EWM22055.1, cds8620 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22055.1 vs. NCBI_GenBank
Match: gi|585102470|gb|EWM22055.1| (ankyrin repeat-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 702.205 bits (1811), Expect = 0.000e+0 Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0
Query: 1 MLQAESEMEFQEWIKALRSSTESLLVTGAGGDRNTSYTSLSSAESGTSAAGSTTESYSTFAGPMDAGRAAILSQATASFVARVREANPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAMGNLRANQVWEARVPCDLEKPGVEAPREVREAWIRDKYVRKAFLGPSRRTEKEADGVKGQEEPNAVLYAAAIQGDLAKMGWALAHGADVNFANGKERRRTPVHAVCQRGQSLAALAFLVLNGGAVDVVDDDDWSPLDLAMNGVPVAGGGACGIGGAESSEAEGARRQLQLQQQNQLSITSSTAMPLVSYLLSKLELKGS 344
MLQAESEMEFQEWIKALRSSTESLLVTGAGGDRNTSYTSLSSAESGTSAAGSTTESYSTFAGPMDAGRAAILSQATASFVARVREANPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAMGNLRANQVWEARVPCDLEKPGVEAPREVREAWIRDKYVRKAFLGPSRRTEKEADGVKGQEEPNAVLYAAAIQGDLAKMGWALAHGADVNFANGKERRRTPVHAVCQRGQSLAALAFLVLNGGAVDVVDDDDWSPLDLAMNGVPVAGGGACGIGGAESSEAEGARRQLQLQQQNQLSITSSTAMPLVSYLLSKLELKGS
Sbjct: 1 MLQAESEMEFQEWIKALRSSTESLLVTGAGGDRNTSYTSLSSAESGTSAAGSTTESYSTFAGPMDAGRAAILSQATASFVARVREANPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAMGNLRANQVWEARVPCDLEKPGVEAPREVREAWIRDKYVRKAFLGPSRRTEKEADGVKGQEEPNAVLYAAAIQGDLAKMGWALAHGADVNFANGKERRRTPVHAVCQRGQSLAALAFLVLNGGAVDVVDDDDWSPLDLAMNGVPVAGGGACGIGGAESSEAEGARRQLQLQQQNQLSITSSTAMPLVSYLLSKLELKGS 344
BLAST of EWM22055.1 vs. NCBI_GenBank
Match: gi|831789536|ref|XP_012759091.1| (hypothetical protein SAMD00019534_002040 [Acytostelium subglobosum LB1] >gi|735859723|dbj|GAM17029.1| hypothetical protein SAMD00019534_002040 [Acytostelium subglobosum LB1]) HSP 1 Score: 173.326 bits (438), Expect = 5.764e-45 Identity = 102/298 (34.23%), Postives = 160/298 (53.69%), Query Frame = 0
Query: 1 MLQAESEMEFQEWIKALRSSTESLLVTGAGGDRNTSYTSLSSAESGTSAAGSTTESYSTFAGPMDAGRAAILSQATASFVARVREANPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAMGNLRANQVWEARVPCDLEKPGVEAPREVREAWIRDKYVRKAFLGPSRRTEKEADGVKGQEEPNAVLYAAAIQGDLAKMGWALAHGADVNFANGKERRRTPVHAVCQRGQSLAALAFLVLNGGAVDVVDDDDWSPLDLAMNGVPVAGGGACGI 298
+LQAES EW++ +++ST +L+ D+ T TS SS + + S ++ D G S++ + + EAN +CADC P+P+WAS++FG+++CI+CSGIHR LGVH++KVRSL+LD+ L ++M+ +GN N+++EA VP D KP + +VR WIRDKY ++ F+ + E+ N++LY A+ +GD A + +A GAD N + RTP+H Q L L+ NG + D + + L +A + G C I
Sbjct: 364 VLQAESHESLMEWVQVIQNSTATLINNITPKDKTTKSTSTSSPSHSHNTSHSNIGAHHA----DDQGSDNNQSESPLEILRSLDEANTICADCSAPDPEWASINFGSIVCIDCSGIHRGLGVHITKVRSLVLDSIEPELLDMMKCLGNYNVNRIFEANVPIDRVKPSIHNTVDVRSKWIRDKYDKRLFVSFIDQP---------LEDLNSMLYQASSEGDPAYLLELIASGADANHFDPTNMYRTPMHNAVASNQ-YQNLCLLLQNGASPTTQDIEGNTALHIAAD----CGSSICCI 643
BLAST of EWM22055.1 vs. NCBI_GenBank
Match: gi|1207837471|gb|OWK14970.1| (ACAP1 [Cervus elaphus hippelaphus]) HSP 1 Score: 167.162 bits (422), Expect = 1.119e-44 Identity = 115/292 (39.38%), Postives = 153/292 (52.40%), Query Frame = 0
Query: 1 MLQAESEMEFQEWIKALRSSTESLLVTGAGGDRNTSYTSLSSAESGT-SAAGSTTESYSTFAGP--MDAGRAAILSQATASFVARVREANPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAMGNLRANQVWEARVPC-DLEKPGVEAPREVREAWIRDKYVRKAFLG--PSRRTEKEADGVKGQE-EPNAVLY-AAAIQGDLAKMGWALAHGADVNFANGKERRRTPVHAVCQRGQSLAALAFLVLNGGAVDVVDDDDWSPLDLA 284
+LQA+SE Q W+ A++SS + S L + G +G S S GP + GR A+ V V + N C DC+ P P+WAS++ G +CI+CSGIHRSLGVH SKVRSL LD+W L ++M +GN+ NQ++EARV ++KPG R+ +EAWI KYV K FL P R +E + P A+L+ AA L M ALAHGADVN+ NG + TP+ SL A FL+ NG V+ VD+ PL A
Sbjct: 29 LLQADSERLMQLWVSAVQSSIATAF----------SQARLDDSPRGPGQGSGHLAISSSATLGPGGLTRGREPGGVGHVAAQVQSV-DGNAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLDSWEPELVKLMCELGNVVINQIYEARVEAMAVKKPGPSCSRQEKEAWIHAKYVEKKFLTKLPEIRGRREPPSEDLESLHPGALLFRAAGHPPSLPTMADALAHGADVNWVNGGQENATPL-IQATAANSLLACEFLLQNGANVNQVDNRGRGPLHHA 308
BLAST of EWM22055.1 vs. NCBI_GenBank
Match: gi|330798705|ref|XP_003287391.1| (hypothetical protein DICPUDRAFT_97693 [Dictyostelium purpureum] >gi|325082596|gb|EGC36073.1| hypothetical protein DICPUDRAFT_97693 [Dictyostelium purpureum]) HSP 1 Score: 172.17 bits (435), Expect = 2.479e-44 Identity = 84/221 (38.01%), Postives = 124/221 (56.11%), Query Frame = 0
Query: 78 SFVARVREANPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAMGNLRANQVWEARVPCDLEKPGVEAPREVREAWIRDKYVRKAFLGPSRRTEKEADGVKGQEEPNAVLYAAAIQGDLAKMGWALAHGADVNFANGKERRRTPVHAVCQRGQSLAALAFLVLNGGAVDVVDDDDWSPLDLAMNGVPVAGGGACGI 298
S + R+ +N CADC +PDWAS++FG+++CI+CSGIHR LGVH+SKVRSL+LD W L +M +GN + N+++E +VP D +KP EVR WIRDKY ++ F+ R EE N++LY + + + + LA GAD N+ + RTP+H Q + L+ NG D+ DD +PL ++ + +G C I
Sbjct: 498 SLLRRINASNSFCADCNAKDPDWASINFGSIVCIDCSGIHRGLGVHISKVRSLVLDKWEPELLGMMRCIGNEKVNKIFEEKVPNDRKKPTPNDSFEVRARWIRDKYDKRIFVNYYERP---------IEEINSILYHISGESNTGYILELLAKGADPNYKDSHHHNRTPLHNAVFHNQP-QNVCLLIQNGAFTDIQDDHGDTPLHVSAD----SGSSNCCI 704
BLAST of EWM22055.1 vs. NCBI_GenBank
Match: gi|470244596|ref|XP_004356030.1| (ankyrin repeat-containing protein [Dictyostelium fasciculatum] >gi|328869168|gb|EGG17546.1| ankyrin repeat-containing protein [Dictyostelium fasciculatum]) HSP 1 Score: 171.4 bits (433), Expect = 4.365e-44 Identity = 99/288 (34.38%), Postives = 152/288 (52.78%), Query Frame = 0
Query: 1 MLQAESEMEFQEWIKALRSSTESLLVTGAGGDRNTSYTSLSSAESGTSAAGSTTESYSTFAGPMDAGRAAILSQATASFVAR-VREANPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAMGNLRANQVWEARVPCDLEKPGVEAPREVREAWIRDKYVRKAFLGPSRRTEKEADGVKGQEEPNAVLYAAAIQGDLAKMGWALAHGADVN---FANGKERRRTPVHAVCQRGQSLAALAFLVLNGGAVDVVDDDDWSPLDLA 284
+LQA+S+ EWI+ +++ST +LL + D + + L + SG + A + S S + I T + R + +N VC DC +PDWAS++FG+++CI+CSGIHR LGVH++KVRSL+LD W L +M+ +GN R N+++E+ VP D KP + +VR WIRDKY ++ F+ R EE N +LY AA + + + +A GAD N G +TP+H QS + L+ NG +D + + L +A
Sbjct: 412 ILQADSQESMMEWIQVIQNSTANLLNNISPKDSKPT-SKLQTTTSGNNIAITCNNSNSQYNL---MNNVIIDDNDTPLTILRSLDPSNTVCCDCNAKDPDWASINFGSIVCIDCSGIHRGLGVHITKVRSLVLDKWEPELLNMMKCIGNERVNKIFESNVPVDRVKPTINNTFDVRSRWIRDKYDKRLFVSFIERP---------LEELNKMLYKAAGESNTFLLLELIASGADPNSLALDQGSNSFKTPLHNAVVNAQS-QNMCMLIQNGAQSSTLDSNGNTGLHIA 685
BLAST of EWM22055.1 vs. NCBI_GenBank
Match: gi|942201419|ref|XP_014352622.1| (PREDICTED: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2-like [Latimeria chalumnae]) HSP 1 Score: 166.007 bits (419), Expect = 2.898e-43 Identity = 112/287 (39.02%), Postives = 153/287 (53.31%), Query Frame = 0
Query: 1 MLQAESEMEFQEWIKALRSSTESLLVTGAGGDRNTSYTSLSSAESGTSAAGSTTESYSTFAGPMDAGRAAILSQATASFVARVREANPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAMGNLRANQVWEAR--VPCDLEKPGVEAPREVREAWIRDKYVRKAFLGPSRRT----------EKEADGVKGQE-EPNAVLYAAAIQGDLAKMGWALAHGADVNFANGKERRRTPVHAVCQRGQSLAALAFLVLNGGAVDVVD 274
MLQA+SE W++A++SS +T+Y S E S+ S + G R + + AR N C DC R +P WAS++ G V+CIECSGIHRSLGVHVSKVRSL LD+W L +V+ +GN N ++E+R D+ K ++PR V+E+WI+ KYV K F+ RRT + AD + E P LY AA++GDL M ALAHGADVN+ N +E +TP+ + G SL + FL+ NG V+ D
Sbjct: 147 MLQADSESLRHAWVQAVQSSI------------DTAYRERSDLEPPEMKRSSSAASLKS--GSPTPARESSPKVSGVLQTARRVPGNSWCCDCGREDPRWASINLGVVLCIECSGIHRSLGVHVSKVRSLTLDSWEPELLKVICGLGNDVINSIYESRWEETGDV-KAAADSPRLVKESWIKSKYVEKKFV--KRRTTAASEGHTHGDSAADTLDPSELHPGMRLYRAALEGDLPSMAEALAHGADVNWVNKEEDGKTPL-IISTCGGSLVSSEFLLQNGANVNYRD 415
BLAST of EWM22055.1 vs. NCBI_GenBank
Match: gi|1013946794|gb|KYR00466.1| (ankyrin repeat-containing protein [Dictyostelium lacteum]) HSP 1 Score: 166.777 bits (421), Expect = 2.137e-42 Identity = 83/221 (37.56%), Postives = 129/221 (58.37%), Query Frame = 0
Query: 78 SFVARVREANPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAMGNLRANQVWEARVPCDLEKPGVEAPREVREAWIRDKYVRKAFLGPSRRTEKEADGVKGQEEPNAVLYAAAIQGDLAKMGWALAHGADVNFANGKERRRTPVHAVCQRGQSLAALAFLVLNGGAVDVVDDDDWSPLDLAMNGVPVAGGGACGI 298
+ + RV +N C DC +P WAS++FG+++CI+CSGIHR LGVH+SKVRSL LD W L +M+++GN + N+++E VP +KP EVR WIRDKY R+ F+ S ++ ++ N++LY A + + + + LA GAD N+ N + +TP+H ++ Q+ + + L+ NG +D VD + SPL A + +G C I
Sbjct: 492 TLLRRVNPSNQFCCDCSAKDPVWASINFGSILCIDCSGIHRGLGVHISKVRSLALDKWEPELLGMMKSIGNDKVNKIYEESVPEGRKKPTSNDTFEVRSKWIRDKYDRRLFVNFSDQS---------LDQLNSILYHIAGESNTSYLLELLAQGADPNYQNPERSGKTPLHHALEKNQT-SNVCLLLQNGAYIDTVDQNGNSPLHTASD----SGSADCCI 698
BLAST of EWM22055.1 vs. NCBI_GenBank
Match: gi|754342257|ref|XP_004365526.2| (stromal membrane-associated GTPase-activating protein 2 [Capsaspora owczarzaki ATCC 30864] >gi|765548492|gb|KJE89113.1| stromal membrane-associated GTPase-activating protein 2 [Capsaspora owczarzaki ATCC 30864]) HSP 1 Score: 165.622 bits (418), Expect = 1.049e-41 Identity = 105/285 (36.84%), Postives = 146/285 (51.23%), Query Frame = 0
Query: 1 MLQAESEMEFQEWIKALRSSTESLLVTGAGGDRNTSYTSLSSAESGTSAAGSTTESYSTFAGPMDAGRAAILSQATASFVARVREANPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAMGNLRANQVWEARVPCDLEKPGVEAPREVREAWIRDKYVRKAFLGPSRRTEKEAD-GVKGQEEPNAVLYAAAIQGDLAKMGWALAHGADVNFANGKERRRTPVHAVCQRGQSLAALAFLVLNGGAVDVVDDDDWSPLDLA 284
QAES + EWI A++ N+ SL+S +S + S+ M G+ ++ QA V + E+N CADC PDWAS++ G V+CIECSGIHRSLGVH+SKVRS+ LD W + VM+ GN AN +WE +P + KP + PR RE +IR KY RK F+ R E+E D GQ+ LY AA DLA+ +A GA VN+ + + +TP+HA G + + L+ N + D D + P+ A
Sbjct: 837 FFQAESYDDMTEWITAIQ---------------NSILFSLNSNQSDKTRRTSS----------MKEGQKSVTGQAALDAVW-LNESNKHCADCGTANPDWASINLGIVVCIECSGIHRSLGVHISKVRSVTLDDWSSEMIAVMQESGNATANAIWEVDLPPTVRKPTPDTPRAPREEFIRAKYERKQFI----RQERETDSNTLGQQ-----LYIAASTDDLARTLEFIALGAKVNYVHAGQSCKTPLHAAAAAGYA-CVVEILLQNNANPTLTDSDGYPPMHYA 1085
BLAST of EWM22055.1 vs. NCBI_GenBank
Match: gi|597752253|ref|XP_007237989.1| (PREDICTED: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-like [Astyanax mexicanus]) HSP 1 Score: 162.155 bits (409), Expect = 4.024e-41 Identity = 88/189 (46.56%), Postives = 119/189 (62.96%), Query Frame = 0
Query: 87 NPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAMGNLRANQVWEARVPCD-LEKPGVEAPREVREAWIRDKYVRKAFLGPSRRTEKEADGVKGQEEPNAVLYAAAIQGDLAKMGWALAHGADVNFANGKERRRTPVHAVCQRGQSLAALAFLVLNGGAVDVVD 274
N C DC EP WASV+ G +CIECSGIHRSLGVH+SKVRSL LD+W +++ +GN N ++E PCD +EKP ++PR+VRE WIR KYV ++F+ +R + AD G+++ A LY AA+ G+L M ALA GA+VN++N + R + A G SL A FL+ NG V+ D
Sbjct: 347 NNRCCDCGEAEPRWASVNLGITVCIECSGIHRSLGVHLSKVRSLTLDSWDPEQLKLLCVLGNDVINSIYECG-PCDGVEKPSPQSPRQVREVWIRKKYVERSFV---KRDSEPADAEAGRQQAGARLYQAALDGELVCMARALAQGAEVNWSNAEAGRTALIGAAI--GGSLLACEFLLQNGANVNYRD 529
BLAST of EWM22055.1 vs. NCBI_GenBank
Match: gi|958767494|ref|XP_014716996.1| (PREDICTED: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 isoform X2 [Equus asinus] >gi|958767497|ref|XP_014716997.1| PREDICTED: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 isoform X2 [Equus asinus]) HSP 1 Score: 160.614 bits (405), Expect = 1.389e-40 Identity = 116/324 (35.80%), Postives = 154/324 (47.53%), Query Frame = 0
Query: 1 MLQAESEMEFQEWIKALRSSTESLLVTGA------GGDRNTSYTSLSSAESGTSAAGSTTESYSTFAGPMDAGRAAILSQATASFVARVREANPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAMGNLRANQVWEARVPC-DLEKPGVEAPREVREAWIRDKYVRKAFL------------------------GPSRRTEKEADGVK--------GQEEPNAVLY-AAAIQGDLAKMGWALAHGADVNFANGKERRRTPVHAVCQRGQSLAALAFLVLNGGAVDVVDDDDWSPLDLA 284
+LQA+SE Q WI A++SS + G + + + ++ SA T G TT P G A Q+ + N C DC+ P P+WAS++ G +CI+CSGIHRSLGVH SKVRSL LD+W L ++M +GN+ NQ++EARV ++KPG R+ +EAWI KYV K FL PS R + G K G P A+L+ AA L M ALAHGADVN+ NG + TP+ SL A FL+ NG V+ D+ PL A
Sbjct: 265 LLQADSERLLQLWINAVQSSIATAFSQAHLDDSPRGSVQGSGHLAIGSA--ATMGCGGTTRGRE----PGGVGHVAAQVQSV--------DGNAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLDSWEPELVKLMCELGNVVINQIYEARVEAMAVKKPGPSCSRQEKEAWIHAKYVEKKFLTKLPEIRGRRGGRGPPRGQPPVPPKPSIRPRPGSFGSKPEPPSDDLGSLHPGALLFRAAGHPPSLPTMADALAHGADVNWVNGGQENATPL-IQATAANSLLACEFLLQNGANVNQADNHGRGPLHHA 573 The following BLAST results are available for this feature:
BLAST of EWM22055.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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