EWM22055.1, cds8620 (CDS) Nannochloropsis gaditana

Overview
NameEWM22055.1
Unique Namecds8620
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:497574..498608 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22055.1
Productankyrin repeat-containing protein
Orig transcript idgnl|cribi|Naga_100052g11.1180.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:497574..498608 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0030234enzyme regulator activity
GO:0005488binding
GO:0005096GTPase activator activity
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR020683Ankyrin_rpt-contain_dom
IPR001164ArfGAP
Homology
BLAST of EWM22055.1 vs. NCBI_GenBank
Match: gi|585102470|gb|EWM22055.1| (ankyrin repeat-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 702.205 bits (1811), Expect = 0.000e+0
Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0
Query:    1 MLQAESEMEFQEWIKALRSSTESLLVTGAGGDRNTSYTSLSSAESGTSAAGSTTESYSTFAGPMDAGRAAILSQATASFVARVREANPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAMGNLRANQVWEARVPCDLEKPGVEAPREVREAWIRDKYVRKAFLGPSRRTEKEADGVKGQEEPNAVLYAAAIQGDLAKMGWALAHGADVNFANGKERRRTPVHAVCQRGQSLAALAFLVLNGGAVDVVDDDDWSPLDLAMNGVPVAGGGACGIGGAESSEAEGARRQLQLQQQNQLSITSSTAMPLVSYLLSKLELKGS 344
            MLQAESEMEFQEWIKALRSSTESLLVTGAGGDRNTSYTSLSSAESGTSAAGSTTESYSTFAGPMDAGRAAILSQATASFVARVREANPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAMGNLRANQVWEARVPCDLEKPGVEAPREVREAWIRDKYVRKAFLGPSRRTEKEADGVKGQEEPNAVLYAAAIQGDLAKMGWALAHGADVNFANGKERRRTPVHAVCQRGQSLAALAFLVLNGGAVDVVDDDDWSPLDLAMNGVPVAGGGACGIGGAESSEAEGARRQLQLQQQNQLSITSSTAMPLVSYLLSKLELKGS
Sbjct:    1 MLQAESEMEFQEWIKALRSSTESLLVTGAGGDRNTSYTSLSSAESGTSAAGSTTESYSTFAGPMDAGRAAILSQATASFVARVREANPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAMGNLRANQVWEARVPCDLEKPGVEAPREVREAWIRDKYVRKAFLGPSRRTEKEADGVKGQEEPNAVLYAAAIQGDLAKMGWALAHGADVNFANGKERRRTPVHAVCQRGQSLAALAFLVLNGGAVDVVDDDDWSPLDLAMNGVPVAGGGACGIGGAESSEAEGARRQLQLQQQNQLSITSSTAMPLVSYLLSKLELKGS 344          
BLAST of EWM22055.1 vs. NCBI_GenBank
Match: gi|831789536|ref|XP_012759091.1| (hypothetical protein SAMD00019534_002040 [Acytostelium subglobosum LB1] >gi|735859723|dbj|GAM17029.1| hypothetical protein SAMD00019534_002040 [Acytostelium subglobosum LB1])

HSP 1 Score: 173.326 bits (438), Expect = 5.764e-45
Identity = 102/298 (34.23%), Postives = 160/298 (53.69%), Query Frame = 0
Query:    1 MLQAESEMEFQEWIKALRSSTESLLVTGAGGDRNTSYTSLSSAESGTSAAGSTTESYSTFAGPMDAGRAAILSQATASFVARVREANPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAMGNLRANQVWEARVPCDLEKPGVEAPREVREAWIRDKYVRKAFLGPSRRTEKEADGVKGQEEPNAVLYAAAIQGDLAKMGWALAHGADVNFANGKERRRTPVHAVCQRGQSLAALAFLVLNGGAVDVVDDDDWSPLDLAMNGVPVAGGGACGI 298
            +LQAES     EW++ +++ST +L+      D+ T  TS SS     + + S   ++       D G     S++    +  + EAN +CADC  P+P+WAS++FG+++CI+CSGIHR LGVH++KVRSL+LD+    L ++M+ +GN   N+++EA VP D  KP +    +VR  WIRDKY ++ F+    +           E+ N++LY A+ +GD A +   +A GAD N  +     RTP+H      Q    L  L+ NG +    D +  + L +A +     G   C I
Sbjct:  364 VLQAESHESLMEWVQVIQNSTATLINNITPKDKTTKSTSTSSPSHSHNTSHSNIGAHHA----DDQGSDNNQSESPLEILRSLDEANTICADCSAPDPEWASINFGSIVCIDCSGIHRGLGVHITKVRSLVLDSIEPELLDMMKCLGNYNVNRIFEANVPIDRVKPSIHNTVDVRSKWIRDKYDKRLFVSFIDQP---------LEDLNSMLYQASSEGDPAYLLELIASGADANHFDPTNMYRTPMHNAVASNQ-YQNLCLLLQNGASPTTQDIEGNTALHIAAD----CGSSICCI 643          
BLAST of EWM22055.1 vs. NCBI_GenBank
Match: gi|1207837471|gb|OWK14970.1| (ACAP1 [Cervus elaphus hippelaphus])

HSP 1 Score: 167.162 bits (422), Expect = 1.119e-44
Identity = 115/292 (39.38%), Postives = 153/292 (52.40%), Query Frame = 0
Query:    1 MLQAESEMEFQEWIKALRSSTESLLVTGAGGDRNTSYTSLSSAESGT-SAAGSTTESYSTFAGP--MDAGRAAILSQATASFVARVREANPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAMGNLRANQVWEARVPC-DLEKPGVEAPREVREAWIRDKYVRKAFLG--PSRRTEKEADGVKGQE-EPNAVLY-AAAIQGDLAKMGWALAHGADVNFANGKERRRTPVHAVCQRGQSLAALAFLVLNGGAVDVVDDDDWSPLDLA 284
            +LQA+SE   Q W+ A++SS  +            S   L  +  G    +G    S S   GP  +  GR        A+ V  V + N  C DC+ P P+WAS++ G  +CI+CSGIHRSLGVH SKVRSL LD+W   L ++M  +GN+  NQ++EARV    ++KPG    R+ +EAWI  KYV K FL   P  R  +E      +   P A+L+ AA     L  M  ALAHGADVN+ NG +   TP+        SL A  FL+ NG  V+ VD+    PL  A
Sbjct:   29 LLQADSERLMQLWVSAVQSSIATAF----------SQARLDDSPRGPGQGSGHLAISSSATLGPGGLTRGREPGGVGHVAAQVQSV-DGNAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLDSWEPELVKLMCELGNVVINQIYEARVEAMAVKKPGPSCSRQEKEAWIHAKYVEKKFLTKLPEIRGRREPPSEDLESLHPGALLFRAAGHPPSLPTMADALAHGADVNWVNGGQENATPL-IQATAANSLLACEFLLQNGANVNQVDNRGRGPLHHA 308          
BLAST of EWM22055.1 vs. NCBI_GenBank
Match: gi|330798705|ref|XP_003287391.1| (hypothetical protein DICPUDRAFT_97693 [Dictyostelium purpureum] >gi|325082596|gb|EGC36073.1| hypothetical protein DICPUDRAFT_97693 [Dictyostelium purpureum])

HSP 1 Score: 172.17 bits (435), Expect = 2.479e-44
Identity = 84/221 (38.01%), Postives = 124/221 (56.11%), Query Frame = 0
Query:   78 SFVARVREANPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAMGNLRANQVWEARVPCDLEKPGVEAPREVREAWIRDKYVRKAFLGPSRRTEKEADGVKGQEEPNAVLYAAAIQGDLAKMGWALAHGADVNFANGKERRRTPVHAVCQRGQSLAALAFLVLNGGAVDVVDDDDWSPLDLAMNGVPVAGGGACGI 298
            S + R+  +N  CADC   +PDWAS++FG+++CI+CSGIHR LGVH+SKVRSL+LD W   L  +M  +GN + N+++E +VP D +KP      EVR  WIRDKY ++ F+    R           EE N++LY  + + +   +   LA GAD N+ +     RTP+H      Q    +  L+ NG   D+ DD   +PL ++ +    +G   C I
Sbjct:  498 SLLRRINASNSFCADCNAKDPDWASINFGSIVCIDCSGIHRGLGVHISKVRSLVLDKWEPELLGMMRCIGNEKVNKIFEEKVPNDRKKPTPNDSFEVRARWIRDKYDKRIFVNYYERP---------IEEINSILYHISGESNTGYILELLAKGADPNYKDSHHHNRTPLHNAVFHNQP-QNVCLLIQNGAFTDIQDDHGDTPLHVSAD----SGSSNCCI 704          
BLAST of EWM22055.1 vs. NCBI_GenBank
Match: gi|470244596|ref|XP_004356030.1| (ankyrin repeat-containing protein [Dictyostelium fasciculatum] >gi|328869168|gb|EGG17546.1| ankyrin repeat-containing protein [Dictyostelium fasciculatum])

HSP 1 Score: 171.4 bits (433), Expect = 4.365e-44
Identity = 99/288 (34.38%), Postives = 152/288 (52.78%), Query Frame = 0
Query:    1 MLQAESEMEFQEWIKALRSSTESLLVTGAGGDRNTSYTSLSSAESGTSAAGSTTESYSTFAGPMDAGRAAILSQATASFVAR-VREANPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAMGNLRANQVWEARVPCDLEKPGVEAPREVREAWIRDKYVRKAFLGPSRRTEKEADGVKGQEEPNAVLYAAAIQGDLAKMGWALAHGADVN---FANGKERRRTPVHAVCQRGQSLAALAFLVLNGGAVDVVDDDDWSPLDLA 284
            +LQA+S+    EWI+ +++ST +LL   +  D   + + L +  SG + A +   S S +          I    T   + R +  +N VC DC   +PDWAS++FG+++CI+CSGIHR LGVH++KVRSL+LD W   L  +M+ +GN R N+++E+ VP D  KP +    +VR  WIRDKY ++ F+    R           EE N +LY AA + +   +   +A GAD N      G    +TP+H      QS   +  L+ NG     +D +  + L +A
Sbjct:  412 ILQADSQESMMEWIQVIQNSTANLLNNISPKDSKPT-SKLQTTTSGNNIAITCNNSNSQYNL---MNNVIIDDNDTPLTILRSLDPSNTVCCDCNAKDPDWASINFGSIVCIDCSGIHRGLGVHITKVRSLVLDKWEPELLNMMKCIGNERVNKIFESNVPVDRVKPTINNTFDVRSRWIRDKYDKRLFVSFIERP---------LEELNKMLYKAAGESNTFLLLELIASGADPNSLALDQGSNSFKTPLHNAVVNAQS-QNMCMLIQNGAQSSTLDSNGNTGLHIA 685          
BLAST of EWM22055.1 vs. NCBI_GenBank
Match: gi|942201419|ref|XP_014352622.1| (PREDICTED: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2-like [Latimeria chalumnae])

HSP 1 Score: 166.007 bits (419), Expect = 2.898e-43
Identity = 112/287 (39.02%), Postives = 153/287 (53.31%), Query Frame = 0
Query:    1 MLQAESEMEFQEWIKALRSSTESLLVTGAGGDRNTSYTSLSSAESGTSAAGSTTESYSTFAGPMDAGRAAILSQATASFVARVREANPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAMGNLRANQVWEAR--VPCDLEKPGVEAPREVREAWIRDKYVRKAFLGPSRRT----------EKEADGVKGQE-EPNAVLYAAAIQGDLAKMGWALAHGADVNFANGKERRRTPVHAVCQRGQSLAALAFLVLNGGAVDVVD 274
            MLQA+SE     W++A++SS             +T+Y   S  E       S+  S  +  G     R +    +     AR    N  C DC R +P WAS++ G V+CIECSGIHRSLGVHVSKVRSL LD+W   L +V+  +GN   N ++E+R     D+ K   ++PR V+E+WI+ KYV K F+   RRT          +  AD +   E  P   LY AA++GDL  M  ALAHGADVN+ N +E  +TP+  +   G SL +  FL+ NG  V+  D
Sbjct:  147 MLQADSESLRHAWVQAVQSSI------------DTAYRERSDLEPPEMKRSSSAASLKS--GSPTPARESSPKVSGVLQTARRVPGNSWCCDCGREDPRWASINLGVVLCIECSGIHRSLGVHVSKVRSLTLDSWEPELLKVICGLGNDVINSIYESRWEETGDV-KAAADSPRLVKESWIKSKYVEKKFV--KRRTTAASEGHTHGDSAADTLDPSELHPGMRLYRAALEGDLPSMAEALAHGADVNWVNKEEDGKTPL-IISTCGGSLVSSEFLLQNGANVNYRD 415          
BLAST of EWM22055.1 vs. NCBI_GenBank
Match: gi|1013946794|gb|KYR00466.1| (ankyrin repeat-containing protein [Dictyostelium lacteum])

HSP 1 Score: 166.777 bits (421), Expect = 2.137e-42
Identity = 83/221 (37.56%), Postives = 129/221 (58.37%), Query Frame = 0
Query:   78 SFVARVREANPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAMGNLRANQVWEARVPCDLEKPGVEAPREVREAWIRDKYVRKAFLGPSRRTEKEADGVKGQEEPNAVLYAAAIQGDLAKMGWALAHGADVNFANGKERRRTPVHAVCQRGQSLAALAFLVLNGGAVDVVDDDDWSPLDLAMNGVPVAGGGACGI 298
            + + RV  +N  C DC   +P WAS++FG+++CI+CSGIHR LGVH+SKVRSL LD W   L  +M+++GN + N+++E  VP   +KP      EVR  WIRDKY R+ F+  S ++          ++ N++LY  A + + + +   LA GAD N+ N +   +TP+H   ++ Q+ + +  L+ NG  +D VD +  SPL  A +    +G   C I
Sbjct:  492 TLLRRVNPSNQFCCDCSAKDPVWASINFGSILCIDCSGIHRGLGVHISKVRSLALDKWEPELLGMMKSIGNDKVNKIYEESVPEGRKKPTSNDTFEVRSKWIRDKYDRRLFVNFSDQS---------LDQLNSILYHIAGESNTSYLLELLAQGADPNYQNPERSGKTPLHHALEKNQT-SNVCLLLQNGAYIDTVDQNGNSPLHTASD----SGSADCCI 698          
BLAST of EWM22055.1 vs. NCBI_GenBank
Match: gi|754342257|ref|XP_004365526.2| (stromal membrane-associated GTPase-activating protein 2 [Capsaspora owczarzaki ATCC 30864] >gi|765548492|gb|KJE89113.1| stromal membrane-associated GTPase-activating protein 2 [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 165.622 bits (418), Expect = 1.049e-41
Identity = 105/285 (36.84%), Postives = 146/285 (51.23%), Query Frame = 0
Query:    1 MLQAESEMEFQEWIKALRSSTESLLVTGAGGDRNTSYTSLSSAESGTSAAGSTTESYSTFAGPMDAGRAAILSQATASFVARVREANPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAMGNLRANQVWEARVPCDLEKPGVEAPREVREAWIRDKYVRKAFLGPSRRTEKEAD-GVKGQEEPNAVLYAAAIQGDLAKMGWALAHGADVNFANGKERRRTPVHAVCQRGQSLAALAFLVLNGGAVDVVDDDDWSPLDLA 284
              QAES  +  EWI A++               N+   SL+S +S  +   S+          M  G+ ++  QA    V  + E+N  CADC    PDWAS++ G V+CIECSGIHRSLGVH+SKVRS+ LD W   +  VM+  GN  AN +WE  +P  + KP  + PR  RE +IR KY RK F+    R E+E D    GQ+     LY AA   DLA+    +A GA VN+ +  +  +TP+HA    G +   +  L+ N     + D D + P+  A
Sbjct:  837 FFQAESYDDMTEWITAIQ---------------NSILFSLNSNQSDKTRRTSS----------MKEGQKSVTGQAALDAVW-LNESNKHCADCGTANPDWASINLGIVVCIECSGIHRSLGVHISKVRSVTLDDWSSEMIAVMQESGNATANAIWEVDLPPTVRKPTPDTPRAPREEFIRAKYERKQFI----RQERETDSNTLGQQ-----LYIAASTDDLARTLEFIALGAKVNYVHAGQSCKTPLHAAAAAGYA-CVVEILLQNNANPTLTDSDGYPPMHYA 1085          
BLAST of EWM22055.1 vs. NCBI_GenBank
Match: gi|597752253|ref|XP_007237989.1| (PREDICTED: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-like [Astyanax mexicanus])

HSP 1 Score: 162.155 bits (409), Expect = 4.024e-41
Identity = 88/189 (46.56%), Postives = 119/189 (62.96%), Query Frame = 0
Query:   87 NPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAMGNLRANQVWEARVPCD-LEKPGVEAPREVREAWIRDKYVRKAFLGPSRRTEKEADGVKGQEEPNAVLYAAAIQGDLAKMGWALAHGADVNFANGKERRRTPVHAVCQRGQSLAALAFLVLNGGAVDVVD 274
            N  C DC   EP WASV+ G  +CIECSGIHRSLGVH+SKVRSL LD+W     +++  +GN   N ++E   PCD +EKP  ++PR+VRE WIR KYV ++F+   +R  + AD   G+++  A LY AA+ G+L  M  ALA GA+VN++N +  R   + A    G SL A  FL+ NG  V+  D
Sbjct:  347 NNRCCDCGEAEPRWASVNLGITVCIECSGIHRSLGVHLSKVRSLTLDSWDPEQLKLLCVLGNDVINSIYECG-PCDGVEKPSPQSPRQVREVWIRKKYVERSFV---KRDSEPADAEAGRQQAGARLYQAALDGELVCMARALAQGAEVNWSNAEAGRTALIGAAI--GGSLLACEFLLQNGANVNYRD 529          
BLAST of EWM22055.1 vs. NCBI_GenBank
Match: gi|958767494|ref|XP_014716996.1| (PREDICTED: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 isoform X2 [Equus asinus] >gi|958767497|ref|XP_014716997.1| PREDICTED: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 isoform X2 [Equus asinus])

HSP 1 Score: 160.614 bits (405), Expect = 1.389e-40
Identity = 116/324 (35.80%), Postives = 154/324 (47.53%), Query Frame = 0
Query:    1 MLQAESEMEFQEWIKALRSSTESLLVTGA------GGDRNTSYTSLSSAESGTSAAGSTTESYSTFAGPMDAGRAAILSQATASFVARVREANPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAMGNLRANQVWEARVPC-DLEKPGVEAPREVREAWIRDKYVRKAFL------------------------GPSRRTEKEADGVK--------GQEEPNAVLY-AAAIQGDLAKMGWALAHGADVNFANGKERRRTPVHAVCQRGQSLAALAFLVLNGGAVDVVDDDDWSPLDLA 284
            +LQA+SE   Q WI A++SS  +            G  + + + ++ SA   T   G TT        P   G  A   Q+         + N  C DC+ P P+WAS++ G  +CI+CSGIHRSLGVH SKVRSL LD+W   L ++M  +GN+  NQ++EARV    ++KPG    R+ +EAWI  KYV K FL                         PS R    + G K        G   P A+L+ AA     L  M  ALAHGADVN+ NG +   TP+        SL A  FL+ NG  V+  D+    PL  A
Sbjct:  265 LLQADSERLLQLWINAVQSSIATAFSQAHLDDSPRGSVQGSGHLAIGSA--ATMGCGGTTRGRE----PGGVGHVAAQVQSV--------DGNAQCCDCREPAPEWASINLGVTLCIQCSGIHRSLGVHFSKVRSLTLDSWEPELVKLMCELGNVVINQIYEARVEAMAVKKPGPSCSRQEKEAWIHAKYVEKKFLTKLPEIRGRRGGRGPPRGQPPVPPKPSIRPRPGSFGSKPEPPSDDLGSLHPGALLFRAAGHPPSLPTMADALAHGADVNWVNGGQENATPL-IQATAANSLLACEFLLQNGANVNQADNHGRGPLHHA 573          
The following BLAST results are available for this feature:
BLAST of EWM22055.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102470|gb|EWM22055.1|0.000e+0100.00ankyrin repeat-containing protein [Nannochloropsis... [more]
gi|831789536|ref|XP_012759091.1|5.764e-4534.23hypothetical protein SAMD00019534_002040 [Acytoste... [more]
gi|1207837471|gb|OWK14970.1|1.119e-4439.38ACAP1 [Cervus elaphus hippelaphus][more]
gi|330798705|ref|XP_003287391.1|2.479e-4438.01hypothetical protein DICPUDRAFT_97693 [Dictyosteli... [more]
gi|470244596|ref|XP_004356030.1|4.365e-4434.38ankyrin repeat-containing protein [Dictyostelium f... [more]
gi|942201419|ref|XP_014352622.1|2.898e-4339.02PREDICTED: arf-GAP with coiled-coil, ANK repeat an... [more]
gi|1013946794|gb|KYR00466.1|2.137e-4237.56ankyrin repeat-containing protein [Dictyostelium l... [more]
gi|754342257|ref|XP_004365526.2|1.049e-4136.84stromal membrane-associated GTPase-activating prot... [more]
gi|597752253|ref|XP_007237989.1|4.024e-4146.56PREDICTED: arf-GAP with coiled-coil, ANK repeat an... [more]
gi|958767494|ref|XP_014716996.1|1.389e-4035.80PREDICTED: arf-GAP with coiled-coil, ANK repeat an... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8647rna8647Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications