EWM22049.1, cds8612 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22049.1 vs. NCBI_GenBank
Match: gi|585102464|gb|EWM22049.1| (Uncharacterized protein family UPF0153 [Nannochloropsis gaditana]) HSP 1 Score: 652.899 bits (1683), Expect = 0.000e+0 Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0
Query: 1 MKITSVAAVLVTMGPAAVHSFPLSFRPVSSFSGPALPPVTRQCLAREGRRRPFDGPQPLRSGTSSHSAEEREASSRDDVDSRATPVPKPKPFISRRVRRGPIGAATSGIDGASKSSRQVNGSTAIHNKSVTPTSTPAVLKVSKKWACVANCGACCYLAPSERPYLLDYFDDPKDLAAYNSMVGDDGWCIHYDKAARACTVFEDRPWFCRVEGKTFEKMYGVTGSEMDKFCTSCCREQIADVYGTTSGEMLSFNMAIKHLKASAGDARSERSKGAGGFGKGARAVDEAVGEPVAPIVPIDPFTNEASDKEAAMADWIGS 318
MKITSVAAVLVTMGPAAVHSFPLSFRPVSSFSGPALPPVTRQCLAREGRRRPFDGPQPLRSGTSSHSAEEREASSRDDVDSRATPVPKPKPFISRRVRRGPIGAATSGIDGASKSSRQVNGSTAIHNKSVTPTSTPAVLKVSKKWACVANCGACCYLAPSERPYLLDYFDDPKDLAAYNSMVGDDGWCIHYDKAARACTVFEDRPWFCRVEGKTFEKMYGVTGSEMDKFCTSCCREQIADVYGTTSGEMLSFNMAIKHLKASAGDARSERSKGAGGFGKGARAVDEAVGEPVAPIVPIDPFTNEASDKEAAMADWIGS
Sbjct: 1 MKITSVAAVLVTMGPAAVHSFPLSFRPVSSFSGPALPPVTRQCLAREGRRRPFDGPQPLRSGTSSHSAEEREASSRDDVDSRATPVPKPKPFISRRVRRGPIGAATSGIDGASKSSRQVNGSTAIHNKSVTPTSTPAVLKVSKKWACVANCGACCYLAPSERPYLLDYFDDPKDLAAYNSMVGDDGWCIHYDKAARACTVFEDRPWFCRVEGKTFEKMYGVTGSEMDKFCTSCCREQIADVYGTTSGEMLSFNMAIKHLKASAGDARSERSKGAGGFGKGARAVDEAVGEPVAPIVPIDPFTNEASDKEAAMADWIGS 318
BLAST of EWM22049.1 vs. NCBI_GenBank
Match: gi|299116257|emb|CBN74606.1| (Fe-S-cluster oxidoreductase-like [Ectocarpus siliculosus]) HSP 1 Score: 169.474 bits (428), Expect = 3.340e-47 Identity = 87/165 (52.73%), Postives = 104/165 (63.03%), Query Frame = 0
Query: 111 GASKSSRQVNGSTAIHNKSVTPTST-PAV--LKVSKKWACVANCGACCYLAPSERPYLLDYFDDPKDLAAYNSMVGDDGWCIHYDKAARACTVFEDRPWFCRVEGKTFEKMYGVTGSEMDKFCTSCCREQIADVYGTTSGEMLSFNMAIKHLKASAGDARSERSK 272
G+ S R G + S +T PAV LK S +WACV NCGACCYLAP ERP L +Y DP++ Y SM G DGWC H+DK +RACTV+ DRP FCRVE +TF MYGV +MD FC+SCC EQI+DVYG S E+ FN A+ L+ R ER K
Sbjct: 97 GSRASRRSKKGRINKNTDSKGGLATAPAVVLLKRSSRWACVKNCGACCYLAPDERPDLAEYLPDPEEFDLYMSMTGSDGWCKHFDKESRACTVYSDRPRFCRVETETFGSMYGVEPEDMDDFCSSCCNEQISDVYGAESKELRVFNEALAALE------RGERPK 255
BLAST of EWM22049.1 vs. NCBI_GenBank
Match: gi|495589261|ref|WP_008313840.1| (YkgJ family cysteine cluster protein [Leptolyngbya sp. PCC 6406]) HSP 1 Score: 143.665 bits (361), Expect = 5.466e-39 Identity = 61/114 (53.51%), Postives = 82/114 (71.93%), Query Frame = 0
Query: 144 KWACVANCGACCYLAPSERPYLLDYFDDPKDLAAYNSMVGDDGWCIHYDKAARACTVFEDRPWFCRVEGKTFEKMYGVTGSEMDKFCTSCCREQIADVYGTTSGEMLSFNMAIK 257
W C+ +CGACC+L PS+RP L Y P+DLA Y S+VG DGWCIH+D R C ++EDRPWFCRV+ TF +YG+T +++D+F +CC+ QIA+VYG S EM F +AI+
Sbjct: 3 HWHCIQSCGACCHLDPSDRPDLDQYLS-PEDLAHYLSLVGADGWCIHFDADQRRCGIYEDRPWFCRVQADTFNALYGITPADLDEFAIACCQTQIAEVYGEGSDEMERFEVAIE 115
BLAST of EWM22049.1 vs. NCBI_GenBank
Match: gi|505005192|ref|WP_015192294.1| (zinc/iron-chelating domain-containing protein [Stanieria cyanosphaera] >gi|428268680|gb|AFZ34621.1| protein of unknown function UPF0153 [Stanieria cyanosphaera PCC 7437]) HSP 1 Score: 141.739 bits (356), Expect = 1.436e-38 Identity = 63/115 (54.78%), Postives = 76/115 (66.09%), Query Frame = 0
Query: 145 WACVANCGACCYLAPSERPYLLDYFDDPKDLAAYNSMVGDDGWCIHYDKAARACTVFEDRPWFCRVEGKTFEKMYGVTGSEMDKFCTSCCREQIADVYGTTSGEMLSFNMAIKHL 259
W CV NCGACCYLAPSERP L DY ++L Y SMVG DGWCI++D R C ++EDRP FCRV+ FE+MYGVT E D+F CC + I D+YG S EM +N + L
Sbjct: 4 WRCVNNCGACCYLAPSERPDLEDYLS-SEELQRYLSMVGKDGWCINFDHETRKCQIYEDRPRFCRVKSDIFEQMYGVTSEEFDEFAIDCCHQHIEDLYGANSEEMKYYNQEVYDL 117
BLAST of EWM22049.1 vs. NCBI_GenBank
Match: gi|493320572|ref|WP_006277898.1| (MULTISPECIES: zinc/iron-chelating domain-containing protein [Cylindrospermopsis] >gi|281194328|gb|EFA69285.1| protein of unknown function UPF0153 [Cylindrospermopsis raciborskii CS-505] >gi|948284160|gb|KRH98411.1| Fe-S cluster protein [Cylindrospermopsis sp. CR12] >gi|1040643875|gb|OBU76210.1| Fe-S cluster protein [Cylindrospermopsis raciborskii CS-505] >gi|1095470530|gb|OHY33544.1| Fe-S cluster protein [Cylindrospermopsis raciborskii CS-508]) HSP 1 Score: 141.739 bits (356), Expect = 1.614e-38 Identity = 60/112 (53.57%), Postives = 77/112 (68.75%), Query Frame = 0
Query: 145 WACVANCGACCYLAPSERPYLLDYFDDPKDLAAYNSMVGDDGWCIHYDKAARACTVFEDRPWFCRVEGKTFEKMYGVTGSEMDKFCTSCCREQIADVYGTTSGEMLSFNMAI 256
W CV CGACC+L PS+RPYL DY P +L+ Y +VG+DGWC+++D R CT++ DRP FCRVE KTFEKMYG+ E++ F CC +QI VYG S EM+ FN +
Sbjct: 4 WQCVKQCGACCHLDPSDRPYLSDYLS-PTELSLYLRLVGEDGWCVNFDHQTRECTIYRDRPSFCRVESKTFEKMYGIKPEELNDFAIDCCHQQIDSVYGDRSLEMIRFNQTL 114
BLAST of EWM22049.1 vs. NCBI_GenBank
Match: gi|738026804|ref|WP_035985722.1| (zinc/iron-chelating domain-containing protein [Leptolyngbya sp. KIOST-1]) HSP 1 Score: 141.354 bits (355), Expect = 1.855e-38 Identity = 64/112 (57.14%), Postives = 76/112 (67.86%), Query Frame = 0
Query: 145 WACVANCGACCYLAPSERPYLLDYFDDPKDLAAYNSMVGDDGWCIHYDKAARACTVFEDRPWFCRVEGKTFEKMYGVTGSEMDKFCTSCCREQIADVYGTTSGEMLSFNMAI 256
W CV CGACC+LAP ERP L Y D P LA Y SMVG+DGWCIHY+K R C ++ +RP FCRV TFE M+GVT ++D F CC+E IAD+YG S EM FN A+
Sbjct: 4 WQCVKTCGACCFLAPDERPDLESYLD-PDQLALYLSMVGEDGWCIHYNKGDRLCAIYPERPTFCRVTFSTFETMFGVTADQLDDFAIDCCQEHIADIYGDESPEMERFNRAV 114
BLAST of EWM22049.1 vs. NCBI_GenBank
Match: gi|1121294901|ref|WP_073606725.1| (YkgJ family cysteine cluster protein [Phormidium tenue] >gi|1115287806|gb|OKH50912.1| Fe-S cluster protein [Phormidium tenue NIES-30]) HSP 1 Score: 140.198 bits (352), Expect = 6.728e-38 Identity = 64/112 (57.14%), Postives = 76/112 (67.86%), Query Frame = 0
Query: 145 WACVANCGACCYLAPSERPYLLDYFDDPKDLAAYNSMVGDDGWCIHYDKAARACTVFEDRPWFCRVEGKTFEKMYGVTGSEMDKFCTSCCREQIADVYGTTSGEMLSFNMAI 256
W CV +CGACC+LAP ERP L Y + P LA Y SMVG+DGWCIHYD R CT++ DRP FC+V TFE M+GV E+D F CC+E IAD+YG S EM FN A+
Sbjct: 4 WQCVKSCGACCFLAPDERPDLDSYLE-PDQLALYLSMVGEDGWCIHYDAGDRLCTIYADRPSFCQVTFSTFETMFGVEADELDDFAIDCCQEHIADIYGEASPEMERFNGAV 114
BLAST of EWM22049.1 vs. NCBI_GenBank
Match: gi|496700981|ref|WP_009342524.1| (MULTISPECIES: zinc/iron-chelating domain-containing protein [Aphanizomenonaceae] >gi|281198631|gb|EFA73512.1| Protein of unknown function UPF0153 [Raphidiopsis brookii D9] >gi|1095470464|gb|OHY33482.1| Fe-S cluster protein [Cylindrospermopsis raciborskii MVCC14] >gi|1159213153|gb|OPH11357.1| zinc/iron-chelating domain-containing protein [Cylindrospermopsis raciborskii CENA302] >gi|1187454479|gb|OSO97421.1| zinc/iron-chelating domain-containing protein [Cylindrospermopsis raciborskii CENA303]) HSP 1 Score: 139.428 bits (350), Expect = 1.002e-37 Identity = 59/112 (52.68%), Postives = 77/112 (68.75%), Query Frame = 0
Query: 145 WACVANCGACCYLAPSERPYLLDYFDDPKDLAAYNSMVGDDGWCIHYDKAARACTVFEDRPWFCRVEGKTFEKMYGVTGSEMDKFCTSCCREQIADVYGTTSGEMLSFNMAI 256
W CV CGACC+L PS+RPYL DY P +L+ Y +VG+DGWC+++D+ R CT++ DRP FCRVE KTFEKMYG+ E++ F CC +QI VYG S EM+ F +
Sbjct: 4 WQCVKQCGACCHLDPSDRPYLSDYLS-PTELSLYLRLVGEDGWCVNFDRQTRECTIYRDRPSFCRVESKTFEKMYGIKPEELNDFAIDCCHQQIDSVYGDRSLEMIRFKHIL 114
BLAST of EWM22049.1 vs. NCBI_GenBank
Match: gi|763338660|ref|WP_044196983.1| (YkgJ family cysteine cluster protein [Oscillatoria acuminata]) HSP 1 Score: 139.428 bits (350), Expect = 1.620e-37 Identity = 61/112 (54.46%), Postives = 77/112 (68.75%), Query Frame = 0
Query: 145 WACVANCGACCYLAPSERPYLLDYFDDPKDLAAYNSMVGDDGWCIHYDKAARACTVFEDRPWFCRVEGKTFEKMYGVTGSEMDKFCTSCCREQIADVYGTTSGEMLSFNMAI 256
W CV CGACC+L P ERP L +Y P++LA Y SMVG DGWCIH D+ R CT+++DRP FCRV FE+MYG+ E+D+F CC++QI V+G S EML FN A+
Sbjct: 4 WRCVKQCGACCHLDPEERPELAEYLS-PEELALYLSMVGPDGWCIHLDQLNRECTIYDDRPRFCRVLPDVFEEMYGIEPEELDEFAIECCQQQIEAVHGDRSLEMLRFNQAV 114
BLAST of EWM22049.1 vs. NCBI_GenBank
Match: gi|1172433153|ref|WP_080809103.1| (zinc/iron-chelating domain-containing protein [Halomicronema hongdechloris] >gi|1209461376|gb|ASC69715.1| hypothetical protein XM38_006440 [Halomicronema hongdechloris C2206]) HSP 1 Score: 139.428 bits (350), Expect = 1.757e-37 Identity = 64/126 (50.79%), Postives = 82/126 (65.08%), Query Frame = 0
Query: 145 WACVANCGACCYLAPSERPYLLDYFDDPKDLAAYNSMVGDDGWCIHYDKAARACTVFEDRPWFCRVEGKTFEKMYGVTGSEMDKFCTSCCREQIADVYGTTSGEMLSFNMAIKHLKASAGDARSER 270
W C+ CGACC+L P +RP LD + P DLA Y S+VG DGWCIH+D A R C ++ +RP FCRVE +TFE MYG+ SE++ F CCR+QI V+G S EM FN A+ A+A SE+
Sbjct: 4 WQCIEGCGACCHLDPQDRP-DLDCYLSPADLALYLSLVGADGWCIHFDHATRRCRIYAERPGFCRVEAETFEAMYGIDSSELNAFAIDCCRQQITAVHGAHSAEMERFNTAVDDNAANAQGYHSEK 128 The following BLAST results are available for this feature:
BLAST of EWM22049.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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