EWM22037.1, cds8623 (CDS) Nannochloropsis gaditana

Overview
NameEWM22037.1
Unique Namecds8623
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:505680..507470 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22037.1
Productphytoene synthase
Orig transcript idgnl|cribi|Naga_100052g15.1162.mrna
GenePSY
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:505680..507470 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR019845Squalene/phytoene_synthase_CS
IPR002060Squ/phyt_synthse
IPR008949Isoprenoid_synthase_dom
Homology
BLAST of EWM22037.1 vs. NCBI_GenBank
Match: gi|585102452|gb|EWM22037.1| (phytoene synthase [Nannochloropsis gaditana])

HSP 1 Score: 1224.92 bits (3168), Expect = 0.000e+0
Identity = 596/596 (100.00%), Postives = 596/596 (100.00%), Query Frame = 0
Query:    1 MGEVTQHQHNDGGEATRRGWSQMDRRDVRSLARRRYRTVTAEAAVVPAAVSSFLWSTTRRRRDASREERAHQGIREGTRPRWRGGAGSKAREALSGHLIFVGLLMVVAAMSWAPLPATAFMSPPSVPAIPRTLATRVIGRRYVASKISAGAGIKSSSKGNGMSSSSAGSPAGNSHHKNNKHPNHHAHSPHSHTAAASPAALQPPKSLMTASSLGSQQASVDTSRSKNTITRAVASTASAGGYVPNSIAPPQPQVSPPAPQAPLTSDAIPPDVLWGESGRMASSGSVGGVELPVDEEHRAALLAEAYAECQRITSIYAKTFYMGTSFLDYAKRSATWAIYVWCRRTDDIVDSPRAIVENTMDADLEQWSKRLDDVWEDRPWDSLDATLCDVRTRYPGMSIEPYRDMIKGMVMDVPGLGQHRYATFEELYLYCYRVAGTVGLMTLPIMGTAPGYSLKQATEPALALGIALQLTNILRDVGEDAMRGRIYLPLEDLARFSVTEDQIMNKIMNSNYRELIKFQIARARVYFDRAEEGIPMLSPDARLPVRSSLDMYREILNRIEDNDYDNFRHRAYVSKFEKLLILPLSWMKTLDWGRRR 596
            MGEVTQHQHNDGGEATRRGWSQMDRRDVRSLARRRYRTVTAEAAVVPAAVSSFLWSTTRRRRDASREERAHQGIREGTRPRWRGGAGSKAREALSGHLIFVGLLMVVAAMSWAPLPATAFMSPPSVPAIPRTLATRVIGRRYVASKISAGAGIKSSSKGNGMSSSSAGSPAGNSHHKNNKHPNHHAHSPHSHTAAASPAALQPPKSLMTASSLGSQQASVDTSRSKNTITRAVASTASAGGYVPNSIAPPQPQVSPPAPQAPLTSDAIPPDVLWGESGRMASSGSVGGVELPVDEEHRAALLAEAYAECQRITSIYAKTFYMGTSFLDYAKRSATWAIYVWCRRTDDIVDSPRAIVENTMDADLEQWSKRLDDVWEDRPWDSLDATLCDVRTRYPGMSIEPYRDMIKGMVMDVPGLGQHRYATFEELYLYCYRVAGTVGLMTLPIMGTAPGYSLKQATEPALALGIALQLTNILRDVGEDAMRGRIYLPLEDLARFSVTEDQIMNKIMNSNYRELIKFQIARARVYFDRAEEGIPMLSPDARLPVRSSLDMYREILNRIEDNDYDNFRHRAYVSKFEKLLILPLSWMKTLDWGRRR
Sbjct:    1 MGEVTQHQHNDGGEATRRGWSQMDRRDVRSLARRRYRTVTAEAAVVPAAVSSFLWSTTRRRRDASREERAHQGIREGTRPRWRGGAGSKAREALSGHLIFVGLLMVVAAMSWAPLPATAFMSPPSVPAIPRTLATRVIGRRYVASKISAGAGIKSSSKGNGMSSSSAGSPAGNSHHKNNKHPNHHAHSPHSHTAAASPAALQPPKSLMTASSLGSQQASVDTSRSKNTITRAVASTASAGGYVPNSIAPPQPQVSPPAPQAPLTSDAIPPDVLWGESGRMASSGSVGGVELPVDEEHRAALLAEAYAECQRITSIYAKTFYMGTSFLDYAKRSATWAIYVWCRRTDDIVDSPRAIVENTMDADLEQWSKRLDDVWEDRPWDSLDATLCDVRTRYPGMSIEPYRDMIKGMVMDVPGLGQHRYATFEELYLYCYRVAGTVGLMTLPIMGTAPGYSLKQATEPALALGIALQLTNILRDVGEDAMRGRIYLPLEDLARFSVTEDQIMNKIMNSNYRELIKFQIARARVYFDRAEEGIPMLSPDARLPVRSSLDMYREILNRIEDNDYDNFRHRAYVSKFEKLLILPLSWMKTLDWGRRR 596          
BLAST of EWM22037.1 vs. NCBI_GenBank
Match: gi|298709404|emb|CBJ31337.1| (Phytoene synthase; chloroplast precursor [Ectocarpus siliculosus])

HSP 1 Score: 418.698 bits (1075), Expect = 3.032e-137
Identity = 197/324 (60.80%), Postives = 249/324 (76.85%), Query Frame = 0
Query:  276 ESGRMASSGSVGGVEL---PVDEEHRAALLAEAYAECQRITSIYAKTFYMGTSFLDYAKRSATWAIYVWCRRTDDIVDSPRAIV--ENTMDADLEQWSKRLDDVWEDRPWDSLDATLCDVRTRYPGMSIEPYRDMIKGMVMDVPGLGQHRYATFEELYLYCYRVAGTVGLMTLPIMGTAPGYSLKQATEPALALGIALQLTNILRDVGEDAMRGRIYLPLEDLARFSVTEDQIMNKIMNSNYRELIKFQIARARVYFDRAEEGIPMLSPDARLPVRSSLDMYREILNRIEDNDYDNFRHRAYVSKFEKLLILPLSWMKTLDWGR 594
            ++ +  + G +  +EL   P +   R A+L +AY EC+RIT I+AKTFY+GT F+    R A WAIYVWCRRTDDIVD PRA+V  + +M  DL  W+ RL++VWE +P D+LD  L DVR  YP + I P++DMI GM+MDVPG+G++RY TFEEL LYCYRVAGTVGLM LPI+GTA G S + A  PAL+LGIALQLTNILRDVGEDA+RGRIYLPLEDL +F V  + IMN I++SNY+EL+++QIARAR Y+ +A  GIPMLSP+ RLPV++SLDMY +IL  IE N+YDNFR RAY+SK EKLL LP S+ K+L+ G+
Sbjct:  162 DNAKRLTEGDLENLELAKGPAELSRRRAVLNQAYQECERITGIFAKTFYLGTKFMSPVARKAVWAIYVWCRRTDDIVDGPRAMVRGKKSMQKDLTDWATRLENVWEGKPKDALDLALVDVRENYPSLPIAPFKDMIDGMIMDVPGIGKNRYQTFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLEDLEKFGVDPENIMNGILDSNYKELMRYQIARARFYYKQAARGIPMLSPEGRLPVQASLDMYGKILTAIEGNNYDNFRKRAYISKTEKLLTLPFSYAKSLNPGQ 485          
BLAST of EWM22037.1 vs. NCBI_GenBank
Match: gi|922863116|gb|KOO30611.1| (phytoene synthase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 365.155 bits (936), Expect = 1.710e-118
Identity = 178/324 (54.94%), Postives = 228/324 (70.37%), Query Frame = 0
Query:  275 GESGRMASS------GSVGGVELPVDEEH---RAALLAEAYAECQRITSIYAKTFYMGTSFLDYAKRSATWAIYVWCRRTDDIVDSPRAIVENTMDADLEQWSKRLDDVWEDRPWDSLDATLCDVRTRYPGMSIEPYRDMIKGMVMDVPGLGQHRYATFEELYLYCYRVAGTVGLMTLPIMGTAPGYSLKQATEPALALGIALQLTNILRDVGEDAMRGRIYLPLEDLARFSVTEDQIMNKIMNSNYRELIKFQIARARVYFDRAEEGIPMLSPDARLPVRSSLDMYREILNRIEDNDYDNFRHRAYVSKFEKLLILPLSWMKT 589
            G +GR  SS      GS+  +    D E    R  LL E+Y  C+ IT+ YAKTFY GT F    KR A +AIY WCRRTDDIVD PR     ++  +L +W +RL DVW  R  D LD  L D   +YP ++IEP+ DMIKGMVMD   L Q+R+A F+ELYLYCYRVAGTVGLM +P+MGTAPG S ++A EPALALG+ LQLTNILRDVGED +R RIYLP EDL RF V+E  ++  + +  Y  LIKFQI RAR ++ +AE+GIP+L+PD +LP+R+SLDMY  IL++IE+N+YDNF  RAY +K EKL++LP ++++ 
Sbjct:   39 GAAGRGGSSSNAVLPGSIAALLATGDAEQLQRREKLLDESYEACRVITAHYAKTFYFGTKFFSEEKRRAVFAIYAWCRRTDDIVDKPRKET-VSLRRELSEWGRRLRDVWNGRAHDLLDLALVDTVQKYPELTIEPFEDMIKGMVMD---LDQNRFANFDELYLYCYRVAGTVGLMMMPVMGTAPGVSFEKALEPALALGVGLQLTNILRDVGEDRVRQRIYLPQEDLRRFGVSEASLLKGVKDEKYVALIKFQIQRARDWYKKAEDGIPLLAPDCQLPIRASLDMYSSILDKIEENNYDNFNKRAYTTKLEKLMMLPRAYLRV 358          
BLAST of EWM22037.1 vs. NCBI_GenBank
Match: gi|972821503|dbj|BAU24764.1| (phytoene synthase [Euglena gracilis])

HSP 1 Score: 362.459 bits (929), Expect = 7.170e-117
Identity = 175/299 (58.53%), Postives = 227/299 (75.92%), Query Frame = 0
Query:  299 AALLAEAYAECQRITSIYAKTFYMGTSFLDYAKRSATWAIYVWCRRTDDIVDSPRAIVENT-MDADLEQWSKRLDDVWEDRPWDSLDATLCDVRTRYPGMSIEPYRDMIKGMVMDVPGLGQHRYATFEELYLYCYRVAGTVGLMTLPIMGTAPGYSLKQATEPALALGIALQLTNILRDVGEDAM-RGRIYLPLEDLARFSVTEDQIMNKIMNSNYRELIKFQIARARVYFDRAEEGIPMLSPDARLPVRSSLDMYREILNRIEDNDYDNFRHRAYVSKFEKLLILPLSWMKTLDWGRR 595
            A  + EAY E ++I + YAKTFY+G+ F    KR A WA+YVWCRRTD+IVD P    + T + ADL +W +RLD +++ +  D+LD  L +    +PG   +PY DMI+GM MD+P +GQ RY T+++LYLYCYRVA TVGLMTLP+MG  PGY+ +QA  PA+ALGIALQ+TNILRDVGED   RGRIYLPLED+ARF VTEDQI  +I++ NYR L++F+I RAR Y+  A+ GIPML+P+AR+PV+SSLD+Y +IL+ IE NDYDNFR RAYVS + KL+ LPLSW++T  WG +
Sbjct:  110 AQAVEEAYNEVEKIMAHYAKTFYLGSKFFPLKKRKAIWAVYVWCRRTDEIVDGPTVSKDPTKLLADLREWEQRLDLMFDGKAVDALDYALAESLKVFPGKK-QPYYDMIEGMRMDLPVVGQQRYQTWDDLYLYCYRVASTVGLMTLPVMGLTPGYTFEQAEPPAVALGIALQITNILRDVGEDYRDRGRIYLPLEDMARFGVTEDQIQAEIVDENYRALMRFEIQRARDYYALAKTGIPMLAPEARMPVQSSLDLYSQILDSIERNDYDNFRQRAYVSNWNKLVTLPLSWLRT--WGLK 405          
BLAST of EWM22037.1 vs. NCBI_GenBank
Match: gi|1189385813|gb|OSX72961.1| (hypothetical protein BU14_0392s0019 [Porphyra umbilicalis])

HSP 1 Score: 363.229 bits (931), Expect = 2.026e-115
Identity = 183/307 (59.61%), Postives = 223/307 (72.64%), Query Frame = 0
Query:  297 HRAALLAEAYAECQRITSIYAKTFYMGTSFLDYAKRSATWAIYVWCRRTDDIVDSPRAIVE-NTMDADLEQWSKRLDDVW----------EDR--PWDSLDATLCDVRTRYPGMSIEPYRDMIKGMVMDVPGLGQHRYATFEELYLYCYRVAGTVGLMTLPIMGTAPGY--SLKQATEPALALGIALQLTNILRDVGEDAMRGRIYLPLEDLARFSVTEDQIMNKIMNSNYRELIKFQIARARVYFDRAEEGIPMLSPDARLPVRSSLDMYREILNRIEDNDYDNFRHRAYVSKFEKLLILPLSWMK 588
             R A++A+AY EC+RIT++YAKTFY+GTSFLD AKRSA WA+Y WCRRTDD+VD PR      ++   L  WS RLD ++          +D   P D+LD  L DV  RYP M I P+ DMI GM+MDV      R+AT++EL+LYCYRVAGTVGLMTLPIMG+  G    L+ A EPALALG+ALQLTNILRDVGED +RGRIYLPLEDL RF+ +E  ++  +++  YR L+KFQIARAR YF +AE GI +LSPDARLPVR+SLDMY  IL  +E N YDNF+ RAYVSK+ KL  LP SW +
Sbjct:  209 RRQAIIAKAYEECERITALYAKTFYLGTSFLDPAKRSAVWAVYTWCRRTDDLVDGPRVTQRCGSLRDVLAGWSTRLDSIFAAGRGAREGEQDVAPPRDALDLALVDVIVRYPDMDITPFADMIDGMIMDVE---MDRFATWDELHLYCYRVAGTVGLMTLPIMGSVDGTRAGLRAAAEPALALGVALQLTNILRDVGEDRLRGRIYLPLEDLQRFNYSEADLLAGVLDDRYRALMKFQIARARAYFAKAEAGIDLLSPDARLPVRASLDMYAGILEVLETNGYDNFKRRAYVSKWGKLATLPGSWAR 512          
BLAST of EWM22037.1 vs. NCBI_GenBank
Match: gi|676392179|ref|XP_009039367.1| (hypothetical protein AURANDRAFT_30247 [Aureococcus anophagefferens] >gi|323449939|gb|EGB05823.1| hypothetical protein AURANDRAFT_30247 [Aureococcus anophagefferens])

HSP 1 Score: 355.14 bits (910), Expect = 1.413e-114
Identity = 177/302 (58.61%), Postives = 217/302 (71.85%), Query Frame = 0
Query:  294 DEEHRAALLAEAYAECQRITSIYAKTFYMGTSFLDYAKRSATWAIYVWCRRTDDIVDSPRAIV--ENTMDADLEQWSKRLDDVWEDRPWDSLDATLCDVRTRYPGMSIEPYRDMIKGMVMDVPG--LGQHRYATFEELYLYCYRVAGTVGLMTLPIMGTAPGYSLKQATEPALALGIALQLTNILRDVGEDAMRGRIYLPLEDLARFSVTEDQIMNKIMNSNYRELIKFQIARARVYFDRAEEGIPMLSPDARLPVRSSLDMYREILNRIEDNDYDNFRHRAYVSKFEKLLILPLSWMKTLD 591
            D     A L  AY  C  IT I++KTFY GT+F   +K++A WAIYVWCRRTDDIVDSP A +     M  DL  W +RLD +W   P D+LD  L D + RYP + + PY DMI GM+MD PG  + Q RY T+EELYLYCYRVAGTVGLM LP++G A GY+L+++  P L+LGIA Q+TNILRDVGEDA+RGRIYLP ED+A+F VTE QIM+ I++ NY+ LIKF+I RA  Y+  A  GIPML P ARL V  +L++YR IL ++E+NDYDNFR RAYVSK EK L+LP SWM   D
Sbjct:   68 DPAKYGAELRNAYQRCGEITKIFSKTFYFGTTFFSESKKTAVWAIYVWCRRTDDIVDSPLAAMLGPERMTEDLRLWKERLDKIWVGEPTDALDLALADAKRRYPDLDMAPYVDMIDGMLMDTPGHEIFQDRYETWEELYLYCYRVAGTVGLMVLPVLGCAEGYTLEESIPPGLSLGIAFQITNILRDVGEDALRGRIYLPREDMAKFGVTEKQIMDGIVDDNYKNLIKFEIDRAEAYYVEARTGIPMLDPQARLAVEVALNVYRGILRKLEENDYDNFRKRAYVSKPEKFLMLPQSWMNVKD 369          
BLAST of EWM22037.1 vs. NCBI_GenBank
Match: gi|544213820|ref|XP_005537057.1| (phytoene synthase [Cyanidioschyzon merolae strain 10D] >gi|449017619|dbj|BAM81021.1| phytoene synthase [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 360.147 bits (923), Expect = 4.510e-114
Identity = 175/295 (59.32%), Postives = 216/295 (73.22%), Query Frame = 0
Query:  298 RAALLAEAYAECQRITSIYAKTFYMGTSFLDYAKRSATWAIYVWCRRTDDIVDSPRAIVEN-TMDADLEQWSKRLDDVWEDRPWDSLDATLCDVRTRYPGMSIEPYRDMIKGMVMDVPGLGQHRYATFEELYLYCYRVAGTVGLMTLPIMGTAPGY--SLKQATEPALALGIALQLTNILRDVGEDAMRGRIYLPLEDLARFSVTEDQIMNKIMNSNYRELIKFQIARARVYFDRAEEGIPMLSPDARLPVRSSLDMYREILNRIEDNDYDNFRHRAYVSKFEKLLILPLSWMKT 589
            R  LL +AY EC RITSI+AKTFY+GT FL   KR A WA+YVWCRRTDD+VD PR    + ++   L +W  RL+ VW   P D+LD  L D    YPG+ I+P+RDMI+GM+MDV    + RY TF+ELYLYCYRVAGTVGLM LPI+G  P +  S  +A E ALALGIALQLTNILRDVGEDA+RGR+YLP E++  F  TED++   ++N  Y+ELIKFQIAR R Y+  AE GI  L P ARLP+R+SLDMYR+IL+ IE+ND+DNF  RAYVSK +K L LP+S ++ 
Sbjct:  226 RQRLLQQAYKECGRITSIFAKTFYLGTLFLPKRKRDAIWAVYVWCRRTDDLVDGPRVRQRDASLRQKLSEWESRLEQVWAGYPQDALDLALADTVRNYPGLRIDPFRDMIQGMLMDV---DRARYETFDELYLYCYRVAGTVGLMALPILGVDPEHCKSEAEAVESALALGIALQLTNILRDVGEDALRGRVYLPQEEMRYFGYTEDELFASVVNDRYQELIKFQIARVRAYYRTAECGIAKLHPSARLPIRASLDMYRQILDAIEENDFDNFHRRAYVSKLKKALTLPVSCLRV 517          
BLAST of EWM22037.1 vs. NCBI_GenBank
Match: gi|1210515832|dbj|GAX25355.1| (15-cis-phytoene/all-trans-phytoene synthase [Fistulifera solaris])

HSP 1 Score: 348.977 bits (894), Expect = 8.038e-111
Identity = 169/296 (57.09%), Postives = 220/296 (74.32%), Query Frame = 0
Query:  301 LLAEAYAECQRITSIYAKTFYMGTSFLDYAKRSATWAIYVWCRRTDDIVDSPRAIVENTMDADLEQWSKRLDDVWE-DRPWDSLDATLCDVRTRYPGMSIEPYRDMIKGMVMDVPGLGQHRYATFEELYLYCYRVAGTVGLMTLPIMGTAPGYSLKQATEPALALGIALQLTNILRDVGEDAM-RGRIYLPLEDLARFSVTEDQIMNKIMNSNYRELIKFQIARARVYFDRAEEGIPMLSPDARLPVRSSLDMYREILNRIEDNDYDNFRHRAYVSKFEKLLILPLSWMKTLDWGR 594
            LL++A+ E   +TS +AKTFY+GT  +    + A WA+YVWCRRTD+IVD+PR   E+ +  DL  W  RL+++W+     D  D  L D   RYP + I P+ DMI+GM+MDVPGLGQ RY  F+EL+LYCYRVAGTVGLM+LPI G AP Y+ + A EPAL+LG+A QLTNILRDVGEDA+ R R+YLP EDL RF VTE+QIM + ++ NY EL+KFQIARAR Y++RA  G+ ML+ ++RLPV+ S+D Y +IL++IE+N YD+   RAYV K+EKL I+PLSW +TLD  R
Sbjct:  152 LLSKAFEEAGEVTSAFAKTFYLGTKVMGSEAQRAIWAVYVWCRRTDEIVDAPRENNEDMLH-DLSLWELRLENLWKYGEVVDVYDLCLLDSLVRYPNLDITPFLDMIRGMLMDVPGLGQDRYEKFDELHLYCYRVAGTVGLMSLPIFGCAPDYNDEVAREPALSLGVAFQLTNILRDVGEDAVQRKRVYLPQEDLKRFGVTEEQIMAQRVDENYIELMKFQIARARKYYERARRGVFMLAEESRLPVQVSIDAYGKILDKIEENGYDSLTKRAYVDKWEKLSIVPLSWYRTLDVSR 446          
BLAST of EWM22037.1 vs. NCBI_GenBank
Match: gi|1210524336|dbj|GAX17065.1| (15-cis-phytoene/all-trans-phytoene synthase [Fistulifera solaris])

HSP 1 Score: 347.051 bits (889), Expect = 3.985e-110
Identity = 169/296 (57.09%), Postives = 219/296 (73.99%), Query Frame = 0
Query:  301 LLAEAYAECQRITSIYAKTFYMGTSFLDYAKRSATWAIYVWCRRTDDIVDSPRAIVENTMDADLEQWSKRLDDVW-EDRPWDSLDATLCDVRTRYPGMSIEPYRDMIKGMVMDVPGLGQHRYATFEELYLYCYRVAGTVGLMTLPIMGTAPGYSLKQATEPALALGIALQLTNILRDVGEDAM-RGRIYLPLEDLARFSVTEDQIMNKIMNSNYRELIKFQIARARVYFDRAEEGIPMLSPDARLPVRSSLDMYREILNRIEDNDYDNFRHRAYVSKFEKLLILPLSWMKTLDWGR 594
            LL++A+ E   +TS +AKTFY+GT  +    + A WA+YVWCRRTD+IVD+PR   E+ +  DL  W  RL+++W      D  D  L D   RYP + I P+ DMI+GM+MDVPGLGQ RY  F+EL+LYCYRVAGTVGLM+LPI G AP Y+ + A EPAL+LG+A QLTNILRDVGEDA+ R R+YLP EDL RF VTE+QIM + ++ NY EL+KFQIARAR Y++RA  G+ ML+ ++RLPV+ S+D Y +IL++IE+N YD+   RAYV K+EKL I+PLSW +TLD  R
Sbjct:  154 LLSKAFEEAGEVTSAFAKTFYLGTKVMGSEAQRAIWAVYVWCRRTDEIVDAPRDNNEDMLH-DLSLWELRLENLWMYGEVVDVYDLCLLDSLVRYPNLDITPFLDMIRGMLMDVPGLGQDRYEKFDELHLYCYRVAGTVGLMSLPIFGCAPDYNDEVAREPALSLGVAFQLTNILRDVGEDAVQRKRVYLPQEDLKRFGVTEEQIMAQRVDENYIELMKFQIARARKYYERARRGVFMLAEESRLPVQVSIDAYGKILDKIEENGYDSLTKRAYVDKWEKLSIVPLSWYRTLDVSR 448          
BLAST of EWM22037.1 vs. NCBI_GenBank
Match: gi|219115962|ref|XP_002178776.1| (phytoene synthase [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409543|gb|EEC49474.1| phytoene synthase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 347.821 bits (891), Expect = 9.104e-110
Identity = 166/293 (56.66%), Postives = 218/293 (74.40%), Query Frame = 0
Query:  301 LLAEAYAECQRITSIYAKTFYMGTSFLDYAKRSATWAIYVWCRRTDDIVDSPRAIVENTMDADLEQWSKRLDDVWE-DRPWDSLDATLCDVRTRYPGMSIEPYRDMIKGMVMDVPGLGQHRYATFEELYLYCYRVAGTVGLMTLPIMGTAPGYSLKQATEPALALGIALQLTNILRDVGEDAM-RGRIYLPLEDLARFSVTEDQIMNKIMNSNYRELIKFQIARARVYFDRAEEGIPMLSPDARLPVRSSLDMYREILNRIEDNDYDNFRHRAYVSKFEKLLILPLSWMKTLD 591
            ++A+AY E   +TS +AKTFYMGT  LD   R A WA+YVWCRRTD+IVD+PR   ++ ++ DL  W  RL+ +W+  +  D  D  L D+R +YP + I P+ DMI+GM+MDVP LG  RY  F+EL+LYCYRVAGTVGLM+LP+ G A G++ + A EPAL+LG+A QLTNILRDVGEDA  RGR+YLP EDL RF VTE+QI  + ++ NY  ++KFQIARAR+Y++RA  G+ ML+P++RLPV+SSLD Y  IL++IE N YD+   RAYV K+EKL I+P SW +T D
Sbjct:  196 IMAQAYFESGEVTSAFAKTFYMGTMLLDEPAREAIWAVYVWCRRTDEIVDAPRDDGDDMLE-DLSSWELRLERLWQYGQVQDVFDLCLLDLRIQYPTLDITPFMDMIRGMLMDVPELGVDRYEAFDELHLYCYRVAGTVGLMSLPVFGCADGFNDEVAREPALSLGVAFQLTNILRDVGEDASERGRVYLPQEDLRRFGVTEEQIFAQKVDENYINMMKFQIARARMYYERARRGVFMLAPESRLPVQSSLDAYGRILDKIEANGYDSLTKRAYVDKWEKLSIIPFSWYRTQD 487          
The following BLAST results are available for this feature:
BLAST of EWM22037.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102452|gb|EWM22037.1|0.000e+0100.00phytoene synthase [Nannochloropsis gaditana][more]
gi|298709404|emb|CBJ31337.1|3.032e-13760.80Phytoene synthase; chloroplast precursor [Ectocarp... [more]
gi|922863116|gb|KOO30611.1|1.710e-11854.94phytoene synthase [Chrysochromulina sp. CCMP291][more]
gi|972821503|dbj|BAU24764.1|7.170e-11758.53phytoene synthase [Euglena gracilis][more]
gi|1189385813|gb|OSX72961.1|2.026e-11559.61hypothetical protein BU14_0392s0019 [Porphyra umbi... [more]
gi|676392179|ref|XP_009039367.1|1.413e-11458.61hypothetical protein AURANDRAFT_30247 [Aureococcus... [more]
gi|544213820|ref|XP_005537057.1|4.510e-11459.32phytoene synthase [Cyanidioschyzon merolae strain ... [more]
gi|1210515832|dbj|GAX25355.1|8.038e-11157.0915-cis-phytoene/all-trans-phytoene synthase [Fistu... [more]
gi|1210524336|dbj|GAX17065.1|3.985e-11057.0915-cis-phytoene/all-trans-phytoene synthase [Fistu... [more]
gi|219115962|ref|XP_002178776.1|9.104e-11056.66phytoene synthase [Phaeodactylum tricornutum CCAP ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8650rna8650Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
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Publications