EWM22040.1, cds8619 (CDS) Nannochloropsis gaditana

Overview
NameEWM22040.1
Unique Namecds8619
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:496893..497447 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22040.1
ProductPeptidase S24/S26A/S26B/S26C, beta-ribbon domain protein
Orig transcript idgnl|cribi|Naga_100052g10.1165.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:496893..497447 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0008236serine-type peptidase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
GO:0006508proteolysis
Vocabulary: INTERPRO
TermDefinition
IPR015927Peptidase_S24_S26A/B/C
IPR028360Peptidase_S24/S26_b-rbn
IPR000223Pept_S26A_signal_pept_1
Homology
BLAST of EWM22040.1 vs. NCBI_GenBank
Match: gi|585102455|gb|EWM22040.1| (Peptidase S24/S26A/S26B/S26C, beta-ribbon domain protein [Nannochloropsis gaditana])

HSP 1 Score: 371.703 bits (953), Expect = 2.630e-130
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0
Query:    1 MVTTGRFSAFASSGNVRRLLSTLSFLPVGVAVNELIGSFMFVDGRSMHPTLNPAYSGSYTSSRDLVFVAKWPIKVWRRYRKGDVVVLRSPVDPDVEVIRRLTGREREWRTRRVGMRQEPIPEGFCWVTGDNPLYSEDSETYGPVPLALIEGWVAYVVWPLNRVGPVPKRVIQAPHAQRMPPQDL 184
            MVTTGRFSAFASSGNVRRLLSTLSFLPVGVAVNELIGSFMFVDGRSMHPTLNPAYSGSYTSSRDLVFVAKWPIKVWRRYRKGDVVVLRSPVDPDVEVIRRLTGREREWRTRRVGMRQEPIPEGFCWVTGDNPLYSEDSETYGPVPLALIEGWVAYVVWPLNRVGPVPKRVIQAPHAQRMPPQDL
Sbjct:    1 MVTTGRFSAFASSGNVRRLLSTLSFLPVGVAVNELIGSFMFVDGRSMHPTLNPAYSGSYTSSRDLVFVAKWPIKVWRRYRKGDVVVLRSPVDPDVEVIRRLTGREREWRTRRVGMRQEPIPEGFCWVTGDNPLYSEDSETYGPVPLALIEGWVAYVVWPLNRVGPVPKRVIQAPHAQRMPPQDL 184          
BLAST of EWM22040.1 vs. NCBI_GenBank
Match: gi|545370227|ref|XP_005649773.1| (LexA/Signal peptidase [Coccomyxa subellipsoidea C-169] >gi|384251752|gb|EIE25229.1| LexA/Signal peptidase [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 133.65 bits (335), Expect = 2.373e-36
Identity = 72/156 (46.15%), Postives = 98/156 (62.82%), Query Frame = 0
Query:   16 VRRLLSTLSFLPVGVAVNELIGSFMFVDGRSMHPTLNPAYSGSYTSSRDLVFVAKWPIKVWRRYRKGDVVVLRSPVDPDVEVIRRLTGREREWRTRRVGMRQEPIPEGFCWVTGDNPLYSEDSET-YGPVPLALIEGWVAYVVWPLNRVGPVPKRV 170
            ++ +  T   +PV +AV +L+    +V GRSM PTLNP  +    +  DLV   KW IK++R Y +GDVV+LRSP DPD+ +I+RL   E +W T    +    IP+G CWV GDNP +S DS + +GPVP+ALIEG V Y+ WP +R G V   V
Sbjct:    2 IKTVWRTAKLVPVVIAVEDLLYGPAYVSGRSMQPTLNPESA----TGHDLVLADKWSIKLYR-YNRGDVVLLRSPEDPDMTLIKRLLALEGDWVTIPGSLELAKIPKGHCWVEGDNPEFSADSRSKFGPVPVALIEGRVQYIFWPPSRAGRVNSHV 152          
BLAST of EWM22040.1 vs. NCBI_GenBank
Match: gi|1173960113|gb|OQS06275.1| (mitochondrial inner membrane protease subunit [Thraustotheca clavata])

HSP 1 Score: 127.487 bits (319), Expect = 6.766e-34
Identity = 65/142 (45.77%), Postives = 93/142 (65.49%), Query Frame = 0
Query:   22 TLSFLPVGVAVNELIGSFMFVDGRSMHPTLNPAYSGSYTSSRDLVFVAKWPIKVWRRYRKGDVVVLRSPVDPDVEVIRRLTGREREWRTRRVGMRQEPIPEGFCWVTGDNPLYSEDSETYGPVPLALIEGWVAYVVWPLNRV 163
             L+++P+G+A N L+ SF  V+GRSM PTLNP+      + R+LV + K+ ++V  R  +GDV+VL+SP DP   + +RL   E +W   R G R+  +P G CW+ GDN   S+DS ++G VP+ALIE  VA VVWPLN +
Sbjct:   29 ALTYIPIGLAFNALVLSFGRVEGRSMQPTLNPS-----DTDRELVLLDKFSVQVAHRVARGDVIVLKSPSDPSELLTKRLIAIEGDWVEGRSG-RRVVVPAGKCWIEGDNGELSDDSNSFGCVPMALIEARVAAVVWPLNHL 164          
BLAST of EWM22040.1 vs. NCBI_GenBank
Match: gi|576985092|gb|EUC57835.1| (inner membrane protease subunit 2 [Rhizoctonia solani AG-3 Rhs1AP] >gi|660971042|gb|KEP54731.1| inner membrane protease subunit 2 [Rhizoctonia solani 123E])

HSP 1 Score: 120.553 bits (301), Expect = 2.778e-31
Identity = 67/156 (42.95%), Postives = 92/156 (58.97%), Query Frame = 0
Query:   17 RRLLSTLSFLPVGVAVNELIGSFMFVDGRSMHPTLNPAYSGSYTSSRDLVFVAKWPIKVWRRYRKGDVVVLRSPVDPDVEVIRRLT--GREREWRTRRVGMRQEPIPEGFCWVTGDNPLYSEDSETYGPVPLALIEGWVAYVVWPLNRVGPVPKRV 170
            R LL  L  +P  +    L+G+   V G SM P LNP   G Y   RD+V V +W I    RYR+GDVV LRSP+DP++ +++R+   G +          ++  +P+G+ WV GD P  S DS  +GPVPL LIE  +A V+WP  R+GPVP+RV
Sbjct:    5 RELLRLLWIIPPTLTFTSLVGTINVVSGSSMQPALNP--EGPY--QRDIVLVDRWSIVARHRYRRGDVVSLRSPLDPNLIIVKRILALGGDMLETLPPYPDKEVRVPDGYAWVEGDEPFRSRDSNHFGPVPLGLIESRIALVLWPFKRLGPVPQRV 156          
BLAST of EWM22040.1 vs. NCBI_GenBank
Match: gi|551661838|ref|XP_005833685.1| (hypothetical protein GUITHDRAFT_86641 [Guillardia theta CCMP2712] >gi|428177827|gb|EKX46705.1| hypothetical protein GUITHDRAFT_86641 [Guillardia theta CCMP2712])

HSP 1 Score: 117.472 bits (293), Expect = 3.854e-30
Identity = 66/158 (41.77%), Postives = 96/158 (60.76%), Query Frame = 0
Query:   15 NVRRLLST----LSFLPVGVAVNELIGSFMFVDGRSMHPTLNPAYSGSYTSSRDLVFVAKWPIKVWRRYRKGDVVVLRSPVDPDVEVIRRLTGREREWRTRRVGMRQEPIPEGFCWVTGDNPLYSEDSETYGPVPLALIEGWVAYVVWPLNRVGPVPK 168
            N R L+ T    L  +PV + VN+ + S   ++G SM P LNP  S    ++RD V + K+ I++  RY++GDV +L+SP  P+  +++RL   E + + +       P+P+GFCW+ GDN   S DS+  GPVPLALI G V +V WPLNRVG V +
Sbjct:    3 NFRNLMQTAKHVLFAIPVAITVNDSVVSTACIEGGSMQPVLNPKGS----TTRDRVLLDKFTIRM-ARYKRGDVCLLKSPDKPNSWIVKRLIALEGD-KVKTDSQGIVPVPQGFCWIEGDNEDNSIDSKQLGPVPLALIHGRVTHVFWPLNRVGKVQR 154          
BLAST of EWM22040.1 vs. NCBI_GenBank
Match: gi|807758627|ref|XP_012184108.1| (predicted protein [Fibroporia radiculosa] >gi|403418125|emb|CCM04825.1| predicted protein [Fibroporia radiculosa])

HSP 1 Score: 117.472 bits (293), Expect = 1.142e-29
Identity = 70/183 (38.25%), Postives = 104/183 (56.83%), Query Frame = 0
Query:    3 TTGRFSAFASSGNVRRLLSTLSFLPVGVAVNELIGSFMFVDGRSMHPTLNPAYSGSYTSSRDLVFVAKWPIKVWRRYRKGDVVVLRSPVDPDVEVIRRLTGREREWRTR-----RVGMRQEPIPEGFCWVTGDNPLYSEDSETYGPVPLALIEGWVAYVVWPLNRVGPVPKRVIQAPHAQRMP 180
            + G F    +   +RR L +L +LP+G+   E   +   + GRSM PTLNP  S    S RD+V   ++ I++ R+Y +GD+V L+SP D  + V++R+   + +          V +R   +P+G  WV GD   +SEDS T+GPVPLALIE  +++VVWPL R GP+ K     P+  R P
Sbjct:   11 SCGEF--MKAHQTLRRTLQSLLWLPLGITFVEYFYTLKSIRGRSMQPTLNPDSS----SWRDVVLFDRFAIRILRKYERGDIVALQSPTDSKL-VVKRIVALQGDMVKTLPPYPDVEIR---VPQGHAWVEGDEAFHSEDSNTFGPVPLALIESKLSFVVWPLARYGPIRKPSSPNPNDPRDP 183          
BLAST of EWM22040.1 vs. NCBI_GenBank
Match: gi|953494866|emb|CEG43507.1| (RxLR-like protein [Plasmopara halstedii])

HSP 1 Score: 115.931 bits (289), Expect = 1.197e-29
Identity = 65/135 (48.15%), Postives = 82/135 (60.74%), Query Frame = 0
Query:   25 FLPVGVAVNELIGSFMFVDGRSMHPTLNPAYSGSYTSSRDLVFVAKWPIKVWRRYRKGDVVVLRSPVDPDVEVIRRLTGREREWRTRRVGMRQEPIPEGFCWVTGDNPLYSEDSETYGPVPLALIEGWVAYVVWP 159
            +LPVGV VN L  S   V GRSM P LN   +      RD V + K+ I+V  RY +GDVVVL+SP  P   +I+RL   E +  T R G     +P G CW+ GDNP  SEDS+++GPVPLALI+  V  V+WP
Sbjct:   13 WLPVGVTVNALGISLASVKGRSMQPVLNDGLTQDVV--RDRVLLDKFSIQVRHRYERGDVVVLKSPESPGQYLIKRLVALEGDLVTDRKG-GHRIVPVGKCWIEGDNPAISEDSDSFGPVPLALIDSRVVAVLWP 144          
BLAST of EWM22040.1 vs. NCBI_GenBank
Match: gi|1214711563|gb|OWZ22564.1| (Signal peptidase I [Phytophthora megakarya])

HSP 1 Score: 115.161 bits (287), Expect = 2.939e-29
Identity = 65/135 (48.15%), Postives = 81/135 (60.00%), Query Frame = 0
Query:   25 FLPVGVAVNELIGSFMFVDGRSMHPTLNPAYSGSYTSSRDLVFVAKWPIKVWRRYRKGDVVVLRSPVDPDVEVIRRLTGREREWRTRRVGMRQEPIPEGFCWVTGDNPLYSEDSETYGPVPLALIEGWVAYVVWP 159
            +LPVGV VN L  S   V GRSM P LN        + RD V + K  +++  RY++GDVVVL SP      +I+RL   E +  T R G R   IP G CWV GDNP +S+DS+ +GPVPLALI+  V  VVWP
Sbjct:   13 WLPVGVTVNALGVSLASVKGRSMQPELNDGLM--QDAVRDRVLLDKLSVQMRHRYQRGDVVVLESPEAAGQLLIKRLVALEGDLVTDRSG-RSRAIPVGKCWVEGDNPTFSDDSDAFGPVPLALIDSRVVAVVWP 144          
BLAST of EWM22040.1 vs. NCBI_GenBank
Match: gi|1173935718|gb|OQR86793.1| (mitochondrial inner membrane protease subunit [Achlya hypogyna])

HSP 1 Score: 114.775 bits (286), Expect = 4.065e-29
Identity = 65/155 (41.94%), Postives = 92/155 (59.35%), Query Frame = 0
Query:   22 TLSFLPVGVAVNELIGSFMFVDGRSMHPTLNPAYSGSYTSSRDLVFVAKWPIKVWRRYRKGDVVVLRSPVDPDVEVIRRLTGREREWRTRRVGMRQEPIPEGFCWVTGDNPLYSEDSETYGPVPLALIEGWVAYVVWPLNRVGPV-----PKRVI 171
             L+++PVG+  N L+ S   V+GRSM PTLN     +    RD+V + K+ ++V  R  +GDVVVL+SP +P   + +RL   E +W   R G R+  +P G CWV GDN   S+DS ++G VP+ALIE  V  VVWPL  +  +     P R+I
Sbjct:   13 ALAWVPVGITFNSLVMSIGRVEGRSMQPTLN-----AEDGDRDIVLLDKFSVQVAHRLVRGDVVVLKSPSEPKEFLTKRLIALEGDWVEGRSG-RRVVVPAGKCWVEGDNAELSDDSNSFGCVPMALIEARVVAVVWPLFHIKRIRNEHPPNRII 161          
BLAST of EWM22040.1 vs. NCBI_GenBank
Match: gi|1045913603|gb|OCH90709.1| (LexA/Signal peptidase [Obba rivulosa])

HSP 1 Score: 116.316 bits (290), Expect = 4.291e-29
Identity = 69/166 (41.57%), Postives = 98/166 (59.04%), Query Frame = 0
Query:    9 AFASSGNVRRLLSTLSFLPVGVAVNELIGSFMFVDGRSMHPTLNPAYSGSYTSSRDLVFVAKWPIKVWRRYRKGDVVVLRSPVDPDVEVIRRLTGREREWRTRRVGMRQEP--------IPEGFCWVTGDNPLYSEDSETYGPVPLALIEGWVAYVVWPLNRVGPV 166
            AFAS+  +RR +STL +LP  +  +E   S   + GRSM PTLNP  S    + RD+V   ++ I+V  RYR+GD+V L SP D  + +++R+   E +       ++  P        IPEG  WV GD P  SEDS  +GPVPLALI+  ++++VWP  RVGP+
Sbjct:   11 AFASNNVLRRTVSTLIWLPTAIIFSEYCYSIKSIKGRSMQPTLNPDSS----AWRDIVVFDRFSIRVMGRYRRGDIVALLSPSDSKL-IVKRIIALEGD------TVKTLPPYPDTEVRIPEGHAWVEGDEPFRSEDSNWFGPVPLALIDSRLSFIVWPWERVGPL 165          
The following BLAST results are available for this feature:
BLAST of EWM22040.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102455|gb|EWM22040.1|2.630e-130100.00Peptidase S24/S26A/S26B/S26C, beta-ribbon domain p... [more]
gi|545370227|ref|XP_005649773.1|2.373e-3646.15LexA/Signal peptidase [Coccomyxa subellipsoidea C-... [more]
gi|1173960113|gb|OQS06275.1|6.766e-3445.77mitochondrial inner membrane protease subunit [Thr... [more]
gi|576985092|gb|EUC57835.1|2.778e-3142.95inner membrane protease subunit 2 [Rhizoctonia sol... [more]
gi|551661838|ref|XP_005833685.1|3.854e-3041.77hypothetical protein GUITHDRAFT_86641 [Guillardia ... [more]
gi|807758627|ref|XP_012184108.1|1.142e-2938.25predicted protein [Fibroporia radiculosa] >gi|4034... [more]
gi|953494866|emb|CEG43507.1|1.197e-2948.15RxLR-like protein [Plasmopara halstedii][more]
gi|1214711563|gb|OWZ22564.1|2.939e-2948.15Signal peptidase I [Phytophthora megakarya][more]
gi|1173935718|gb|OQR86793.1|4.065e-2941.94mitochondrial inner membrane protease subunit [Ach... [more]
gi|1045913603|gb|OCH90709.1|4.291e-2941.57LexA/Signal peptidase [Obba rivulosa][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8646rna8646Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications