVFEVH-ADNGTGESDSTPASKPKKEIMAEIQAIIRQITASVSFLPILEERCAFDLLVYTDKNSEVPALWEESDPRYIKDSAEVRLRSFSTKVHKVDAMVAYK 201
BLAST of EWM29857.1 vs. NCBI_GenBank
Match: gi|260802726|ref|XP_002596243.1| (hypothetical protein BRAFLDRAFT_260671 [Branchiostoma floridae] >gi|229281497|gb|EEN52255.1| hypothetical protein BRAFLDRAFT_260671 [Branchiostoma floridae]) HSP 1 Score: 227.639 bits (579), Expect = 2.112e-72 Identity = 115/200 (57.50%), Postives = 139/200 (69.50%), Query Frame = 0 Query: 18 AADNSVITLRGSTDIVVEFFEHAITCILYQRGIYPPEDFERKTKYGLALHVAREEGLVTYLKNVLEQLRQWLTSSNVQKLVVVVTGMESQAVLERWVFSV--DTAQEAATNPQGYQAQKSQKEITSEIAAIIRQITCSVSFMPLLAERCSFDLLVYTDKDVLVPATWEDSDPRLIQQAEEVRLRSVNTKVHKVDTMVAYR 215 AA NS ITL+GS +IV EFF + I ILYQRGIYPPE F R KYGL L V + L TYL NVL QL+ WL V+KLVVVVT +++Q VLERW F + D + P+ +K KEI EI A+IRQIT SV+F+PLL E CSFDLL+YTDKD+ VP TWE+S P I ++EEVRLRS +T +HKVD MV Y+ Sbjct: 7 AAKNS-ITLKGSAEIVSEFFSYGINSILYQRGIYPPETFSRVQKYGLTLLVTTDNELKTYLNNVLMQLKDWLLDKTVEKLVVVVTSIDTQEVLERWQFDIECDKTMTEDSKPR----EKPLKEINDEIKAVIRQITASVTFLPLLEENCSFDLLIYTDKDLQVPETWEESGPHFIAKSEEVRLRSFSTSIHKVDAMVCYK 201 The following BLAST results are available for this feature:
BLAST of EWM29857.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|