EWM22049.1, cds8612 (CDS) Nannochloropsis gaditana

Overview
NameEWM22049.1
Unique Namecds8612
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:485575..486531 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22049.1
ProductUncharacterized protein family UPF0153
Orig transcript idgnl|cribi|Naga_100052g2.1174.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:485575..486531 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR005358Puta_zinc/iron-chelating_dom
Homology
BLAST of EWM22049.1 vs. NCBI_GenBank
Match: gi|585102464|gb|EWM22049.1| (Uncharacterized protein family UPF0153 [Nannochloropsis gaditana])

HSP 1 Score: 652.899 bits (1683), Expect = 0.000e+0
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0
Query:    1 MKITSVAAVLVTMGPAAVHSFPLSFRPVSSFSGPALPPVTRQCLAREGRRRPFDGPQPLRSGTSSHSAEEREASSRDDVDSRATPVPKPKPFISRRVRRGPIGAATSGIDGASKSSRQVNGSTAIHNKSVTPTSTPAVLKVSKKWACVANCGACCYLAPSERPYLLDYFDDPKDLAAYNSMVGDDGWCIHYDKAARACTVFEDRPWFCRVEGKTFEKMYGVTGSEMDKFCTSCCREQIADVYGTTSGEMLSFNMAIKHLKASAGDARSERSKGAGGFGKGARAVDEAVGEPVAPIVPIDPFTNEASDKEAAMADWIGS 318
            MKITSVAAVLVTMGPAAVHSFPLSFRPVSSFSGPALPPVTRQCLAREGRRRPFDGPQPLRSGTSSHSAEEREASSRDDVDSRATPVPKPKPFISRRVRRGPIGAATSGIDGASKSSRQVNGSTAIHNKSVTPTSTPAVLKVSKKWACVANCGACCYLAPSERPYLLDYFDDPKDLAAYNSMVGDDGWCIHYDKAARACTVFEDRPWFCRVEGKTFEKMYGVTGSEMDKFCTSCCREQIADVYGTTSGEMLSFNMAIKHLKASAGDARSERSKGAGGFGKGARAVDEAVGEPVAPIVPIDPFTNEASDKEAAMADWIGS
Sbjct:    1 MKITSVAAVLVTMGPAAVHSFPLSFRPVSSFSGPALPPVTRQCLAREGRRRPFDGPQPLRSGTSSHSAEEREASSRDDVDSRATPVPKPKPFISRRVRRGPIGAATSGIDGASKSSRQVNGSTAIHNKSVTPTSTPAVLKVSKKWACVANCGACCYLAPSERPYLLDYFDDPKDLAAYNSMVGDDGWCIHYDKAARACTVFEDRPWFCRVEGKTFEKMYGVTGSEMDKFCTSCCREQIADVYGTTSGEMLSFNMAIKHLKASAGDARSERSKGAGGFGKGARAVDEAVGEPVAPIVPIDPFTNEASDKEAAMADWIGS 318          
BLAST of EWM22049.1 vs. NCBI_GenBank
Match: gi|299116257|emb|CBN74606.1| (Fe-S-cluster oxidoreductase-like [Ectocarpus siliculosus])

HSP 1 Score: 169.474 bits (428), Expect = 3.340e-47
Identity = 87/165 (52.73%), Postives = 104/165 (63.03%), Query Frame = 0
Query:  111 GASKSSRQVNGSTAIHNKSVTPTST-PAV--LKVSKKWACVANCGACCYLAPSERPYLLDYFDDPKDLAAYNSMVGDDGWCIHYDKAARACTVFEDRPWFCRVEGKTFEKMYGVTGSEMDKFCTSCCREQIADVYGTTSGEMLSFNMAIKHLKASAGDARSERSK 272
            G+  S R   G    +  S    +T PAV  LK S +WACV NCGACCYLAP ERP L +Y  DP++   Y SM G DGWC H+DK +RACTV+ DRP FCRVE +TF  MYGV   +MD FC+SCC EQI+DVYG  S E+  FN A+  L+      R ER K
Sbjct:   97 GSRASRRSKKGRINKNTDSKGGLATAPAVVLLKRSSRWACVKNCGACCYLAPDERPDLAEYLPDPEEFDLYMSMTGSDGWCKHFDKESRACTVYSDRPRFCRVETETFGSMYGVEPEDMDDFCSSCCNEQISDVYGAESKELRVFNEALAALE------RGERPK 255          
BLAST of EWM22049.1 vs. NCBI_GenBank
Match: gi|495589261|ref|WP_008313840.1| (YkgJ family cysteine cluster protein [Leptolyngbya sp. PCC 6406])

HSP 1 Score: 143.665 bits (361), Expect = 5.466e-39
Identity = 61/114 (53.51%), Postives = 82/114 (71.93%), Query Frame = 0
Query:  144 KWACVANCGACCYLAPSERPYLLDYFDDPKDLAAYNSMVGDDGWCIHYDKAARACTVFEDRPWFCRVEGKTFEKMYGVTGSEMDKFCTSCCREQIADVYGTTSGEMLSFNMAIK 257
             W C+ +CGACC+L PS+RP L  Y   P+DLA Y S+VG DGWCIH+D   R C ++EDRPWFCRV+  TF  +YG+T +++D+F  +CC+ QIA+VYG  S EM  F +AI+
Sbjct:    3 HWHCIQSCGACCHLDPSDRPDLDQYLS-PEDLAHYLSLVGADGWCIHFDADQRRCGIYEDRPWFCRVQADTFNALYGITPADLDEFAIACCQTQIAEVYGEGSDEMERFEVAIE 115          
BLAST of EWM22049.1 vs. NCBI_GenBank
Match: gi|505005192|ref|WP_015192294.1| (zinc/iron-chelating domain-containing protein [Stanieria cyanosphaera] >gi|428268680|gb|AFZ34621.1| protein of unknown function UPF0153 [Stanieria cyanosphaera PCC 7437])

HSP 1 Score: 141.739 bits (356), Expect = 1.436e-38
Identity = 63/115 (54.78%), Postives = 76/115 (66.09%), Query Frame = 0
Query:  145 WACVANCGACCYLAPSERPYLLDYFDDPKDLAAYNSMVGDDGWCIHYDKAARACTVFEDRPWFCRVEGKTFEKMYGVTGSEMDKFCTSCCREQIADVYGTTSGEMLSFNMAIKHL 259
            W CV NCGACCYLAPSERP L DY    ++L  Y SMVG DGWCI++D   R C ++EDRP FCRV+   FE+MYGVT  E D+F   CC + I D+YG  S EM  +N  +  L
Sbjct:    4 WRCVNNCGACCYLAPSERPDLEDYLS-SEELQRYLSMVGKDGWCINFDHETRKCQIYEDRPRFCRVKSDIFEQMYGVTSEEFDEFAIDCCHQHIEDLYGANSEEMKYYNQEVYDL 117          
BLAST of EWM22049.1 vs. NCBI_GenBank
Match: gi|493320572|ref|WP_006277898.1| (MULTISPECIES: zinc/iron-chelating domain-containing protein [Cylindrospermopsis] >gi|281194328|gb|EFA69285.1| protein of unknown function UPF0153 [Cylindrospermopsis raciborskii CS-505] >gi|948284160|gb|KRH98411.1| Fe-S cluster protein [Cylindrospermopsis sp. CR12] >gi|1040643875|gb|OBU76210.1| Fe-S cluster protein [Cylindrospermopsis raciborskii CS-505] >gi|1095470530|gb|OHY33544.1| Fe-S cluster protein [Cylindrospermopsis raciborskii CS-508])

HSP 1 Score: 141.739 bits (356), Expect = 1.614e-38
Identity = 60/112 (53.57%), Postives = 77/112 (68.75%), Query Frame = 0
Query:  145 WACVANCGACCYLAPSERPYLLDYFDDPKDLAAYNSMVGDDGWCIHYDKAARACTVFEDRPWFCRVEGKTFEKMYGVTGSEMDKFCTSCCREQIADVYGTTSGEMLSFNMAI 256
            W CV  CGACC+L PS+RPYL DY   P +L+ Y  +VG+DGWC+++D   R CT++ DRP FCRVE KTFEKMYG+   E++ F   CC +QI  VYG  S EM+ FN  +
Sbjct:    4 WQCVKQCGACCHLDPSDRPYLSDYLS-PTELSLYLRLVGEDGWCVNFDHQTRECTIYRDRPSFCRVESKTFEKMYGIKPEELNDFAIDCCHQQIDSVYGDRSLEMIRFNQTL 114          
BLAST of EWM22049.1 vs. NCBI_GenBank
Match: gi|738026804|ref|WP_035985722.1| (zinc/iron-chelating domain-containing protein [Leptolyngbya sp. KIOST-1])

HSP 1 Score: 141.354 bits (355), Expect = 1.855e-38
Identity = 64/112 (57.14%), Postives = 76/112 (67.86%), Query Frame = 0
Query:  145 WACVANCGACCYLAPSERPYLLDYFDDPKDLAAYNSMVGDDGWCIHYDKAARACTVFEDRPWFCRVEGKTFEKMYGVTGSEMDKFCTSCCREQIADVYGTTSGEMLSFNMAI 256
            W CV  CGACC+LAP ERP L  Y D P  LA Y SMVG+DGWCIHY+K  R C ++ +RP FCRV   TFE M+GVT  ++D F   CC+E IAD+YG  S EM  FN A+
Sbjct:    4 WQCVKTCGACCFLAPDERPDLESYLD-PDQLALYLSMVGEDGWCIHYNKGDRLCAIYPERPTFCRVTFSTFETMFGVTADQLDDFAIDCCQEHIADIYGDESPEMERFNRAV 114          
BLAST of EWM22049.1 vs. NCBI_GenBank
Match: gi|1121294901|ref|WP_073606725.1| (YkgJ family cysteine cluster protein [Phormidium tenue] >gi|1115287806|gb|OKH50912.1| Fe-S cluster protein [Phormidium tenue NIES-30])

HSP 1 Score: 140.198 bits (352), Expect = 6.728e-38
Identity = 64/112 (57.14%), Postives = 76/112 (67.86%), Query Frame = 0
Query:  145 WACVANCGACCYLAPSERPYLLDYFDDPKDLAAYNSMVGDDGWCIHYDKAARACTVFEDRPWFCRVEGKTFEKMYGVTGSEMDKFCTSCCREQIADVYGTTSGEMLSFNMAI 256
            W CV +CGACC+LAP ERP L  Y + P  LA Y SMVG+DGWCIHYD   R CT++ DRP FC+V   TFE M+GV   E+D F   CC+E IAD+YG  S EM  FN A+
Sbjct:    4 WQCVKSCGACCFLAPDERPDLDSYLE-PDQLALYLSMVGEDGWCIHYDAGDRLCTIYADRPSFCQVTFSTFETMFGVEADELDDFAIDCCQEHIADIYGEASPEMERFNGAV 114          
BLAST of EWM22049.1 vs. NCBI_GenBank
Match: gi|496700981|ref|WP_009342524.1| (MULTISPECIES: zinc/iron-chelating domain-containing protein [Aphanizomenonaceae] >gi|281198631|gb|EFA73512.1| Protein of unknown function UPF0153 [Raphidiopsis brookii D9] >gi|1095470464|gb|OHY33482.1| Fe-S cluster protein [Cylindrospermopsis raciborskii MVCC14] >gi|1159213153|gb|OPH11357.1| zinc/iron-chelating domain-containing protein [Cylindrospermopsis raciborskii CENA302] >gi|1187454479|gb|OSO97421.1| zinc/iron-chelating domain-containing protein [Cylindrospermopsis raciborskii CENA303])

HSP 1 Score: 139.428 bits (350), Expect = 1.002e-37
Identity = 59/112 (52.68%), Postives = 77/112 (68.75%), Query Frame = 0
Query:  145 WACVANCGACCYLAPSERPYLLDYFDDPKDLAAYNSMVGDDGWCIHYDKAARACTVFEDRPWFCRVEGKTFEKMYGVTGSEMDKFCTSCCREQIADVYGTTSGEMLSFNMAI 256
            W CV  CGACC+L PS+RPYL DY   P +L+ Y  +VG+DGWC+++D+  R CT++ DRP FCRVE KTFEKMYG+   E++ F   CC +QI  VYG  S EM+ F   +
Sbjct:    4 WQCVKQCGACCHLDPSDRPYLSDYLS-PTELSLYLRLVGEDGWCVNFDRQTRECTIYRDRPSFCRVESKTFEKMYGIKPEELNDFAIDCCHQQIDSVYGDRSLEMIRFKHIL 114          
BLAST of EWM22049.1 vs. NCBI_GenBank
Match: gi|763338660|ref|WP_044196983.1| (YkgJ family cysteine cluster protein [Oscillatoria acuminata])

HSP 1 Score: 139.428 bits (350), Expect = 1.620e-37
Identity = 61/112 (54.46%), Postives = 77/112 (68.75%), Query Frame = 0
Query:  145 WACVANCGACCYLAPSERPYLLDYFDDPKDLAAYNSMVGDDGWCIHYDKAARACTVFEDRPWFCRVEGKTFEKMYGVTGSEMDKFCTSCCREQIADVYGTTSGEMLSFNMAI 256
            W CV  CGACC+L P ERP L +Y   P++LA Y SMVG DGWCIH D+  R CT+++DRP FCRV    FE+MYG+   E+D+F   CC++QI  V+G  S EML FN A+
Sbjct:    4 WRCVKQCGACCHLDPEERPELAEYLS-PEELALYLSMVGPDGWCIHLDQLNRECTIYDDRPRFCRVLPDVFEEMYGIEPEELDEFAIECCQQQIEAVHGDRSLEMLRFNQAV 114          
BLAST of EWM22049.1 vs. NCBI_GenBank
Match: gi|1172433153|ref|WP_080809103.1| (zinc/iron-chelating domain-containing protein [Halomicronema hongdechloris] >gi|1209461376|gb|ASC69715.1| hypothetical protein XM38_006440 [Halomicronema hongdechloris C2206])

HSP 1 Score: 139.428 bits (350), Expect = 1.757e-37
Identity = 64/126 (50.79%), Postives = 82/126 (65.08%), Query Frame = 0
Query:  145 WACVANCGACCYLAPSERPYLLDYFDDPKDLAAYNSMVGDDGWCIHYDKAARACTVFEDRPWFCRVEGKTFEKMYGVTGSEMDKFCTSCCREQIADVYGTTSGEMLSFNMAIKHLKASAGDARSER 270
            W C+  CGACC+L P +RP  LD +  P DLA Y S+VG DGWCIH+D A R C ++ +RP FCRVE +TFE MYG+  SE++ F   CCR+QI  V+G  S EM  FN A+    A+A    SE+
Sbjct:    4 WQCIEGCGACCHLDPQDRP-DLDCYLSPADLALYLSLVGADGWCIHFDHATRRCRIYAERPGFCRVEAETFEAMYGIDSSELNAFAIDCCRQQITAVHGAHSAEMERFNTAVDDNAANAQGYHSEK 128          
The following BLAST results are available for this feature:
BLAST of EWM22049.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102464|gb|EWM22049.1|0.000e+0100.00Uncharacterized protein family UPF0153 [Nannochlor... [more]
gi|299116257|emb|CBN74606.1|3.340e-4752.73Fe-S-cluster oxidoreductase-like [Ectocarpus silic... [more]
gi|495589261|ref|WP_008313840.1|5.466e-3953.51YkgJ family cysteine cluster protein [Leptolyngbya... [more]
gi|505005192|ref|WP_015192294.1|1.436e-3854.78zinc/iron-chelating domain-containing protein [Sta... [more]
gi|493320572|ref|WP_006277898.1|1.614e-3853.57MULTISPECIES: zinc/iron-chelating domain-containin... [more]
gi|738026804|ref|WP_035985722.1|1.855e-3857.14zinc/iron-chelating domain-containing protein [Lep... [more]
gi|1121294901|ref|WP_073606725.1|6.728e-3857.14YkgJ family cysteine cluster protein [Phormidium t... [more]
gi|496700981|ref|WP_009342524.1|1.002e-3752.68MULTISPECIES: zinc/iron-chelating domain-containin... [more]
gi|763338660|ref|WP_044196983.1|1.620e-3754.46YkgJ family cysteine cluster protein [Oscillatoria... [more]
gi|1172433153|ref|WP_080809103.1|1.757e-3750.79zinc/iron-chelating domain-containing protein [Hal... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8639rna8639Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications