EWM22030.1, cds8627 (CDS) Nannochloropsis gaditana

Overview
NameEWM22030.1
Unique Namecds8627
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:517792..517863 -
Alignment locationKK037249.1:515750..517621 -

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Properties
Property NameValue
Protein idEWM22030.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100052g19.1155.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:517792..517863 -
KK037249.1supercontigKK037249.1:515750..517621 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM22030.1 vs. NCBI_GenBank
Match: gi|585102445|gb|EWM22030.1| (hypothetical protein Naga_100052g19 [Nannochloropsis gaditana])

HSP 1 Score: 1300.42 bits (3364), Expect = 0.000e+0
Identity = 647/647 (100.00%), Postives = 647/647 (100.00%), Query Frame = 0 
Query:    1 MPSKIFFSLISGVALASAGSKGLLRGNTQEDSSRRLSWTNPLLGAHHGAQPAPEEICALKAEVMSPCNMWAFVNGQSLDASMGFGNGPTHSSMALPQNTSSVTLVLKSFCTPFSFPVSAVEGSPVHPMVAAKFDVCGTDVKTDESWVCINHFPEEGSWSSPDFDDSAWPNAVRVEASGLPTGFTYIAGPTESSDDSPHGGWETFCRKTVSLAEDSEEGAEPPPAPLPVEPALPGHPSSPHAWMMNMTVEGNCSLVDVDIHDLSTNFGFLFGLLEEHGHPPVECVLTGHRPSPEHSPTDTTWPCAHIPDPCLFQFVFTGVQAFLTPEIIMQALEDPTFASIFDTRNSSSSEFCQVQSVTIEDQETTPGPDPSSEDVGGSTVNMPQPLDNSENQVSSPEQPQDVDGSSQEGGDASSSTVSSNNQDIVPAEEPNDGSDDSSVSITPAPSAQPTPEPSSEEGNDSSVSITPAPSAQPTPEPTSEGVDDSSVSITPAPSAQPTPEPTSEGVDDSSVSITPADVEEPAVDSPYIPPTPVECGETVTFELGVDGPGILFKLDSANEGDVKVRATTCLESTKADTVVSVYDQKPSEGVEPIASNDDDDTCEVNPTSSTASTTLLDDSSVYIHVANKGAYAGAVSLKVHCGVYDRR 647
            MPSKIFFSLISGVALASAGSKGLLRGNTQEDSSRRLSWTNPLLGAHHGAQPAPEEICALKAEVMSPCNMWAFVNGQSLDASMGFGNGPTHSSMALPQNTSSVTLVLKSFCTPFSFPVSAVEGSPVHPMVAAKFDVCGTDVKTDESWVCINHFPEEGSWSSPDFDDSAWPNAVRVEASGLPTGFTYIAGPTESSDDSPHGGWETFCRKTVSLAEDSEEGAEPPPAPLPVEPALPGHPSSPHAWMMNMTVEGNCSLVDVDIHDLSTNFGFLFGLLEEHGHPPVECVLTGHRPSPEHSPTDTTWPCAHIPDPCLFQFVFTGVQAFLTPEIIMQALEDPTFASIFDTRNSSSSEFCQVQSVTIEDQETTPGPDPSSEDVGGSTVNMPQPLDNSENQVSSPEQPQDVDGSSQEGGDASSSTVSSNNQDIVPAEEPNDGSDDSSVSITPAPSAQPTPEPSSEEGNDSSVSITPAPSAQPTPEPTSEGVDDSSVSITPAPSAQPTPEPTSEGVDDSSVSITPADVEEPAVDSPYIPPTPVECGETVTFELGVDGPGILFKLDSANEGDVKVRATTCLESTKADTVVSVYDQKPSEGVEPIASNDDDDTCEVNPTSSTASTTLLDDSSVYIHVANKGAYAGAVSLKVHCGVYDRR
Sbjct:    1 MPSKIFFSLISGVALASAGSKGLLRGNTQEDSSRRLSWTNPLLGAHHGAQPAPEEICALKAEVMSPCNMWAFVNGQSLDASMGFGNGPTHSSMALPQNTSSVTLVLKSFCTPFSFPVSAVEGSPVHPMVAAKFDVCGTDVKTDESWVCINHFPEEGSWSSPDFDDSAWPNAVRVEASGLPTGFTYIAGPTESSDDSPHGGWETFCRKTVSLAEDSEEGAEPPPAPLPVEPALPGHPSSPHAWMMNMTVEGNCSLVDVDIHDLSTNFGFLFGLLEEHGHPPVECVLTGHRPSPEHSPTDTTWPCAHIPDPCLFQFVFTGVQAFLTPEIIMQALEDPTFASIFDTRNSSSSEFCQVQSVTIEDQETTPGPDPSSEDVGGSTVNMPQPLDNSENQVSSPEQPQDVDGSSQEGGDASSSTVSSNNQDIVPAEEPNDGSDDSSVSITPAPSAQPTPEPSSEEGNDSSVSITPAPSAQPTPEPTSEGVDDSSVSITPAPSAQPTPEPTSEGVDDSSVSITPADVEEPAVDSPYIPPTPVECGETVTFELGVDGPGILFKLDSANEGDVKVRATTCLESTKADTVVSVYDQKPSEGVEPIASNDDDDTCEVNPTSSTASTTLLDDSSVYIHVANKGAYAGAVSLKVHCGVYDRR 647
[Close]
BLAST of EWM22030.1 vs. NCBI_GenBank
Match: gi|585102446|gb|EWM22031.1| (hypothetical protein Naga_100052g19 [Nannochloropsis gaditana])

HSP 1 Score: 1252.65 bits (3240), Expect = 0.000e+0
Identity = 623/623 (100.00%), Postives = 623/623 (100.00%), Query Frame = 0 
Query:   25 RGNTQEDSSRRLSWTNPLLGAHHGAQPAPEEICALKAEVMSPCNMWAFVNGQSLDASMGFGNGPTHSSMALPQNTSSVTLVLKSFCTPFSFPVSAVEGSPVHPMVAAKFDVCGTDVKTDESWVCINHFPEEGSWSSPDFDDSAWPNAVRVEASGLPTGFTYIAGPTESSDDSPHGGWETFCRKTVSLAEDSEEGAEPPPAPLPVEPALPGHPSSPHAWMMNMTVEGNCSLVDVDIHDLSTNFGFLFGLLEEHGHPPVECVLTGHRPSPEHSPTDTTWPCAHIPDPCLFQFVFTGVQAFLTPEIIMQALEDPTFASIFDTRNSSSSEFCQVQSVTIEDQETTPGPDPSSEDVGGSTVNMPQPLDNSENQVSSPEQPQDVDGSSQEGGDASSSTVSSNNQDIVPAEEPNDGSDDSSVSITPAPSAQPTPEPSSEEGNDSSVSITPAPSAQPTPEPTSEGVDDSSVSITPAPSAQPTPEPTSEGVDDSSVSITPADVEEPAVDSPYIPPTPVECGETVTFELGVDGPGILFKLDSANEGDVKVRATTCLESTKADTVVSVYDQKPSEGVEPIASNDDDDTCEVNPTSSTASTTLLDDSSVYIHVANKGAYAGAVSLKVHCGVYDRR 647
            RGNTQEDSSRRLSWTNPLLGAHHGAQPAPEEICALKAEVMSPCNMWAFVNGQSLDASMGFGNGPTHSSMALPQNTSSVTLVLKSFCTPFSFPVSAVEGSPVHPMVAAKFDVCGTDVKTDESWVCINHFPEEGSWSSPDFDDSAWPNAVRVEASGLPTGFTYIAGPTESSDDSPHGGWETFCRKTVSLAEDSEEGAEPPPAPLPVEPALPGHPSSPHAWMMNMTVEGNCSLVDVDIHDLSTNFGFLFGLLEEHGHPPVECVLTGHRPSPEHSPTDTTWPCAHIPDPCLFQFVFTGVQAFLTPEIIMQALEDPTFASIFDTRNSSSSEFCQVQSVTIEDQETTPGPDPSSEDVGGSTVNMPQPLDNSENQVSSPEQPQDVDGSSQEGGDASSSTVSSNNQDIVPAEEPNDGSDDSSVSITPAPSAQPTPEPSSEEGNDSSVSITPAPSAQPTPEPTSEGVDDSSVSITPAPSAQPTPEPTSEGVDDSSVSITPADVEEPAVDSPYIPPTPVECGETVTFELGVDGPGILFKLDSANEGDVKVRATTCLESTKADTVVSVYDQKPSEGVEPIASNDDDDTCEVNPTSSTASTTLLDDSSVYIHVANKGAYAGAVSLKVHCGVYDRR
Sbjct:   11 RGNTQEDSSRRLSWTNPLLGAHHGAQPAPEEICALKAEVMSPCNMWAFVNGQSLDASMGFGNGPTHSSMALPQNTSSVTLVLKSFCTPFSFPVSAVEGSPVHPMVAAKFDVCGTDVKTDESWVCINHFPEEGSWSSPDFDDSAWPNAVRVEASGLPTGFTYIAGPTESSDDSPHGGWETFCRKTVSLAEDSEEGAEPPPAPLPVEPALPGHPSSPHAWMMNMTVEGNCSLVDVDIHDLSTNFGFLFGLLEEHGHPPVECVLTGHRPSPEHSPTDTTWPCAHIPDPCLFQFVFTGVQAFLTPEIIMQALEDPTFASIFDTRNSSSSEFCQVQSVTIEDQETTPGPDPSSEDVGGSTVNMPQPLDNSENQVSSPEQPQDVDGSSQEGGDASSSTVSSNNQDIVPAEEPNDGSDDSSVSITPAPSAQPTPEPSSEEGNDSSVSITPAPSAQPTPEPTSEGVDDSSVSITPAPSAQPTPEPTSEGVDDSSVSITPADVEEPAVDSPYIPPTPVECGETVTFELGVDGPGILFKLDSANEGDVKVRATTCLESTKADTVVSVYDQKPSEGVEPIASNDDDDTCEVNPTSSTASTTLLDDSSVYIHVANKGAYAGAVSLKVHCGVYDRR 633
The following BLAST results are available for this feature:
BLAST of EWM22030.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585102445|gb|EWM22030.1|0.000e+0100.00hypothetical protein Naga_100052g19 [Nannochlorops... [more]
gi|585102446|gb|EWM22031.1|0.000e+0100.00hypothetical protein Naga_100052g19 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8654rna8654Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications