EWM22027.1, cds8616 (CDS) Nannochloropsis gaditana

Overview
NameEWM22027.1
Unique Namecds8616
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:492055..492200 +
Alignment locationKK037249.1:492337..492373 +
Alignment locationKK037249.1:492561..492798 +
Alignment locationKK037249.1:492855..493015 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22027.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100052g7.1152.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:492055..492200 +
KK037249.1supercontigKK037249.1:492337..492373 +
KK037249.1supercontigKK037249.1:492561..492798 +
KK037249.1supercontigKK037249.1:492855..493015 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM22027.1 vs. NCBI_GenBank
Match: gi|585102442|gb|EWM22027.1| (hypothetical protein Naga_100052g7 [Nannochloropsis gaditana])

HSP 1 Score: 395.201 bits (1014), Expect = 3.107e-139
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0 
Query:    1 MIVEMQLQPESGNMCTYLSYLITNAQLVMTESIGYSAEVLLKPSGVLVRDHRALSPETLLFFILLLTSLPSASEFSPPSPPLVASFSIRKPSQRITITSICSKLTPAFFEACKSLVAFPYDDGSICRLHLISTFGSTEKNATSTTMCVTVGWGQKSQPAVVLRAQLDRLLPVVRSLGGAAFENLKQTRAWEDA 193
            MIVEMQLQPESGNMCTYLSYLITNAQLVMTESIGYSAEVLLKPSGVLVRDHRALSPETLLFFILLLTSLPSASEFSPPSPPLVASFSIRKPSQRITITSICSKLTPAFFEACKSLVAFPYDDGSICRLHLISTFGSTEKNATSTTMCVTVGWGQKSQPAVVLRAQLDRLLPVVRSLGGAAFENLKQTRAWEDA
Sbjct:    1 MIVEMQLQPESGNMCTYLSYLITNAQLVMTESIGYSAEVLLKPSGVLVRDHRALSPETLLFFILLLTSLPSASEFSPPSPPLVASFSIRKPSQRITITSICSKLTPAFFEACKSLVAFPYDDGSICRLHLISTFGSTEKNATSTTMCVTVGWGQKSQPAVVLRAQLDRLLPVVRSLGGAAFENLKQTRAWEDA 193
The following BLAST results are available for this feature:
BLAST of EWM22027.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102442|gb|EWM22027.1|3.107e-139100.00hypothetical protein Naga_100052g7 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8643rna8643Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications