EWM22040.1, cds8619 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22040.1 vs. NCBI_GenBank
Match: gi|585102455|gb|EWM22040.1| (Peptidase S24/S26A/S26B/S26C, beta-ribbon domain protein [Nannochloropsis gaditana]) HSP 1 Score: 371.703 bits (953), Expect = 2.630e-130 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0
Query: 1 MVTTGRFSAFASSGNVRRLLSTLSFLPVGVAVNELIGSFMFVDGRSMHPTLNPAYSGSYTSSRDLVFVAKWPIKVWRRYRKGDVVVLRSPVDPDVEVIRRLTGREREWRTRRVGMRQEPIPEGFCWVTGDNPLYSEDSETYGPVPLALIEGWVAYVVWPLNRVGPVPKRVIQAPHAQRMPPQDL 184
MVTTGRFSAFASSGNVRRLLSTLSFLPVGVAVNELIGSFMFVDGRSMHPTLNPAYSGSYTSSRDLVFVAKWPIKVWRRYRKGDVVVLRSPVDPDVEVIRRLTGREREWRTRRVGMRQEPIPEGFCWVTGDNPLYSEDSETYGPVPLALIEGWVAYVVWPLNRVGPVPKRVIQAPHAQRMPPQDL
Sbjct: 1 MVTTGRFSAFASSGNVRRLLSTLSFLPVGVAVNELIGSFMFVDGRSMHPTLNPAYSGSYTSSRDLVFVAKWPIKVWRRYRKGDVVVLRSPVDPDVEVIRRLTGREREWRTRRVGMRQEPIPEGFCWVTGDNPLYSEDSETYGPVPLALIEGWVAYVVWPLNRVGPVPKRVIQAPHAQRMPPQDL 184
BLAST of EWM22040.1 vs. NCBI_GenBank
Match: gi|545370227|ref|XP_005649773.1| (LexA/Signal peptidase [Coccomyxa subellipsoidea C-169] >gi|384251752|gb|EIE25229.1| LexA/Signal peptidase [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 133.65 bits (335), Expect = 2.373e-36 Identity = 72/156 (46.15%), Postives = 98/156 (62.82%), Query Frame = 0
Query: 16 VRRLLSTLSFLPVGVAVNELIGSFMFVDGRSMHPTLNPAYSGSYTSSRDLVFVAKWPIKVWRRYRKGDVVVLRSPVDPDVEVIRRLTGREREWRTRRVGMRQEPIPEGFCWVTGDNPLYSEDSET-YGPVPLALIEGWVAYVVWPLNRVGPVPKRV 170
++ + T +PV +AV +L+ +V GRSM PTLNP + + DLV KW IK++R Y +GDVV+LRSP DPD+ +I+RL E +W T + IP+G CWV GDNP +S DS + +GPVP+ALIEG V Y+ WP +R G V V
Sbjct: 2 IKTVWRTAKLVPVVIAVEDLLYGPAYVSGRSMQPTLNPESA----TGHDLVLADKWSIKLYR-YNRGDVVLLRSPEDPDMTLIKRLLALEGDWVTIPGSLELAKIPKGHCWVEGDNPEFSADSRSKFGPVPVALIEGRVQYIFWPPSRAGRVNSHV 152
BLAST of EWM22040.1 vs. NCBI_GenBank
Match: gi|1173960113|gb|OQS06275.1| (mitochondrial inner membrane protease subunit [Thraustotheca clavata]) HSP 1 Score: 127.487 bits (319), Expect = 6.766e-34 Identity = 65/142 (45.77%), Postives = 93/142 (65.49%), Query Frame = 0
Query: 22 TLSFLPVGVAVNELIGSFMFVDGRSMHPTLNPAYSGSYTSSRDLVFVAKWPIKVWRRYRKGDVVVLRSPVDPDVEVIRRLTGREREWRTRRVGMRQEPIPEGFCWVTGDNPLYSEDSETYGPVPLALIEGWVAYVVWPLNRV 163
L+++P+G+A N L+ SF V+GRSM PTLNP+ + R+LV + K+ ++V R +GDV+VL+SP DP + +RL E +W R G R+ +P G CW+ GDN S+DS ++G VP+ALIE VA VVWPLN +
Sbjct: 29 ALTYIPIGLAFNALVLSFGRVEGRSMQPTLNPS-----DTDRELVLLDKFSVQVAHRVARGDVIVLKSPSDPSELLTKRLIAIEGDWVEGRSG-RRVVVPAGKCWIEGDNGELSDDSNSFGCVPMALIEARVAAVVWPLNHL 164
BLAST of EWM22040.1 vs. NCBI_GenBank
Match: gi|576985092|gb|EUC57835.1| (inner membrane protease subunit 2 [Rhizoctonia solani AG-3 Rhs1AP] >gi|660971042|gb|KEP54731.1| inner membrane protease subunit 2 [Rhizoctonia solani 123E]) HSP 1 Score: 120.553 bits (301), Expect = 2.778e-31 Identity = 67/156 (42.95%), Postives = 92/156 (58.97%), Query Frame = 0
Query: 17 RRLLSTLSFLPVGVAVNELIGSFMFVDGRSMHPTLNPAYSGSYTSSRDLVFVAKWPIKVWRRYRKGDVVVLRSPVDPDVEVIRRLT--GREREWRTRRVGMRQEPIPEGFCWVTGDNPLYSEDSETYGPVPLALIEGWVAYVVWPLNRVGPVPKRV 170
R LL L +P + L+G+ V G SM P LNP G Y RD+V V +W I RYR+GDVV LRSP+DP++ +++R+ G + ++ +P+G+ WV GD P S DS +GPVPL LIE +A V+WP R+GPVP+RV
Sbjct: 5 RELLRLLWIIPPTLTFTSLVGTINVVSGSSMQPALNP--EGPY--QRDIVLVDRWSIVARHRYRRGDVVSLRSPLDPNLIIVKRILALGGDMLETLPPYPDKEVRVPDGYAWVEGDEPFRSRDSNHFGPVPLGLIESRIALVLWPFKRLGPVPQRV 156
BLAST of EWM22040.1 vs. NCBI_GenBank
Match: gi|551661838|ref|XP_005833685.1| (hypothetical protein GUITHDRAFT_86641 [Guillardia theta CCMP2712] >gi|428177827|gb|EKX46705.1| hypothetical protein GUITHDRAFT_86641 [Guillardia theta CCMP2712]) HSP 1 Score: 117.472 bits (293), Expect = 3.854e-30 Identity = 66/158 (41.77%), Postives = 96/158 (60.76%), Query Frame = 0
Query: 15 NVRRLLST----LSFLPVGVAVNELIGSFMFVDGRSMHPTLNPAYSGSYTSSRDLVFVAKWPIKVWRRYRKGDVVVLRSPVDPDVEVIRRLTGREREWRTRRVGMRQEPIPEGFCWVTGDNPLYSEDSETYGPVPLALIEGWVAYVVWPLNRVGPVPK 168
N R L+ T L +PV + VN+ + S ++G SM P LNP S ++RD V + K+ I++ RY++GDV +L+SP P+ +++RL E + + + P+P+GFCW+ GDN S DS+ GPVPLALI G V +V WPLNRVG V +
Sbjct: 3 NFRNLMQTAKHVLFAIPVAITVNDSVVSTACIEGGSMQPVLNPKGS----TTRDRVLLDKFTIRM-ARYKRGDVCLLKSPDKPNSWIVKRLIALEGD-KVKTDSQGIVPVPQGFCWIEGDNEDNSIDSKQLGPVPLALIHGRVTHVFWPLNRVGKVQR 154
BLAST of EWM22040.1 vs. NCBI_GenBank
Match: gi|807758627|ref|XP_012184108.1| (predicted protein [Fibroporia radiculosa] >gi|403418125|emb|CCM04825.1| predicted protein [Fibroporia radiculosa]) HSP 1 Score: 117.472 bits (293), Expect = 1.142e-29 Identity = 70/183 (38.25%), Postives = 104/183 (56.83%), Query Frame = 0
Query: 3 TTGRFSAFASSGNVRRLLSTLSFLPVGVAVNELIGSFMFVDGRSMHPTLNPAYSGSYTSSRDLVFVAKWPIKVWRRYRKGDVVVLRSPVDPDVEVIRRLTGREREWRTR-----RVGMRQEPIPEGFCWVTGDNPLYSEDSETYGPVPLALIEGWVAYVVWPLNRVGPVPKRVIQAPHAQRMP 180
+ G F + +RR L +L +LP+G+ E + + GRSM PTLNP S S RD+V ++ I++ R+Y +GD+V L+SP D + V++R+ + + V +R +P+G WV GD +SEDS T+GPVPLALIE +++VVWPL R GP+ K P+ R P
Sbjct: 11 SCGEF--MKAHQTLRRTLQSLLWLPLGITFVEYFYTLKSIRGRSMQPTLNPDSS----SWRDVVLFDRFAIRILRKYERGDIVALQSPTDSKL-VVKRIVALQGDMVKTLPPYPDVEIR---VPQGHAWVEGDEAFHSEDSNTFGPVPLALIESKLSFVVWPLARYGPIRKPSSPNPNDPRDP 183
BLAST of EWM22040.1 vs. NCBI_GenBank
Match: gi|953494866|emb|CEG43507.1| (RxLR-like protein [Plasmopara halstedii]) HSP 1 Score: 115.931 bits (289), Expect = 1.197e-29 Identity = 65/135 (48.15%), Postives = 82/135 (60.74%), Query Frame = 0
Query: 25 FLPVGVAVNELIGSFMFVDGRSMHPTLNPAYSGSYTSSRDLVFVAKWPIKVWRRYRKGDVVVLRSPVDPDVEVIRRLTGREREWRTRRVGMRQEPIPEGFCWVTGDNPLYSEDSETYGPVPLALIEGWVAYVVWP 159
+LPVGV VN L S V GRSM P LN + RD V + K+ I+V RY +GDVVVL+SP P +I+RL E + T R G +P G CW+ GDNP SEDS+++GPVPLALI+ V V+WP
Sbjct: 13 WLPVGVTVNALGISLASVKGRSMQPVLNDGLTQDVV--RDRVLLDKFSIQVRHRYERGDVVVLKSPESPGQYLIKRLVALEGDLVTDRKG-GHRIVPVGKCWIEGDNPAISEDSDSFGPVPLALIDSRVVAVLWP 144
BLAST of EWM22040.1 vs. NCBI_GenBank
Match: gi|1214711563|gb|OWZ22564.1| (Signal peptidase I [Phytophthora megakarya]) HSP 1 Score: 115.161 bits (287), Expect = 2.939e-29 Identity = 65/135 (48.15%), Postives = 81/135 (60.00%), Query Frame = 0
Query: 25 FLPVGVAVNELIGSFMFVDGRSMHPTLNPAYSGSYTSSRDLVFVAKWPIKVWRRYRKGDVVVLRSPVDPDVEVIRRLTGREREWRTRRVGMRQEPIPEGFCWVTGDNPLYSEDSETYGPVPLALIEGWVAYVVWP 159
+LPVGV VN L S V GRSM P LN + RD V + K +++ RY++GDVVVL SP +I+RL E + T R G R IP G CWV GDNP +S+DS+ +GPVPLALI+ V VVWP
Sbjct: 13 WLPVGVTVNALGVSLASVKGRSMQPELNDGLM--QDAVRDRVLLDKLSVQMRHRYQRGDVVVLESPEAAGQLLIKRLVALEGDLVTDRSG-RSRAIPVGKCWVEGDNPTFSDDSDAFGPVPLALIDSRVVAVVWP 144
BLAST of EWM22040.1 vs. NCBI_GenBank
Match: gi|1173935718|gb|OQR86793.1| (mitochondrial inner membrane protease subunit [Achlya hypogyna]) HSP 1 Score: 114.775 bits (286), Expect = 4.065e-29 Identity = 65/155 (41.94%), Postives = 92/155 (59.35%), Query Frame = 0
Query: 22 TLSFLPVGVAVNELIGSFMFVDGRSMHPTLNPAYSGSYTSSRDLVFVAKWPIKVWRRYRKGDVVVLRSPVDPDVEVIRRLTGREREWRTRRVGMRQEPIPEGFCWVTGDNPLYSEDSETYGPVPLALIEGWVAYVVWPLNRVGPV-----PKRVI 171
L+++PVG+ N L+ S V+GRSM PTLN + RD+V + K+ ++V R +GDVVVL+SP +P + +RL E +W R G R+ +P G CWV GDN S+DS ++G VP+ALIE V VVWPL + + P R+I
Sbjct: 13 ALAWVPVGITFNSLVMSIGRVEGRSMQPTLN-----AEDGDRDIVLLDKFSVQVAHRLVRGDVVVLKSPSEPKEFLTKRLIALEGDWVEGRSG-RRVVVPAGKCWVEGDNAELSDDSNSFGCVPMALIEARVVAVVWPLFHIKRIRNEHPPNRII 161
BLAST of EWM22040.1 vs. NCBI_GenBank
Match: gi|1045913603|gb|OCH90709.1| (LexA/Signal peptidase [Obba rivulosa]) HSP 1 Score: 116.316 bits (290), Expect = 4.291e-29 Identity = 69/166 (41.57%), Postives = 98/166 (59.04%), Query Frame = 0
Query: 9 AFASSGNVRRLLSTLSFLPVGVAVNELIGSFMFVDGRSMHPTLNPAYSGSYTSSRDLVFVAKWPIKVWRRYRKGDVVVLRSPVDPDVEVIRRLTGREREWRTRRVGMRQEP--------IPEGFCWVTGDNPLYSEDSETYGPVPLALIEGWVAYVVWPLNRVGPV 166
AFAS+ +RR +STL +LP + +E S + GRSM PTLNP S + RD+V ++ I+V RYR+GD+V L SP D + +++R+ E + ++ P IPEG WV GD P SEDS +GPVPLALI+ ++++VWP RVGP+
Sbjct: 11 AFASNNVLRRTVSTLIWLPTAIIFSEYCYSIKSIKGRSMQPTLNPDSS----AWRDIVVFDRFSIRVMGRYRRGDIVALLSPSDSKL-IVKRIIALEGD------TVKTLPPYPDTEVRIPEGHAWVEGDEPFRSEDSNWFGPVPLALIDSRLSFIVWPWERVGPL 165 The following BLAST results are available for this feature:
BLAST of EWM22040.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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